RNA–Protein interactions for RNA: ENST00000463578.1

HMGN1P8-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 8, humanhuman

BASIC

Gene HMGN1P8, Length 288 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P8-201ENST00000463578 ZNF316A6NFI3 1004 aaPredicted RBP11.77□□□□□ -0.53
HMGN1P8-201ENST00000463578 TBC1D12O60347 775 aa11.77□□□□□ -0.53
HMGN1P8-201ENST00000463578 ANO8Q9HCE9 1232 aaPredicted RBP11.77□□□□□ -0.53
HMGN1P8-201ENST00000463578 POTEB3A0JP26 581 aa11.76□□□□□ -0.53
HMGN1P8-201ENST00000463578 POTEBQ6S5H4 581 aa11.76□□□□□ -0.53
HMGN1P8-201ENST00000463578 DDRGK1Q96HY6 314 aa11.76□□□□□ -0.53
HMGN1P8-201ENST00000463578 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.75□□□□□ -0.53
HMGN1P8-201ENST00000463578 ZMYND15Q9H091 742 aa11.74□□□□□ -0.53
HMGN1P8-201ENST00000463578 NPDC1Q9NQX5 325 aaPredicted RBP11.74□□□□□ -0.53
HMGN1P8-201ENST00000463578 SLC34A2O95436 690 aa11.73□□□□□ -0.53
HMGN1P8-201ENST00000463578 REPIN1Q9BWE0 567 aaKnown RBP11.72□□□□□ -0.53
HMGN1P8-201ENST00000463578 CDHR5Q9HBB8 845 aa11.72□□□□□ -0.53
HMGN1P8-201ENST00000463578 MS4A1P11836 297 aa11.69□□□□□ -0.54
HMGN1P8-201ENST00000463578 EN1Q05925 392 aaPredicted RBP11.69□□□□□ -0.54
HMGN1P8-201ENST00000463578 TMUB1Q9BVT8 246 aa11.69□□□□□ -0.54
HMGN1P8-201ENST00000463578 KRTAP3-3Q9BYR6 98 aa11.69□□□□□ -0.54
HMGN1P8-201ENST00000463578 KRTAP3-2Q9BYR7 98 aa11.69□□□□□ -0.54
HMGN1P8-201ENST00000463578 SNPHO15079 494 aa11.68□□□□□ -0.54
HMGN1P8-201ENST00000463578 GIGYF2Q6Y7W6 1299 aaKnown RBP11.68□□□□□ -0.54
HMGN1P8-201ENST00000463578 EMP3P54852 163 aa11.67□□□□□ -0.54
HMGN1P8-201ENST00000463578 TTLL12Q14166 644 aaPredicted RBP11.67□□□□□ -0.54
HMGN1P8-201ENST00000463578 GOPCQ9HD26 462 aa11.67□□□□□ -0.54
HMGN1P8-201ENST00000463578 PHF14O94880 888 aa11.66□□□□□ -0.54
HMGN1P8-201ENST00000463578 EPAS1Q99814 870 aa11.66□□□□□ -0.54
HMGN1P8-201ENST00000463578 C3orf67Q6ZVT6 689 aa11.65□□□□□ -0.54
HMGN1P8-201ENST00000463578 PCDHGA10Q9Y5H3 936 aa11.65□□□□□ -0.54
HMGN1P8-201ENST00000463578 FAM205CA6NFA0 338 aa11.64□□□□□ -0.55
HMGN1P8-201ENST00000463578 HS3ST6Q96QI5 342 aa11.64□□□□□ -0.55
HMGN1P8-201ENST00000463578 RSPH6AQ9H0K4 717 aa11.64□□□□□ -0.55
HMGN1P8-201ENST00000463578 KDM4FA0A1W2PPD8 638 aa11.63□□□□□ -0.55
HMGN1P8-201ENST00000463578 PHOX2BQ99453 314 aa11.63□□□□□ -0.55
HMGN1P8-201ENST00000463578 ONECUT3O60422 494 aaPredicted RBP11.62□□□□□ -0.55
HMGN1P8-201ENST00000463578 TSR1Q2NL82 804 aaKnown RBP11.62□□□□□ -0.55
HMGN1P8-201ENST00000463578 MAP3K7O43318 606 aa11.61□□□□□ -0.55
HMGN1P8-201ENST00000463578 RBM33Q96EV2 1170 aaKnown RBP11.6□□□□□ -0.55
HMGN1P8-201ENST00000463578 PCDHGA4Q9Y5G9 962 aa11.6□□□□□ -0.55
HMGN1P8-201ENST00000463578 TYW1BQ6NUM6 668 aa11.58□□□□□ -0.56
HMGN1P8-201ENST00000463578 C1orf115Q9H7X2 142 aa11.57□□□□□ -0.56
HMGN1P8-201ENST00000463578 CLCN1P35523 988 aa11.56□□□□□ -0.56
HMGN1P8-201ENST00000463578 MDM2Q00987 491 aaPredicted RBP11.56□□□□□ -0.56
HMGN1P8-201ENST00000463578 FLIIQ13045 1269 aa11.55□□□□□ -0.56
HMGN1P8-201ENST00000463578 SH3D19Q5HYK7 790 aa11.55□□□□□ -0.56
HMGN1P8-201ENST00000463578 JPH4Q96JJ6 628 aa11.55□□□□□ -0.56
HMGN1P8-201ENST00000463578 GPCPD1Q9NPB8 672 aa11.55□□□□□ -0.56
HMGN1P8-201ENST00000463578 FOSBP53539 338 aa11.53□□□□□ -0.56
HMGN1P8-201ENST00000463578 FAM161AQ3B820 660 aa11.53□□□□□ -0.56
HMGN1P8-201ENST00000463578 FBXW7Q969H0 707 aa11.53□□□□□ -0.56
HMGN1P8-201ENST00000463578 PCMTD1Q96MG8 357 aaPredicted RBP11.53□□□□□ -0.56
HMGN1P8-201ENST00000463578 UBTFP17480 764 aaKnown RBP11.52□□□□□ -0.57
HMGN1P8-201ENST00000463578 SSTR3P32745 418 aaPredicted RBP11.51□□□□□ -0.57
HMGN1P8-201ENST00000463578 METTL3Q86U44 580 aaKnown RBP11.51□□□□□ -0.57
HMGN1P8-201ENST00000463578 TTC13Q8NBP0 860 aa11.51□□□□□ -0.57
HMGN1P8-201ENST00000463578 NLRP7Q8WX94 980 aa11.51□□□□□ -0.57
HMGN1P8-201ENST00000463578 FAM217BQ9NTX9 383 aaPredicted RBP11.5□□□□□ -0.57
HMGN1P8-201ENST00000463578 PADI6Q6TGC4 694 aa11.49□□□□□ -0.57
HMGN1P8-201ENST00000463578 ADGRG1Q9Y653 693 aa11.49□□□□□ -0.57
HMGN1P8-201ENST00000463578 HOXB3P14651 431 aaPredicted RBP11.48□□□□□ -0.57
HMGN1P8-201ENST00000463578 C6orf132Q5T0Z8 1188 aa11.48□□□□□ -0.57
HMGN1P8-201ENST00000463578 PXYLP1Q8TE99 480 aa11.48□□□□□ -0.57
HMGN1P8-201ENST00000463578 SKIV2LQ15477 1246 aaKnown RBP11.47□□□□□ -0.57
HMGN1P8-201ENST00000463578 BEGAINQ9BUH8 593 aa11.47□□□□□ -0.57
HMGN1P8-201ENST00000463578 OATP04181 439 aa11.45□□□□□ -0.58
HMGN1P8-201ENST00000463578 MCM6Q14566 821 aa11.45□□□□□ -0.58
HMGN1P8-201ENST00000463578 CERKQ8TCT0 537 aa11.45□□□□□ -0.58
HMGN1P8-201ENST00000463578 A6NJR5 290 aa11.44□□□□□ -0.58
HMGN1P8-201ENST00000463578 ARID3CA6NKF2 412 aa11.44□□□□□ -0.58
HMGN1P8-201ENST00000463578 PROCA1Q8NCQ7 364 aaPredicted RBP11.44□□□□□ -0.58
HMGN1P8-201ENST00000463578 ZDHHC16Q969W1 377 aa11.44□□□□□ -0.58
HMGN1P8-201ENST00000463578 ADAM33Q9BZ11 813 aa11.44□□□□□ -0.58
HMGN1P8-201ENST00000463578 RBM27Q9P2N5 1060 aaKnown RBP11.44□□□□□ -0.58
HMGN1P8-201ENST00000463578 KHSRPQ92945 711 aaKnown RBP eCLIP11.43□□□□□ -0.58
HMGN1P8-201ENST00000463578 CLUAP1Q96AJ1 413 aa11.43□□□□□ -0.58
HMGN1P8-201ENST00000463578 ZNF454Q8N9F8 522 aa11.42□□□□□ -0.58
HMGN1P8-201ENST00000463578 APBB1O00213 710 aa11.4□□□□□ -0.58
HMGN1P8-201ENST00000463578 NUDT7P0C024 238 aa11.4□□□□□ -0.58
HMGN1P8-201ENST00000463578 MYSM1Q5VVJ2 828 aa11.4□□□□□ -0.58
HMGN1P8-201ENST00000463578 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.4□□□□□ -0.58
HMGN1P8-201ENST00000463578 PRSS12P56730 875 aa11.39□□□□□ -0.59
HMGN1P8-201ENST00000463578 ARID3AQ99856 593 aa11.39□□□□□ -0.59
HMGN1P8-201ENST00000463578 POLR3EQ9NVU0 708 aa11.39□□□□□ -0.59
HMGN1P8-201ENST00000463578 FAM198AQ9UFP1 575 aa11.39□□□□□ -0.59
HMGN1P8-201ENST00000463578 TRAK2O60296 914 aa11.38□□□□□ -0.59
HMGN1P8-201ENST00000463578 ARSIQ5FYB1 569 aa11.38□□□□□ -0.59
HMGN1P8-201ENST00000463578 FBXO31Q5XUX0 539 aaPredicted RBP11.37□□□□□ -0.59
HMGN1P8-201ENST00000463578 GPR153Q6NV75 609 aa11.37□□□□□ -0.59
HMGN1P8-201ENST00000463578 CDCA7LQ96GN5 454 aa11.36□□□□□ -0.59
HMGN1P8-201ENST00000463578 HOXB1P14653 301 aaPredicted RBP11.35□□□□□ -0.59
HMGN1P8-201ENST00000463578 TBC1D2Q9BYX2 928 aa11.35□□□□□ -0.59
HMGN1P8-201ENST00000463578 ERBB3P21860 1342 aa11.34□□□□□ -0.59
HMGN1P8-201ENST00000463578 COL9A1P20849 921 aa11.33□□□□□ -0.6
HMGN1P8-201ENST00000463578 CLK2P49760 499 aaKnown RBP11.33□□□□□ -0.6
HMGN1P8-201ENST00000463578 DOK7Q18PE1 504 aa11.33□□□□□ -0.6
HMGN1P8-201ENST00000463578 C3orf80F5H4A9 247 aa11.32□□□□□ -0.6
HMGN1P8-201ENST00000463578 ZNF710Q8N1W2 664 aa11.32□□□□□ -0.6
HMGN1P8-201ENST00000463578 FNBP4Q8N3X1 1017 aaPredicted RBP11.32□□□□□ -0.6
HMGN1P8-201ENST00000463578 RBM46Q8TBY0 533 aaKnown RBP11.32□□□□□ -0.6
HMGN1P8-201ENST00000463578 RNF166Q96A37 237 aaPredicted RBP11.32□□□□□ -0.6
HMGN1P8-201ENST00000463578 POM121Q96HA1 1249 aa11.32□□□□□ -0.6
HMGN1P8-201ENST00000463578 EYA1Q99502 592 aa11.32□□□□□ -0.6
HMGN1P8-201ENST00000463578 ZSWIM6Q9HCJ5 1215 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms