RNA–Protein interactions for RNA: ENST00000467371.1

SPTBN1-204, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 3,332 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-204ENST00000467371 FOXD4L6Q3SYB3 417 aaPredicted RBP10.27□□□□□ -0.76
SPTBN1-204ENST00000467371 FOXD4L3Q6VB84 417 aaPredicted RBP10.27□□□□□ -0.76
SPTBN1-204ENST00000467371 GORABQ5T7V8 394 aa10.27□□□□□ -0.77
SPTBN1-204ENST00000467371 SEMA3EO15041 775 aa10.26□□□□□ -0.77
SPTBN1-204ENST00000467371 ZNF662Q6ZS27 426 aa10.25□□□□□ -0.77
SPTBN1-204ENST00000467371 APBB1IPQ7Z5R6 666 aaPredicted RBP10.25□□□□□ -0.77
SPTBN1-204ENST00000467371 SREK1Q8WXA9 508 aaKnown RBP10.25□□□□□ -0.77
SPTBN1-204ENST00000467371 PLSCR2Q9NRY7 297 aa10.25□□□□□ -0.77
SPTBN1-204ENST00000467371 DEKP35659 375 aaKnown RBP10.25□□□□□ -0.77
SPTBN1-204ENST00000467371 FTSJ3Q8IY81 847 aaKnown RBP10.24□□□□□ -0.77
SPTBN1-204ENST00000467371 C8orf37Q96NL8 207 aa10.24□□□□□ -0.77
SPTBN1-204ENST00000467371 PDE4DQ08499 809 aa10.24□□□□□ -0.77
SPTBN1-204ENST00000467371 SND1Q7KZF4 910 aaKnown RBP eCLIP10.23□□□□□ -0.774e-10■■■■■ 50.5
SPTBN1-204ENST00000467371 EVI5LQ96CN4 794 aa10.23□□□□□ -0.77
SPTBN1-204ENST00000467371 SPINK5Q9NQ38 1064 aaPredicted RBP10.23□□□□□ -0.77
SPTBN1-204ENST00000467371 POLA2Q14181 598 aa10.23□□□□□ -0.77
SPTBN1-204ENST00000467371 MCM6Q14566 821 aa10.23□□□□□ -0.77
SPTBN1-204ENST00000467371 RALBP1Q15311 655 aa10.23□□□□□ -0.77
SPTBN1-204ENST00000467371 HNRNPUL2Q1KMD3 747 aaKnown RBP10.23□□□□□ -0.77
SPTBN1-204ENST00000467371 FAM9BQ8IZU0 186 aa10.22□□□□□ -0.77
SPTBN1-204ENST00000467371 ABCC8Q09428 1581 aa10.22□□□□□ -0.77
SPTBN1-204ENST00000467371 CADPS2Q86UW7 1296 aa10.22□□□□□ -0.77
SPTBN1-204ENST00000467371 RAB11FIP3O75154 756 aa10.22□□□□□ -0.77
SPTBN1-204ENST00000467371 GIMAP6Q6P9H5 292 aa10.22□□□□□ -0.77
SPTBN1-204ENST00000467371 TRIM66O15016 1216 aa10.21□□□□□ -0.78
SPTBN1-204ENST00000467371 RPS6KL1Q9Y6S9 549 aa10.21□□□□□ -0.78
SPTBN1-204ENST00000467371 ARHGEF1Q92888 912 aaKnown RBP10.2□□□□□ -0.78
SPTBN1-204ENST00000467371 ERCC3P19447 782 aa10.2□□□□□ -0.78
SPTBN1-204ENST00000467371 PPFIA4O75335 1185 aa10.19□□□□□ -0.78
SPTBN1-204ENST00000467371 TXNDC2Q86VQ3 553 aa10.19□□□□□ -0.78
SPTBN1-204ENST00000467371 MRRFQ96E11 262 aaKnown RBP10.19□□□□□ -0.78
SPTBN1-204ENST00000467371 TCF3P15923 654 aa10.18□□□□□ -0.78
SPTBN1-204ENST00000467371 PPP1R15AO75807 674 aaPredicted RBP10.18□□□□□ -0.78
SPTBN1-204ENST00000467371 MKRN4PQ13434 485 aaPredicted RBP10.17□□□□□ -0.78
SPTBN1-204ENST00000467371 UBA5Q9GZZ9 404 aa10.17□□□□□ -0.78
SPTBN1-204ENST00000467371 WRNQ14191 1432 aaPredicted RBP eCLIP10.17□□□□□ -0.78
SPTBN1-204ENST00000467371 TSR1Q2NL82 804 aaKnown RBP10.17□□□□□ -0.78
SPTBN1-204ENST00000467371 POM121Q96HA1 1249 aa10.17□□□□□ -0.78
SPTBN1-204ENST00000467371 GLIPR1L2Q4G1C9 344 aa10.16□□□□□ -0.78
SPTBN1-204ENST00000467371 SOGA1O94964 1423 aa10.16□□□□□ -0.78
SPTBN1-204ENST00000467371 UBXN4Q92575 508 aa10.15□□□□□ -0.78
SPTBN1-204ENST00000467371 CCDC88BA6NC98 1476 aa10.15□□□□□ -0.78
SPTBN1-204ENST00000467371 PHF14O94880 888 aa10.15□□□□□ -0.79
SPTBN1-204ENST00000467371 FAM193AP78312 1265 aa10.14□□□□□ -0.79
SPTBN1-204ENST00000467371 CDCA7Q9BWT1 371 aaPredicted RBP10.14□□□□□ -0.79
SPTBN1-204ENST00000467371 MORC4Q8TE76 937 aa10.13□□□□□ -0.79
SPTBN1-204ENST00000467371 MAP4K4O95819 1239 aaPredicted RBP10.13□□□□□ -0.79
SPTBN1-204ENST00000467371 TSHZ1Q6ZSZ6 1077 aa10.13□□□□□ -0.79
SPTBN1-204ENST00000467371 MTA3Q9BTC8 594 aa10.13□□□□□ -0.79
SPTBN1-204ENST00000467371 ITGAEP38570 1179 aa10.13□□□□□ -0.79
SPTBN1-204ENST00000467371 IVNS1ABPQ9Y6Y0 642 aa10.13□□□□□ -0.79
SPTBN1-204ENST00000467371 MYBPC2Q14324 1141 aa10.12□□□□□ -0.79
SPTBN1-204ENST00000467371 MAMSTRQ6ZN01 415 aa10.12□□□□□ -0.79
SPTBN1-204ENST00000467371 SMC5Q8IY18 1101 aa10.12□□□□□ -0.79
SPTBN1-204ENST00000467371 CHMP4BQ9H444 224 aaKnown RBP10.12□□□□□ -0.79
SPTBN1-204ENST00000467371 UNC13AQ9UPW8 1703 aa10.12□□□□□ -0.79
SPTBN1-204ENST00000467371 RUSC2Q8N2Y8 1516 aa10.11□□□□□ -0.79
SPTBN1-204ENST00000467371 LONRF3Q496Y0 759 aa10.11□□□□□ -0.79
SPTBN1-204ENST00000467371 RBM26Q5T8P6 1007 aaKnown RBP10.11□□□□□ -0.79
SPTBN1-204ENST00000467371 ATP1B4Q9UN42 357 aaPredicted RBP10.11□□□□□ -0.79
SPTBN1-204ENST00000467371 FOXD4Q12950 439 aaPredicted RBP10.1□□□□□ -0.79
SPTBN1-204ENST00000467371 GPATCH3Q96I76 525 aa10.1□□□□□ -0.79
SPTBN1-204ENST00000467371 GOPCQ9HD26 462 aa10.1□□□□□ -0.79
SPTBN1-204ENST00000467371 CIZ1Q9ULV3 898 aaPredicted RBP10.1□□□□□ -0.79
SPTBN1-204ENST00000467371 RINLQ6ZS11 566 aa10.1□□□□□ -0.79
SPTBN1-204ENST00000467371 RBM46Q8TBY0 533 aaKnown RBP10.1□□□□□ -0.79
SPTBN1-204ENST00000467371 PEX14O75381 377 aa10.09□□□□□ -0.79
SPTBN1-204ENST00000467371 SKIV2LQ15477 1246 aaKnown RBP10.09□□□□□ -0.79
SPTBN1-204ENST00000467371 CLEC4GQ6UXB4 293 aa10.09□□□□□ -0.79
SPTBN1-204ENST00000467371 CCDC181Q5TID7 509 aa10.08□□□□□ -0.8
SPTBN1-204ENST00000467371 KRBA2Q6ZNG9 492 aa10.08□□□□□ -0.8
SPTBN1-204ENST00000467371 MAF1Q9H063 256 aa10.08□□□□□ -0.8
SPTBN1-204ENST00000467371 SDR16C5Q8N3Y7 309 aa10.07□□□□□ -0.8
SPTBN1-204ENST00000467371 KLHL42Q9P2K6 505 aa10.07□□□□□ -0.8
SPTBN1-204ENST00000467371 APLP1P51693 650 aa10.07□□□□□ -0.8
SPTBN1-204ENST00000467371 FOSBP53539 338 aa10.07□□□□□ -0.8
SPTBN1-204ENST00000467371 DDRGK1Q96HY6 314 aa10.07□□□□□ -0.8
SPTBN1-204ENST00000467371 MAGEC2Q9UBF1 373 aaPredicted RBP10.07□□□□□ -0.8
SPTBN1-204ENST00000467371 BAZ1AQ9NRL2 1556 aaPredicted RBP10.06□□□□□ -0.8
SPTBN1-204ENST00000467371 PARNO95453 639 aaKnown RBP10.05□□□□□ -0.8
SPTBN1-204ENST00000467371 EXOC5O00471 708 aa10.04□□□□□ -0.8
SPTBN1-204ENST00000467371 CREB3O43889 395 aa10.04□□□□□ -0.8
SPTBN1-204ENST00000467371 CCDC194A0A1B0GVG4 234 aa10.04□□□□□ -0.8
SPTBN1-204ENST00000467371 METTL14Q9HCE5 456 aaKnown RBP10.04□□□□□ -0.8
SPTBN1-204ENST00000467371 USTQ9Y2C2 406 aa10.04□□□□□ -0.8
SPTBN1-204ENST00000467371 CACTIN-AS1Q8N1I8 211 aa10.03□□□□□ -0.8
SPTBN1-204ENST00000467371 PMM1Q92871 262 aa10.03□□□□□ -0.8
SPTBN1-204ENST00000467371 ZC3H6P61129 1189 aaKnown RBP10.02□□□□□ -0.8
SPTBN1-204ENST00000467371 LARGE2Q8N3Y3 721 aa10.02□□□□□ -0.8
SPTBN1-204ENST00000467371 CEP162Q5TB80 1403 aa10.02□□□□□ -0.81
SPTBN1-204ENST00000467371 SBNO2Q9Y2G9 1366 aa10.02□□□□□ -0.81
SPTBN1-204ENST00000467371 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.02□□□□□ -0.811e-20■■□□□ 12
SPTBN1-204ENST00000467371 HMGB1P1B2RPK0 211 aaPredicted RBP10.01□□□□□ -0.81
SPTBN1-204ENST00000467371 VTI1AQ96AJ9 217 aa10.01□□□□□ -0.81
SPTBN1-204ENST00000467371 EIF3JO75822 258 aaKnown RBP10.01□□□□□ -0.81
SPTBN1-204ENST00000467371 PSME1Q06323 249 aa10.01□□□□□ -0.81
SPTBN1-204ENST00000467371 ZFYVE27Q5T4F4 411 aa10.01□□□□□ -0.81
SPTBN1-204ENST00000467371 KRI1Q8N9T8 703 aaKnown RBP10.01□□□□□ -0.81
SPTBN1-204ENST00000467371 ZNF622Q969S3 477 aaKnown RBP eCLIP10.01□□□□□ -0.81
SPTBN1-204ENST00000467371 CCER2I3L3R5 266 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms