RNA–Protein interactions for RNA: ENST00000461623.1

ABCA9-204, Transcript of ATP binding cassette subfamily A member 9, humanhuman

TSL 5

Gene ABCA9, Length 2,172 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA9-204ENST00000461623 SPDYE5A6NIY4 337 aa11.09□□□□□ -0.63
ABCA9-204ENST00000461623 SKIV2LQ15477 1246 aaKnown RBP11.09□□□□□ -0.63
ABCA9-204ENST00000461623 USP35Q9P2H5 1018 aa11.09□□□□□ -0.63
ABCA9-204ENST00000461623 PROCA1Q8NCQ7 364 aaPredicted RBP11.09□□□□□ -0.63
ABCA9-204ENST00000461623 GRXCR2A6NFK2 248 aa11.08□□□□□ -0.64
ABCA9-204ENST00000461623 PATL2C9JE40 543 aaKnown RBP11.08□□□□□ -0.64
ABCA9-204ENST00000461623 FAM9AQ8IZU1 332 aaPredicted RBP11.08□□□□□ -0.64
ABCA9-204ENST00000461623 GPHNQ9NQX3 736 aaPredicted RBP11.08□□□□□ -0.64
ABCA9-204ENST00000461623 AMOTL2Q9Y2J4 779 aa11.08□□□□□ -0.64
ABCA9-204ENST00000461623 ACIN1Q9UKV3 1341 aaKnown RBP11.07□□□□□ -0.64
ABCA9-204ENST00000461623 KCNA1Q09470 495 aa11.06□□□□□ -0.64
ABCA9-204ENST00000461623 PDE4CQ08493 712 aa11.06□□□□□ -0.64
ABCA9-204ENST00000461623 TTBK1Q5TCY1 1321 aaPredicted RBP11.05□□□□□ -0.64
ABCA9-204ENST00000461623 BRD1O95696 1058 aa11.05□□□□□ -0.64
ABCA9-204ENST00000461623 SNRKQ9NRH2 765 aa11.05□□□□□ -0.64
ABCA9-204ENST00000461623 EIF5BO60841 1220 aaKnown RBP11.04□□□□□ -0.64
ABCA9-204ENST00000461623 FCHSD2O94868 740 aa11.04□□□□□ -0.64
ABCA9-204ENST00000461623 BAZ1BQ9UIG0 1483 aaKnown RBP11.04□□□□□ -0.64
ABCA9-204ENST00000461623 OSBPP22059 807 aa11.03□□□□□ -0.64
ABCA9-204ENST00000461623 AKT1S1Q96B36 256 aa11.03□□□□□ -0.64
ABCA9-204ENST00000461623 TMUB1Q9BVT8 246 aa11.02□□□□□ -0.65
ABCA9-204ENST00000461623 WRNQ14191 1432 aaPredicted RBP eCLIP11.02□□□□□ -0.65
ABCA9-204ENST00000461623 DSG2Q14126 1118 aa11.01□□□□□ -0.65
ABCA9-204ENST00000461623 CCDC27Q2M243 656 aa11.01□□□□□ -0.65
ABCA9-204ENST00000461623 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.01□□□□□ -0.65
ABCA9-204ENST00000461623 CALR3Q96L12 384 aaKnown RBP11□□□□□ -0.65
ABCA9-204ENST00000461623 POLR3EQ9NVU0 708 aa11□□□□□ -0.65
ABCA9-204ENST00000461623 HMGXB3Q12766 1538 aa11□□□□□ -0.65
ABCA9-204ENST00000461623 ATP1B4Q9UN42 357 aaPredicted RBP11□□□□□ -0.65
ABCA9-204ENST00000461623 SOGA1O94964 1423 aa10.99□□□□□ -0.65
ABCA9-204ENST00000461623 SYNJ1O43426 1573 aa10.99□□□□□ -0.65
ABCA9-204ENST00000461623 TNIKQ9UKE5 1360 aa10.98□□□□□ -0.65
ABCA9-204ENST00000461623 REM2Q8IYK8 340 aaPredicted RBP10.98□□□□□ -0.65
ABCA9-204ENST00000461623 MAP3K13O43283 966 aa10.97□□□□□ -0.65
ABCA9-204ENST00000461623 GLMNQ92990 594 aa10.97□□□□□ -0.65
ABCA9-204ENST00000461623 GDPD2Q9HCC8 539 aa10.97□□□□□ -0.65
ABCA9-204ENST00000461623 KIF21BO75037 1637 aa10.97□□□□□ -0.65
ABCA9-204ENST00000461623 POM121CA8CG34 1229 aa10.96□□□□□ -0.66
ABCA9-204ENST00000461623 RSPH4AQ5TD94 716 aa10.96□□□□□ -0.66
ABCA9-204ENST00000461623 USTQ9Y2C2 406 aa10.96□□□□□ -0.66
ABCA9-204ENST00000461623 CARNS1A5YM72 827 aa10.95□□□□□ -0.66
ABCA9-204ENST00000461623 UNCXA6NJT0 531 aa10.95□□□□□ -0.66
ABCA9-204ENST00000461623 PTGDRQ13258 359 aa10.95□□□□□ -0.66
ABCA9-204ENST00000461623 BANK1Q8NDB2 785 aa10.95□□□□□ -0.66
ABCA9-204ENST00000461623 PBXIP1Q96AQ6 731 aa10.95□□□□□ -0.66
ABCA9-204ENST00000461623 IVNS1ABPQ9Y6Y0 642 aa10.95□□□□□ -0.66
ABCA9-204ENST00000461623 NCAPD3P42695 1498 aa10.95□□□□□ -0.66
ABCA9-204ENST00000461623 CEP162Q5TB80 1403 aa10.95□□□□□ -0.66
ABCA9-204ENST00000461623 CLCN1P35523 988 aa10.94□□□□□ -0.66
ABCA9-204ENST00000461623 ZEB1P37275 1124 aaPredicted RBP10.94□□□□□ -0.66
ABCA9-204ENST00000461623 BEGAINQ9BUH8 593 aa10.94□□□□□ -0.66
ABCA9-204ENST00000461623 GOLGA3Q08378 1498 aa10.94□□□□□ -0.66
ABCA9-204ENST00000461623 SSTR3P32745 418 aaPredicted RBP10.94□□□□□ -0.66
ABCA9-204ENST00000461623 FBXO31Q5XUX0 539 aaPredicted RBP10.94□□□□□ -0.66
ABCA9-204ENST00000461623 SND1Q7KZF4 910 aaKnown RBP eCLIP10.94□□□□□ -0.66
ABCA9-204ENST00000461623 BIVM-ERCC5R4GMW8 1640 aa10.93□□□□□ -0.66
ABCA9-204ENST00000461623 RFC5P40937 340 aa10.93□□□□□ -0.66
ABCA9-204ENST00000461623 GPCPD1Q9NPB8 672 aa10.93□□□□□ -0.66
ABCA9-204ENST00000461623 TOP2BQ02880 1626 aa10.93□□□□□ -0.66
ABCA9-204ENST00000461623 MDM2Q00987 491 aaPredicted RBP10.93□□□□□ -0.66
ABCA9-204ENST00000461623 CHADLQ6NUI6 762 aa10.93□□□□□ -0.66
ABCA9-204ENST00000461623 RUSC2Q8N2Y8 1516 aa10.92□□□□□ -0.66
ABCA9-204ENST00000461623 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.92□□□□□ -0.66
ABCA9-204ENST00000461623 TBC1D12O60347 775 aa10.92□□□□□ -0.66
ABCA9-204ENST00000461623 PRIM1P49642 420 aaKnown RBP10.92□□□□□ -0.66
ABCA9-204ENST00000461623 IGSF5Q9NSI5 407 aa10.92□□□□□ -0.66
ABCA9-204ENST00000461623 MYSM1Q5VVJ2 828 aa10.91□□□□□ -0.66
ABCA9-204ENST00000461623 PPARGC1BQ86YN6 1023 aaKnown RBP10.91□□□□□ -0.66
ABCA9-204ENST00000461623 MTMR14Q8NCE2 650 aa10.91□□□□□ -0.66
ABCA9-204ENST00000461623 PHOX2BQ99453 314 aa10.91□□□□□ -0.66
ABCA9-204ENST00000461623 CEP164Q9UPV0 1460 aa10.9□□□□□ -0.66
ABCA9-204ENST00000461623 FAM177A1Q8N128 213 aaPredicted RBP10.9□□□□□ -0.66
ABCA9-204ENST00000461623 MYT1LQ9UL68 1186 aa10.9□□□□□ -0.66
ABCA9-204ENST00000461623 KIF12Q96FN5 646 aa10.9□□□□□ -0.66
ABCA9-204ENST00000461623 FARP1Q9Y4F1 1045 aaPredicted RBP10.9□□□□□ -0.66
ABCA9-204ENST00000461623 CHMP4AQ9BY43 222 aa10.89□□□□□ -0.67
ABCA9-204ENST00000461623 CSB-PGBD3P0DP91 1061 aa10.88□□□□□ -0.67
ABCA9-204ENST00000461623 FOXK1P85037 733 aa10.88□□□□□ -0.67
ABCA9-204ENST00000461623 SRPK2P78362 688 aaKnown RBP10.87□□□□□ -0.67
ABCA9-204ENST00000461623 DDX12PQ92771 950 aa10.87□□□□□ -0.67
ABCA9-204ENST00000461623 RFX1P22670 979 aa10.87□□□□□ -0.67
ABCA9-204ENST00000461623 CLK2P49760 499 aaKnown RBP10.87□□□□□ -0.67
ABCA9-204ENST00000461623 PITPNM1O00562 1244 aa10.86□□□□□ -0.67
ABCA9-204ENST00000461623 ABL2P42684 1182 aa10.86□□□□□ -0.67
ABCA9-204ENST00000461623 PRDM2Q13029 1718 aa10.86□□□□□ -0.67
ABCA9-204ENST00000461623 WWC1Q8IX03 1113 aa10.86□□□□□ -0.67
ABCA9-204ENST00000461623 MAP3K9P80192 1104 aa10.85□□□□□ -0.67
ABCA9-204ENST00000461623 CFAP70Q5T0N1 1121 aa10.84□□□□□ -0.67
ABCA9-204ENST00000461623 PTGER2P43116 358 aa10.84□□□□□ -0.67
ABCA9-204ENST00000461623 FAM217BQ9NTX9 383 aaPredicted RBP10.84□□□□□ -0.67
ABCA9-204ENST00000461623 TMEM259Q4ZIN3 620 aa10.83□□□□□ -0.68
ABCA9-204ENST00000461623 GOLGA2Q08379 1002 aa10.83□□□□□ -0.68
ABCA9-204ENST00000461623 TBC1D2BQ9UPU7 963 aa10.83□□□□□ -0.68
ABCA9-204ENST00000461623 ADAMTS19Q8TE59 1207 aa10.82□□□□□ -0.68
ABCA9-204ENST00000461623 CFTRP13569 1480 aa10.82□□□□□ -0.68
ABCA9-204ENST00000461623 PLPP6Q8IY26 295 aa10.82□□□□□ -0.68
ABCA9-204ENST00000461623 RBM42Q9BTD8 480 aaKnown RBP10.82□□□□□ -0.68
ABCA9-204ENST00000461623 ERICH3Q5RHP9 1530 aa10.81□□□□□ -0.68
ABCA9-204ENST00000461623 RBM47A0AV96 593 aaKnown RBP10.81□□□□□ -0.68
ABCA9-204ENST00000461623 PPP2R2DQ66LE6 453 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms