RNA–Protein interactions for RNA: ENST00000460620.5

PTPN22-203, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 1,794 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-203ENST00000460620 TRIM67Q6ZTA4 783 aa7.01□□□□□ -1.29
PTPN22-203ENST00000460620 ZBED2Q9BTP6 218 aa7.01□□□□□ -1.29
PTPN22-203ENST00000460620 IGHA1P01876 353 aa7□□□□□ -1.29
PTPN22-203ENST00000460620 EFCAB3Q8N7B9 438 aa7□□□□□ -1.29
PTPN22-203ENST00000460620 ST8SIA5O15466 376 aa6.99□□□□□ -1.29
PTPN22-203ENST00000460620 WBP1LQ9NX94 342 aa6.98□□□□□ -1.29
PTPN22-203ENST00000460620 BCL2L12Q9HB09 334 aa6.97□□□□□ -1.29
PTPN22-203ENST00000460620 SOX12O15370 315 aa6.96□□□□□ -1.3
PTPN22-203ENST00000460620 C2orf72A6NCS6 295 aa6.95□□□□□ -1.3
PTPN22-203ENST00000460620 CRIPAKQ8N1N5 446 aa6.95□□□□□ -1.3
PTPN22-203ENST00000460620 CIZ1Q9ULV3 898 aaPredicted RBP6.95□□□□□ -1.3
PTPN22-203ENST00000460620 SLC16A10Q8TF71 515 aa6.94□□□□□ -1.3
PTPN22-203ENST00000460620 GMPR2Q9P2T1 348 aaKnown RBP6.94□□□□□ -1.3
PTPN22-203ENST00000460620 GDF11O95390 407 aa6.93□□□□□ -1.3
PTPN22-203ENST00000460620 PTPREP23469 700 aa6.93□□□□□ -1.3
PTPN22-203ENST00000460620 GGCXP38435 758 aa6.93□□□□□ -1.3
PTPN22-203ENST00000460620 LAPTM4BQ86VI4 370 aa6.93□□□□□ -1.3
PTPN22-203ENST00000460620 TRIM41Q8WV44 630 aa6.93□□□□□ -1.3
PTPN22-203ENST00000460620 GSK3AP49840 483 aa6.92□□□□□ -1.3
PTPN22-203ENST00000460620 PTCD2Q8WV60 388 aaKnown RBP6.9□□□□□ -1.3
PTPN22-203ENST00000460620 MS4A4AQ96JQ5 239 aa6.9□□□□□ -1.31
PTPN22-203ENST00000460620 TSR3Q9UJK0 312 aaKnown RBP6.89□□□□□ -1.31
PTPN22-203ENST00000460620 TJAP1Q5JTD0 557 aa6.87□□□□□ -1.31
PTPN22-203ENST00000460620 RASSF7Q02833 373 aa6.87□□□□□ -1.31
PTPN22-203ENST00000460620 IL21Q9HBE4 155 aa6.87□□□□□ -1.31
PTPN22-203ENST00000460620 GMPRP36959 345 aa6.86□□□□□ -1.31
PTPN22-203ENST00000460620 RABGEF1Q9UJ41 708 aa6.86□□□□□ -1.31
PTPN22-203ENST00000460620 RNF225M0QZC1 329 aaPredicted RBP6.85□□□□□ -1.31
PTPN22-203ENST00000460620 TMUB1Q9BVT8 246 aa6.85□□□□□ -1.31
PTPN22-203ENST00000460620 TBC1D12O60347 775 aa6.84□□□□□ -1.31
PTPN22-203ENST00000460620 ZNF598Q86UK7 904 aaKnown RBP6.82□□□□□ -1.32
PTPN22-203ENST00000460620 FOXK2Q01167 660 aa6.82□□□□□ -1.32
PTPN22-203ENST00000460620 ADAM23O75077 832 aa6.81□□□□□ -1.32
PTPN22-203ENST00000460620 SLC19A1P41440 591 aa6.81□□□□□ -1.32
PTPN22-203ENST00000460620 IRF7Q92985 503 aa6.81□□□□□ -1.32
PTPN22-203ENST00000460620 ZFRQ96KR1 1074 aaKnown RBP6.81□□□□□ -1.32
PTPN22-203ENST00000460620 CTC1Q2NKJ3 1217 aa6.8□□□□□ -1.32
PTPN22-203ENST00000460620 GPAT2Q6NUI2 795 aa6.8□□□□□ -1.32
PTPN22-203ENST00000460620 TMC2Q8TDI7 906 aa6.8□□□□□ -1.32
PTPN22-203ENST00000460620 KRTAP17-1Q9BYP8 105 aa6.8□□□□□ -1.32
PTPN22-203ENST00000460620 DACH1Q9UI36 760 aa6.8□□□□□ -1.32
PTPN22-203ENST00000460620 HPS5Q9UPZ3 1129 aa6.8□□□□□ -1.32
PTPN22-203ENST00000460620 LCE1DQ5T752 114 aa6.8□□□□□ -1.32
PTPN22-203ENST00000460620 RIOK3O14730 519 aaKnown RBP6.79□□□□□ -1.32
PTPN22-203ENST00000460620 AXIN1O15169 862 aa6.79□□□□□ -1.32
PTPN22-203ENST00000460620 Q8N3U1 123 aa6.78□□□□□ -1.32
PTPN22-203ENST00000460620 ZNF454Q8N9F8 522 aa6.78□□□□□ -1.32
PTPN22-203ENST00000460620 DNMT3AQ9Y6K1 912 aaPredicted RBP6.77□□□□□ -1.33
PTPN22-203ENST00000460620 VGFO15240 615 aaPredicted RBP6.77□□□□□ -1.33
PTPN22-203ENST00000460620 SPRYD7Q5W111 196 aa6.77□□□□□ -1.33
PTPN22-203ENST00000460620 TAOK2Q9UL54 1235 aa6.77□□□□□ -1.33
PTPN22-203ENST00000460620 AVPP01185 164 aa6.76□□□□□ -1.33
PTPN22-203ENST00000460620 RNF25Q96BH1 459 aaPredicted RBP6.76□□□□□ -1.33
PTPN22-203ENST00000460620 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.76□□□□□ -1.33
PTPN22-203ENST00000460620 SENP2Q9HC62 589 aa6.75□□□□□ -1.33
PTPN22-203ENST00000460620 GDF9O60383 454 aa6.74□□□□□ -1.33
PTPN22-203ENST00000460620 SMCPP49901 116 aaPredicted RBP6.74□□□□□ -1.33
PTPN22-203ENST00000460620 NPAS3Q8IXF0 933 aa6.74□□□□□ -1.33
PTPN22-203ENST00000460620 MTRQ99707 1265 aa6.74□□□□□ -1.33
PTPN22-203ENST00000460620 PHF8Q9UPP1 1060 aa6.74□□□□□ -1.33
PTPN22-203ENST00000460620 LRCH3Q96II8 777 aa6.74□□□□□ -1.33
PTPN22-203ENST00000460620 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.72□□□□□ -1.33
PTPN22-203ENST00000460620 ZFP91Q96JP5 570 aaPredicted RBP6.72□□□□□ -1.33
PTPN22-203ENST00000460620 ECM2O94769 699 aaPredicted RBP6.72□□□□□ -1.33
PTPN22-203ENST00000460620 ZNF697Q5TEC3 545 aa6.71□□□□□ -1.34
PTPN22-203ENST00000460620 LMOD2Q6P5Q4 547 aa6.7□□□□□ -1.34
PTPN22-203ENST00000460620 TRIM47Q96LD4 638 aa6.7□□□□□ -1.34
PTPN22-203ENST00000460620 KRTAP4-9Q9BYQ8 210 aa6.7□□□□□ -1.34
PTPN22-203ENST00000460620 KRTAP4-2Q9BYR5 136 aa6.7□□□□□ -1.34
PTPN22-203ENST00000460620 TNFRSF10AO00220 468 aa6.69□□□□□ -1.34
PTPN22-203ENST00000460620 SNRPBP14678 240 aaKnown RBP6.69□□□□□ -1.34
PTPN22-203ENST00000460620 PKD2Q13563 968 aa6.69□□□□□ -1.34
PTPN22-203ENST00000460620 KIFC2Q96AC6 838 aa6.69□□□□□ -1.34
PTPN22-203ENST00000460620 NLRP6P59044 892 aa6.68□□□□□ -1.34
PTPN22-203ENST00000460620 NXF1Q9UBU9 619 aaKnown RBP6.67□□□□□ -1.34
PTPN22-203ENST00000460620 PPP1R3GB7ZBB8 358 aa6.67□□□□□ -1.34
PTPN22-203ENST00000460620 FOSBP53539 338 aa6.67□□□□□ -1.34
PTPN22-203ENST00000460620 PPP4CP60510 307 aa6.67□□□□□ -1.34
PTPN22-203ENST00000460620 BCL11BQ9C0K0 894 aaPredicted RBP6.66□□□□□ -1.34
PTPN22-203ENST00000460620 STK24Q9Y6E0 443 aa6.64□□□□□ -1.35
PTPN22-203ENST00000460620 RGL2O15211 777 aa6.64□□□□□ -1.35
PTPN22-203ENST00000460620 ONECUT3O60422 494 aaPredicted RBP6.64□□□□□ -1.35
PTPN22-203ENST00000460620 STK25O00506 426 aa6.63□□□□□ -1.35
PTPN22-203ENST00000460620 KRTAP19-1Q8IUB9 90 aa6.63□□□□□ -1.35
PTPN22-203ENST00000460620 FAM98CQ17RN3 349 aaKnown RBP6.62□□□□□ -1.35
PTPN22-203ENST00000460620 ZNF516Q92618 1163 aa6.62□□□□□ -1.35
PTPN22-203ENST00000460620 GOLGA2P5Q9HBQ8 144 aa6.62□□□□□ -1.35
PTPN22-203ENST00000460620 EMID1Q96A84 441 aaPredicted RBP6.61□□□□□ -1.35
PTPN22-203ENST00000460620 ATP13A2Q9NQ11 1180 aa6.61□□□□□ -1.35
PTPN22-203ENST00000460620 FBXO22Q8NEZ5 403 aa6.59□□□□□ -1.35
PTPN22-203ENST00000460620 PROX2Q3B8N5 592 aa6.59□□□□□ -1.35
PTPN22-203ENST00000460620 ZDHHC16Q969W1 377 aa6.59□□□□□ -1.35
PTPN22-203ENST00000460620 H3BM21 787 aa6.58□□□□□ -1.36
PTPN22-203ENST00000460620 NKX2-3Q8TAU0 364 aa6.58□□□□□ -1.36
PTPN22-203ENST00000460620 JPH4Q96JJ6 628 aa6.57□□□□□ -1.36
PTPN22-203ENST00000460620 MFRPQ9BY79 579 aa6.57□□□□□ -1.36
PTPN22-203ENST00000460620 KIAA1468Q9P260 1216 aa6.57□□□□□ -1.36
PTPN22-203ENST00000460620 KRTAP5-3Q6L8H2 238 aa6.55□□□□□ -1.36
PTPN22-203ENST00000460620 ADAM33Q9BZ11 813 aa6.55□□□□□ -1.36
PTPN22-203ENST00000460620 KANK3Q6NY19 840 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms