RNA–Protein interactions for RNA: ENST00000463456.5

LRPPRC-206, Transcript of leucine rich pentatricopeptide repeat containing, humanhuman

TSL 2

Gene LRPPRC, Length 3,549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPPRC-206ENST00000463456 SHROOM2Q13796 1616 aa6.33□□□□□ -1.4
LRPPRC-206ENST00000463456 PLEKHH2Q8IVE3 1493 aa6.33□□□□□ -1.4
LRPPRC-206ENST00000463456 UACAQ9BZF9 1416 aa6.33□□□□□ -1.4
LRPPRC-206ENST00000463456 ZNF500O60304 480 aaPredicted RBP6.33□□□□□ -1.4
LRPPRC-206ENST00000463456 TNNT2P45379 298 aaPredicted RBP6.33□□□□□ -1.4
LRPPRC-206ENST00000463456 KIAA1211Q6ZU35 1233 aa6.33□□□□□ -1.4
LRPPRC-206ENST00000463456 ZNF830Q96NB3 372 aaPredicted RBP6.33□□□□□ -1.4
LRPPRC-206ENST00000463456 RGS22Q8NE09 1264 aa6.32□□□□□ -1.4
LRPPRC-206ENST00000463456 SPATA31E1Q6ZUB1 1445 aa6.32□□□□□ -1.4
LRPPRC-206ENST00000463456 PTPN23Q9H3S7 1636 aa6.32□□□□□ -1.4
LRPPRC-206ENST00000463456 FAM161AQ3B820 660 aa6.32□□□□□ -1.4
LRPPRC-206ENST00000463456 C8orf34Q49A92 452 aa6.32□□□□□ -1.4
LRPPRC-206ENST00000463456 CCDC7Q96M83 1385 aa6.32□□□□□ -1.4
LRPPRC-206ENST00000463456 SIN3AQ96ST3 1273 aa6.31□□□□□ -1.4
LRPPRC-206ENST00000463456 TOP2BQ02880 1626 aa6.31□□□□□ -1.4
LRPPRC-206ENST00000463456 NPM1P06748 294 aaKnown RBP eCLIP6.31□□□□□ -1.4
LRPPRC-206ENST00000463456 PDE3BQ13370 1112 aa6.31□□□□□ -1.4
LRPPRC-206ENST00000463456 CHMP4AQ9BY43 222 aa6.31□□□□□ -1.4
LRPPRC-206ENST00000463456 NINLQ9Y2I6 1382 aa6.31□□□□□ -1.4
LRPPRC-206ENST00000463456 HSP90B1P14625 803 aaKnown RBP6.3□□□□□ -1.4
LRPPRC-206ENST00000463456 MCM5P33992 734 aa6.3□□□□□ -1.4
LRPPRC-206ENST00000463456 UHRF1BP1LA0JNW5 1464 aa6.3□□□□□ -1.4
LRPPRC-206ENST00000463456 YEATS2Q9ULM3 1422 aa6.3□□□□□ -1.4
LRPPRC-206ENST00000463456 ZSCAN30Q86W11 494 aa6.3□□□□□ -1.4
LRPPRC-206ENST00000463456 MYH16Q9H6N6 1097 aa6.3□□□□□ -1.4
LRPPRC-206ENST00000463456 FAM193AP78312 1265 aa6.3□□□□□ -1.4
LRPPRC-206ENST00000463456 AXDND1Q5T1B0 1012 aaPredicted RBP6.3□□□□□ -1.4
LRPPRC-206ENST00000463456 SAMD1Q6SPF0 538 aaPredicted RBP6.3□□□□□ -1.4
LRPPRC-206ENST00000463456 TRIM44Q96DX7 344 aaPredicted RBP6.3□□□□□ -1.4
LRPPRC-206ENST00000463456 DHX29Q7Z478 1369 aaKnown RBP6.3□□□□□ -1.4
LRPPRC-206ENST00000463456 SMARCA4P51532 1647 aa6.29□□□□□ -1.4
LRPPRC-206ENST00000463456 MIA2Q96PC5 1412 aa6.29□□□□□ -1.4
LRPPRC-206ENST00000463456 NCOA3Q9Y6Q9 1424 aa6.29□□□□□ -1.4
LRPPRC-206ENST00000463456 GTF2F1P35269 517 aaKnown RBP eCLIP6.29□□□□□ -1.4
LRPPRC-206ENST00000463456 CCDC173Q0VFZ6 552 aa6.29□□□□□ -1.4
LRPPRC-206ENST00000463456 SECISBP2LQ93073 1101 aaKnown RBP6.29□□□□□ -1.4
LRPPRC-206ENST00000463456 GRPEL1Q9HAV7 217 aa6.29□□□□□ -1.4
LRPPRC-206ENST00000463456 LRRC9Q6ZRR7 1453 aa6.29□□□□□ -1.4
LRPPRC-206ENST00000463456 PTMSP20962 102 aa6.29□□□□□ -1.4
LRPPRC-206ENST00000463456 HFM1A2PYH4 1435 aa6.28□□□□□ -1.4
LRPPRC-206ENST00000463456 CSPP1Q1MSJ5 1256 aa6.28□□□□□ -1.4
LRPPRC-206ENST00000463456 USP19O94966 1318 aa6.28□□□□□ -1.4
LRPPRC-206ENST00000463456 CLGNO14967 610 aa6.28□□□□□ -1.4
LRPPRC-206ENST00000463456 CCDC184Q52MB2 194 aa6.28□□□□□ -1.4
LRPPRC-206ENST00000463456 DNAJC2Q99543 621 aaKnown RBP6.28□□□□□ -1.4
LRPPRC-206ENST00000463456 TONSLQ96HA7 1378 aa6.28□□□□□ -1.4
LRPPRC-206ENST00000463456 CLASP1Q7Z460 1538 aa6.28□□□□□ -1.4
LRPPRC-206ENST00000463456 CENPQQ7L2Z9 268 aaPredicted RBP6.28□□□□□ -1.4
LRPPRC-206ENST00000463456 GEMIN8Q9NWZ8 242 aaKnown RBP6.28□□□□□ -1.4
LRPPRC-206ENST00000463456 IRX3P78415 501 aaPredicted RBP6.27□□□□□ -1.41
LRPPRC-206ENST00000463456 THOC2Q8NI27 1593 aaKnown RBP6.27□□□□□ -1.41
LRPPRC-206ENST00000463456 PSEN1P49768 467 aa6.27□□□□□ -1.41
LRPPRC-206ENST00000463456 BECN1Q14457 450 aa6.27□□□□□ -1.41
LRPPRC-206ENST00000463456 TSPYL1Q9H0U9 437 aa6.27□□□□□ -1.41
LRPPRC-206ENST00000463456 FBXO3Q9UK99 471 aa6.27□□□□□ -1.41
LRPPRC-206ENST00000463456 PANK2Q9BZ23 570 aa6.26□□□□□ -1.41
LRPPRC-206ENST00000463456 RAD50Q92878 1312 aa6.26□□□□□ -1.41
LRPPRC-206ENST00000463456 TULP2O00295 520 aa6.26□□□□□ -1.41
LRPPRC-206ENST00000463456 HSP90AB1P08238 724 aaKnown RBP6.26□□□□□ -1.41
LRPPRC-206ENST00000463456 MCM4P33991 863 aa6.26□□□□□ -1.41
LRPPRC-206ENST00000463456 KANK4Q5T7N3 995 aaPredicted RBP6.26□□□□□ -1.41
LRPPRC-206ENST00000463456 ZNF622Q969S3 477 aaKnown RBP eCLIP6.26□□□□□ -1.41
LRPPRC-206ENST00000463456 MRS2Q9HD23 443 aa6.26□□□□□ -1.41
LRPPRC-206ENST00000463456 ZHX1Q9UKY1 873 aaPredicted RBP6.26□□□□□ -1.41
LRPPRC-206ENST00000463456 RBM25P49756 843 aaKnown RBP6.26□□□□□ -1.41
LRPPRC-206ENST00000463456 PKD2Q13563 968 aa6.26□□□□□ -1.41
LRPPRC-206ENST00000463456 CFAP44Q96MT7 982 aa6.26□□□□□ -1.41
LRPPRC-206ENST00000463456 ARHGAP35Q9NRY4 1499 aa6.26□□□□□ -1.41
LRPPRC-206ENST00000463456 NOL7Q9UMY1 257 aaKnown RBP6.25□□□□□ -1.41
LRPPRC-206ENST00000463456 DDX11L8A8MPP1 907 aa6.25□□□□□ -1.41
LRPPRC-206ENST00000463456 SASS6Q6UVJ0 657 aa6.25□□□□□ -1.41
LRPPRC-206ENST00000463456 EXOC6Q8TAG9 804 aa6.25□□□□□ -1.41
LRPPRC-206ENST00000463456 BRD4O60885 1362 aaPredicted RBP6.25□□□□□ -1.41
LRPPRC-206ENST00000463456 GRIPAP1Q4V328 841 aa6.25□□□□□ -1.41
LRPPRC-206ENST00000463456 CREBRFQ8IUR6 639 aa6.25□□□□□ -1.41
LRPPRC-206ENST00000463456 CEP120Q8N960 986 aa6.25□□□□□ -1.41
LRPPRC-206ENST00000463456 BLMP54132 1417 aaPredicted RBP6.24□□□□□ -1.41
LRPPRC-206ENST00000463456 BCORL1Q5H9F3 1711 aa6.24□□□□□ -1.41
LRPPRC-206ENST00000463456 PDLIM2Q96JY6 352 aa6.24□□□□□ -1.41
LRPPRC-206ENST00000463456 CUX1P39880 1505 aa6.24□□□□□ -1.41
LRPPRC-206ENST00000463456 KIF14Q15058 1648 aa6.24□□□□□ -1.41
LRPPRC-206ENST00000463456 DDIT3P35638 169 aa6.24□□□□□ -1.41
LRPPRC-206ENST00000463456 PNISRQ8TF01 805 aaKnown RBP6.24□□□□□ -1.41
LRPPRC-206ENST00000463456 PLXNC1O60486 1568 aa6.23□□□□□ -1.41
LRPPRC-206ENST00000463456 KDM5CP41229 1560 aa6.23□□□□□ -1.41
LRPPRC-206ENST00000463456 GABPB1Q06547 395 aaPredicted RBP6.23□□□□□ -1.41
LRPPRC-206ENST00000463456 SKOR2Q2VWA4 1001 aaPredicted RBP6.23□□□□□ -1.41
LRPPRC-206ENST00000463456 AQRO60306 1485 aaKnown RBP eCLIP6.23□□□□□ -1.413e-8■■■■□ 21.1
LRPPRC-206ENST00000463456 CLEC17AQ6ZS10 378 aa6.23□□□□□ -1.41
LRPPRC-206ENST00000463456 RCAN3Q9UKA8 241 aa6.23□□□□□ -1.41
LRPPRC-206ENST00000463456 EIF3AQ14152 1382 aaKnown RBP6.23□□□□□ -1.41
LRPPRC-206ENST00000463456 GAPVD1Q14C86 1478 aa6.23□□□□□ -1.41
LRPPRC-206ENST00000463456 DENND4BO75064 1496 aaPredicted RBP6.23□□□□□ -1.41
LRPPRC-206ENST00000463456 POLA1P09884 1462 aaPredicted RBP6.23□□□□□ -1.41
LRPPRC-206ENST00000463456 UQCRHLA0A096LP55 91 aa6.22□□□□□ -1.41
LRPPRC-206ENST00000463456 UQCRHP07919 91 aa6.22□□□□□ -1.41
LRPPRC-206ENST00000463456 EFCC1Q9HA90 598 aa6.22□□□□□ -1.41
LRPPRC-206ENST00000463456 TRAK2O60296 914 aa6.22□□□□□ -1.41
LRPPRC-206ENST00000463456 HSPA5P11021 654 aaKnown RBP6.22□□□□□ -1.41
LRPPRC-206ENST00000463456 MYRIPQ8NFW9 859 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms