RNA–Protein interactions for RNA: ENST00000471538.1

SPEN-204, Transcript of spen family transcriptional repressor, humanhuman

TSL 2

Gene SPEN, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-204ENST00000471538 CDC42BPAQ5VT25 1732 aa9.27□□□□□ -0.93
SPEN-204ENST00000471538 NEUROD1Q13562 356 aa9.27□□□□□ -0.93
SPEN-204ENST00000471538 ADGBQ8N7X0 1667 aa9.27□□□□□ -0.93
SPEN-204ENST00000471538 ADGRL2O95490 1459 aa9.27□□□□□ -0.93
SPEN-204ENST00000471538 PPP1R15AO75807 674 aaPredicted RBP9.26□□□□□ -0.93
SPEN-204ENST00000471538 ZNF579Q8NAF0 562 aaKnown RBP9.26□□□□□ -0.93
SPEN-204ENST00000471538 FBXO41Q8TF61 875 aa9.26□□□□□ -0.93
SPEN-204ENST00000471538 DCBLD2Q96PD2 775 aa9.26□□□□□ -0.93
SPEN-204ENST00000471538 RRP7BPQ9NSQ0 103 aa9.26□□□□□ -0.93
SPEN-204ENST00000471538 OTUD5Q96G74 571 aa9.25□□□□□ -0.93
SPEN-204ENST00000471538 TEX14Q8IWB6 1497 aa9.25□□□□□ -0.93
SPEN-204ENST00000471538 ZNF644Q9H582 1327 aaPredicted RBP9.25□□□□□ -0.93
SPEN-204ENST00000471538 CHIC2Q9UKJ5 165 aa9.24□□□□□ -0.93
SPEN-204ENST00000471538 CENPBP07199 599 aaPredicted RBP9.23□□□□□ -0.93
SPEN-204ENST00000471538 SHANK2Q9UPX8 1470 aa9.23□□□□□ -0.93
SPEN-204ENST00000471538 POTEB2H3BUK9 544 aa9.22□□□□□ -0.93
SPEN-204ENST00000471538 TONSLQ96HA7 1378 aa9.22□□□□□ -0.93
SPEN-204ENST00000471538 NCOA1Q15788 1441 aa9.21□□□□□ -0.93
SPEN-204ENST00000471538 WDR7Q9Y4E6 1490 aa9.21□□□□□ -0.93
SPEN-204ENST00000471538 CFDP1Q9UEE9 299 aaPredicted RBP9.21□□□□□ -0.94
SPEN-204ENST00000471538 ARHGEF5Q12774 1597 aa9.21□□□□□ -0.94
SPEN-204ENST00000471538 PZPP20742 1482 aa9.2□□□□□ -0.94
SPEN-204ENST00000471538 PREX2Q70Z35 1606 aa9.2□□□□□ -0.94
SPEN-204ENST00000471538 MPHOSPH9Q99550 1183 aa9.2□□□□□ -0.94
SPEN-204ENST00000471538 PLEKHD1A6NEE1 506 aa9.19□□□□□ -0.94
SPEN-204ENST00000471538 ADAMTSL3P82987 1691 aa9.19□□□□□ -0.94
SPEN-204ENST00000471538 CDC42BPBQ9Y5S2 1711 aa9.19□□□□□ -0.94
SPEN-204ENST00000471538 ANKRD30BQ9BXX2 1392 aa9.18□□□□□ -0.94
SPEN-204ENST00000471538 CD109Q6YHK3 1445 aa9.18□□□□□ -0.94
SPEN-204ENST00000471538 RPRD2Q5VT52 1461 aaKnown RBP9.18□□□□□ -0.94
SPEN-204ENST00000471538 GALR2O43603 387 aaPredicted RBP9.18□□□□□ -0.94
SPEN-204ENST00000471538 SAMD9LQ8IVG5 1584 aa9.18□□□□□ -0.94
SPEN-204ENST00000471538 PTPRMP28827 1452 aa9.17□□□□□ -0.94
SPEN-204ENST00000471538 MBD5Q9P267 1494 aa9.17□□□□□ -0.94
SPEN-204ENST00000471538 KDM5DQ9BY66 1539 aa9.17□□□□□ -0.94
SPEN-204ENST00000471538 ZRANB1Q9UGI0 708 aa9.17□□□□□ -0.94
SPEN-204ENST00000471538 TRIM52Q96A61 297 aa9.16□□□□□ -0.94
SPEN-204ENST00000471538 C9orf84Q5VXU9 1444 aa9.16□□□□□ -0.94
SPEN-204ENST00000471538 TTC37Q6PGP7 1564 aa9.16□□□□□ -0.94
SPEN-204ENST00000471538 ANKRD30AQ9BXX3 1397 aa9.15□□□□□ -0.94
SPEN-204ENST00000471538 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.15□□□□□ -0.94
SPEN-204ENST00000471538 MAST1Q9Y2H9 1570 aa9.15□□□□□ -0.94
SPEN-204ENST00000471538 POTEMA6NI47 508 aa9.14□□□□□ -0.95
SPEN-204ENST00000471538 KCNH8Q96L42 1107 aa9.14□□□□□ -0.95
SPEN-204ENST00000471538 CREBZFQ9NS37 354 aa9.14□□□□□ -0.95
SPEN-204ENST00000471538 ARAP3Q8WWN8 1544 aa9.14□□□□□ -0.95
SPEN-204ENST00000471538 YTHDC1Q96MU7 727 aaKnown RBP9.14□□□□□ -0.95
SPEN-204ENST00000471538 ANKRD50Q9ULJ7 1429 aa9.13□□□□□ -0.95
SPEN-204ENST00000471538 CCDC141Q6ZP82 1450 aa9.13□□□□□ -0.95
SPEN-204ENST00000471538 LMTK3Q96Q04 1460 aa9.13□□□□□ -0.95
SPEN-204ENST00000471538 MADDQ8WXG6 1647 aa9.13□□□□□ -0.95
SPEN-204ENST00000471538 MYO5CQ9NQX4 1742 aa9.13□□□□□ -0.95
SPEN-204ENST00000471538 ZNF777Q9ULD5 760 aaPredicted RBP9.13□□□□□ -0.95
SPEN-204ENST00000471538 KIAA1107Q9UPP5 1409 aa9.13□□□□□ -0.95
SPEN-204ENST00000471538 BCORL1Q5H9F3 1711 aa9.12□□□□□ -0.95
SPEN-204ENST00000471538 GTF3C3Q9Y5Q9 886 aa9.12□□□□□ -0.95
SPEN-204ENST00000471538 FRMPD1Q5SYB0 1578 aa9.11□□□□□ -0.95
SPEN-204ENST00000471538 POTEGQ6S5H5 508 aa9.11□□□□□ -0.95
SPEN-204ENST00000471538 L3MBTL2Q969R5 705 aa9.11□□□□□ -0.95
SPEN-204ENST00000471538 PLXNC1O60486 1568 aa9.1□□□□□ -0.95
SPEN-204ENST00000471538 SYCP2Q9BX26 1530 aa9.1□□□□□ -0.95
SPEN-204ENST00000471538 DDX10Q13206 875 aaKnown RBP9.1□□□□□ -0.95
SPEN-204ENST00000471538 ILDR2Q71H61 639 aa9.1□□□□□ -0.95
SPEN-204ENST00000471538 KIF15Q9NS87 1388 aa9.09□□□□□ -0.95
SPEN-204ENST00000471538 RAPGEF3O95398 923 aa9.09□□□□□ -0.95
SPEN-204ENST00000471538 HIRIP3Q9BW71 556 aaPredicted RBP9.09□□□□□ -0.95
SPEN-204ENST00000471538 UNC13BO14795 1591 aa9.09□□□□□ -0.95
SPEN-204ENST00000471538 ARHGAP5Q13017 1502 aa9.09□□□□□ -0.95
SPEN-204ENST00000471538 PLEKHH2Q8IVE3 1493 aa9.09□□□□□ -0.95
SPEN-204ENST00000471538 RSPH4AQ5TD94 716 aa9.08□□□□□ -0.96
SPEN-204ENST00000471538 PELP1Q8IZL8 1130 aaKnown RBP9.08□□□□□ -0.96
SPEN-204ENST00000471538 RIMS1Q86UR5 1692 aaKnown RBP9.08□□□□□ -0.96
SPEN-204ENST00000471538 ABCA9Q8IUA7 1624 aa9.08□□□□□ -0.96
SPEN-204ENST00000471538 POLR1AO95602 1720 aaPredicted RBP9.07□□□□□ -0.96
SPEN-204ENST00000471538 SIGLEC1Q9BZZ2 1709 aa9.07□□□□□ -0.96
SPEN-204ENST00000471538 HNRNPMP52272 730 aaKnown RBP eCLIP9.07□□□□□ -0.96
SPEN-204ENST00000471538 HSPA2P54652 639 aa9.07□□□□□ -0.96
SPEN-204ENST00000471538 PLCH2O75038 1416 aa9.07□□□□□ -0.96
SPEN-204ENST00000471538 SPATA31E1Q6ZUB1 1445 aa9.07□□□□□ -0.96
SPEN-204ENST00000471538 ABCC1P33527 1531 aa9.07□□□□□ -0.96
SPEN-204ENST00000471538 ARHGEF12Q9NZN5 1544 aa9.07□□□□□ -0.96
SPEN-204ENST00000471538 TSPY4P0CV99 314 aa9.06□□□□□ -0.96
SPEN-204ENST00000471538 TSPY10P0CW01 314 aa9.06□□□□□ -0.96
SPEN-204ENST00000471538 HSPA5P11021 654 aaKnown RBP9.06□□□□□ -0.96
SPEN-204ENST00000471538 NBPF8Q3BBV2 869 aa9.06□□□□□ -0.96
SPEN-204ENST00000471538 MAGI2Q86UL8 1455 aa9.06□□□□□ -0.96
SPEN-204ENST00000471538 UHRF1BP1Q6BDS2 1440 aa9.05□□□□□ -0.96
SPEN-204ENST00000471538 NUP155O75694 1391 aa9.05□□□□□ -0.96
SPEN-204ENST00000471538 FAM135AQ9P2D6 1515 aa9.05□□□□□ -0.96
SPEN-204ENST00000471538 WASHC2AQ641Q2 1341 aa9.05□□□□□ -0.96
SPEN-204ENST00000471538 CCER2I3L3R5 266 aa9.05□□□□□ -0.96
SPEN-204ENST00000471538 PKD2Q13563 968 aa9.05□□□□□ -0.96
SPEN-204ENST00000471538 PCDH10Q9P2E7 1040 aa9.05□□□□□ -0.96
SPEN-204ENST00000471538 IQGAP3Q86VI3 1631 aa9.04□□□□□ -0.96
SPEN-204ENST00000471538 EIF4G2P78344 907 aaKnown RBP eCLIP9.04□□□□□ -0.96
SPEN-204ENST00000471538 CERKQ8TCT0 537 aa9.04□□□□□ -0.96
SPEN-204ENST00000471538 ARHGEF40Q8TER5 1519 aa9.03□□□□□ -0.96
SPEN-204ENST00000471538 DUOX2Q9NRD8 1548 aa9.03□□□□□ -0.96
SPEN-204ENST00000471538 POTEJP0CG39 1038 aa9.03□□□□□ -0.96
SPEN-204ENST00000471538 PHF12Q96QT6 1004 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms