RNA–Protein interactions for RNA: ENST00000470563.5

RBM39-227, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 384 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-227ENST00000470563 RBM27Q9P2N5 1060 aaKnown RBP10.77□□□□□ -0.69
RBM39-227ENST00000470563 ARXQ96QS3 562 aa10.76□□□□□ -0.69
RBM39-227ENST00000470563 ZSWIM6Q9HCJ5 1215 aa10.76□□□□□ -0.69
RBM39-227ENST00000470563 FOSBP53539 338 aa10.74□□□□□ -0.69
RBM39-227ENST00000470563 CDHR5Q9HBB8 845 aa10.72□□□□□ -0.69
RBM39-227ENST00000470563 MAP3K7O43318 606 aa10.71□□□□□ -0.69
RBM39-227ENST00000470563 CLCN1P35523 988 aa10.71□□□□□ -0.69
RBM39-227ENST00000470563 TTC13Q8NBP0 860 aa10.71□□□□□ -0.69
RBM39-227ENST00000470563 GIGYF2Q6Y7W6 1299 aaKnown RBP10.7□□□□□ -0.7
RBM39-227ENST00000470563 DOK7Q18PE1 504 aa10.69□□□□□ -0.7
RBM39-227ENST00000470563 LHX8Q68G74 356 aa10.69□□□□□ -0.7
RBM39-227ENST00000470563 TTLL12Q14166 644 aaPredicted RBP10.68□□□□□ -0.7
RBM39-227ENST00000470563 OATP04181 439 aa10.67□□□□□ -0.7
RBM39-227ENST00000470563 GPCPD1Q9NPB8 672 aa10.67□□□□□ -0.7
RBM39-227ENST00000470563 ZDHHC16Q969W1 377 aa10.66□□□□□ -0.7
RBM39-227ENST00000470563 HOXB3P14651 431 aaPredicted RBP10.65□□□□□ -0.7
RBM39-227ENST00000470563 TSR1Q2NL82 804 aaKnown RBP10.65□□□□□ -0.7
RBM39-227ENST00000470563 SH3D19Q5HYK7 790 aa10.65□□□□□ -0.7
RBM39-227ENST00000470563 C6orf132Q5T0Z8 1188 aa10.65□□□□□ -0.7
RBM39-227ENST00000470563 PSDA5PKW4 1024 aaPredicted RBP10.64□□□□□ -0.71
RBM39-227ENST00000470563 MS4A1P11836 297 aa10.64□□□□□ -0.71
RBM39-227ENST00000470563 FLIIQ13045 1269 aa10.64□□□□□ -0.71
RBM39-227ENST00000470563 REPIN1Q9BWE0 567 aaKnown RBP10.64□□□□□ -0.71
RBM39-227ENST00000470563 RIMBP2O15034 1052 aa10.63□□□□□ -0.71
RBM39-227ENST00000470563 METTL3Q86U44 580 aaKnown RBP10.63□□□□□ -0.71
RBM39-227ENST00000470563 GPR153Q6NV75 609 aa10.62□□□□□ -0.71
RBM39-227ENST00000470563 PXYLP1Q8TE99 480 aa10.62□□□□□ -0.71
RBM39-227ENST00000470563 ZMYND15Q9H091 742 aa10.62□□□□□ -0.71
RBM39-227ENST00000470563 ADGRG1Q9Y653 693 aa10.62□□□□□ -0.71
RBM39-227ENST00000470563 ONECUT3O60422 494 aaPredicted RBP10.61□□□□□ -0.71
RBM39-227ENST00000470563 MAMSTRQ6ZN01 415 aa10.61□□□□□ -0.71
RBM39-227ENST00000470563 RBM33Q96EV2 1170 aaKnown RBP10.61□□□□□ -0.71
RBM39-227ENST00000470563 PHOX2BQ99453 314 aa10.61□□□□□ -0.71
RBM39-227ENST00000470563 RSPH6AQ9H0K4 717 aa10.6□□□□□ -0.71
RBM39-227ENST00000470563 POTEB2H3BUK9 544 aa10.59□□□□□ -0.71
RBM39-227ENST00000470563 POTEJP0CG39 1038 aa10.59□□□□□ -0.71
RBM39-227ENST00000470563 FAM217BQ9NTX9 383 aaPredicted RBP10.59□□□□□ -0.71
RBM39-227ENST00000470563 PADI6Q6TGC4 694 aa10.58□□□□□ -0.72
RBM39-227ENST00000470563 ZNF454Q8N9F8 522 aa10.58□□□□□ -0.72
RBM39-227ENST00000470563 PRSS12P56730 875 aa10.57□□□□□ -0.72
RBM39-227ENST00000470563 SKIV2LQ15477 1246 aaKnown RBP10.57□□□□□ -0.72
RBM39-227ENST00000470563 PCMTD1Q96MG8 357 aaPredicted RBP10.57□□□□□ -0.72
RBM39-227ENST00000470563 BCL2L12Q9HB09 334 aa10.57□□□□□ -0.72
RBM39-227ENST00000470563 SSTR3P32745 418 aaPredicted RBP10.56□□□□□ -0.72
RBM39-227ENST00000470563 MDM2Q00987 491 aaPredicted RBP10.56□□□□□ -0.72
RBM39-227ENST00000470563 ADAM33Q9BZ11 813 aa10.56□□□□□ -0.72
RBM39-227ENST00000470563 SCUBE2Q9NQ36 999 aa10.55□□□□□ -0.72
RBM39-227ENST00000470563 NUDT7P0C024 238 aa10.54□□□□□ -0.72
RBM39-227ENST00000470563 DIXDC1Q155Q3 683 aa10.54□□□□□ -0.72
RBM39-227ENST00000470563 RBM46Q8TBY0 533 aaKnown RBP10.54□□□□□ -0.72
RBM39-227ENST00000470563 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.53□□□□□ -0.72
RBM39-227ENST00000470563 ARSIQ5FYB1 569 aa10.53□□□□□ -0.72
RBM39-227ENST00000470563 PPP4R3BQ5MIZ7 849 aa10.53□□□□□ -0.72
RBM39-227ENST00000470563 HOMEZQ8IX15 550 aa10.53□□□□□ -0.72
RBM39-227ENST00000470563 CDCA7LQ96GN5 454 aa10.52□□□□□ -0.73
RBM39-227ENST00000470563 PPP1R3GB7ZBB8 358 aa10.51□□□□□ -0.73
RBM39-227ENST00000470563 SNPHO15079 494 aa10.51□□□□□ -0.73
RBM39-227ENST00000470563 TUSC1Q2TAM9 212 aa10.51□□□□□ -0.73
RBM39-227ENST00000470563 A6NJR5 290 aa10.5□□□□□ -0.73
RBM39-227ENST00000470563 EYA1Q99502 592 aa10.5□□□□□ -0.73
RBM39-227ENST00000470563 BEGAINQ9BUH8 593 aa10.5□□□□□ -0.73
RBM39-227ENST00000470563 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.49□□□□□ -0.73
RBM39-227ENST00000470563 HOXB1P14653 301 aaPredicted RBP10.48□□□□□ -0.73
RBM39-227ENST00000470563 ZNF710Q8N1W2 664 aa10.48□□□□□ -0.73
RBM39-227ENST00000470563 LHX6Q9UPM6 363 aa10.48□□□□□ -0.73
RBM39-227ENST00000470563 KHSRPQ92945 711 aaKnown RBP eCLIP10.47□□□□□ -0.733e-14■■■□□ 14.6
RBM39-227ENST00000470563 SOCS7O14512 581 aa10.46□□□□□ -0.73
RBM39-227ENST00000470563 PTPREP23469 700 aa10.46□□□□□ -0.73
RBM39-227ENST00000470563 GJA5P36382 358 aa10.46□□□□□ -0.73
RBM39-227ENST00000470563 OTUD5Q96G74 571 aa10.46□□□□□ -0.73
RBM39-227ENST00000470563 MYSM1Q5VVJ2 828 aa10.45□□□□□ -0.74
RBM39-227ENST00000470563 FAM198AQ9UFP1 575 aa10.45□□□□□ -0.74
RBM39-227ENST00000470563 SUPT5HO00267 1087 aaKnown RBP10.44□□□□□ -0.74
RBM39-227ENST00000470563 MCM6Q14566 821 aa10.44□□□□□ -0.74
RBM39-227ENST00000470563 NBPF26B4DH59 902 aa10.43□□□□□ -0.74
RBM39-227ENST00000470563 CD46P15529 392 aa10.43□□□□□ -0.74
RBM39-227ENST00000470563 COL9A1P20849 921 aa10.43□□□□□ -0.74
RBM39-227ENST00000470563 FAM161AQ3B820 660 aa10.43□□□□□ -0.74
RBM39-227ENST00000470563 PPP2R2DQ66LE6 453 aa10.43□□□□□ -0.74
RBM39-227ENST00000470563 SULF1Q8IWU6 871 aa10.43□□□□□ -0.74
RBM39-227ENST00000470563 BANK1Q8NDB2 785 aa10.43□□□□□ -0.74
RBM39-227ENST00000470563 RCCD1A6NED2 376 aa10.42□□□□□ -0.74
RBM39-227ENST00000470563 TRIM6-TRIM34B2RNG4 842 aa10.42□□□□□ -0.74
RBM39-227ENST00000470563 DNAJB2P25686 324 aa10.42□□□□□ -0.74
RBM39-227ENST00000470563 TSKSQ9UJT2 592 aa10.42□□□□□ -0.74
RBM39-227ENST00000470563 CLK2P49760 499 aaKnown RBP10.41□□□□□ -0.74
RBM39-227ENST00000470563 TBC1D2Q9BYX2 928 aa10.4□□□□□ -0.74
RBM39-227ENST00000470563 TMEM134Q9H6X4 195 aa10.4□□□□□ -0.74
RBM39-227ENST00000470563 PACS2Q86VP3 889 aa10.39□□□□□ -0.75
RBM39-227ENST00000470563 SLC4A5Q9BY07 1137 aa10.39□□□□□ -0.75
RBM39-227ENST00000470563 SPDYE5A6NIY4 337 aa10.38□□□□□ -0.75
RBM39-227ENST00000470563 SPTLC1O15269 473 aa10.38□□□□□ -0.75
RBM39-227ENST00000470563 TATDN2Q93075 761 aa10.37□□□□□ -0.75
RBM39-227ENST00000470563 TMEM259Q4ZIN3 620 aa10.36□□□□□ -0.75
RBM39-227ENST00000470563 PROCA1Q8NCQ7 364 aaPredicted RBP10.36□□□□□ -0.75
RBM39-227ENST00000470563 SPIRE2Q8WWL2 714 aa10.36□□□□□ -0.75
RBM39-227ENST00000470563 NUDT18Q6ZVK8 323 aa10.35□□□□□ -0.75
RBM39-227ENST00000470563 NLRP7Q8WX94 980 aa10.35□□□□□ -0.75
RBM39-227ENST00000470563 TRAK2O60296 914 aa10.33□□□□□ -0.76
RBM39-227ENST00000470563 UBTFP17480 764 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms