RNA–Protein interactions for RNA: ENST00000456331.6

PPP1R9A-208, Transcript of protein phosphatase 1 regulatory subunit 9A, human

TSL 1 (best) BASIC

Gene PPP1R9A, Length 10,090 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP1R9A-208	ENST00000456331	AMOTL1	Q8IY63	956 aa		4.94	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	DIAPH3	Q9NSV4	1193 aa		4.94	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	NUCB2	P80303	420 aa		4.94	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	NAP1L2	Q9ULW6	460 aa	Predicted RBP	4.94	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	NAT10	Q9H0A0	1025 aa	Known RBP	4.94	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	FANCI	Q9NVI1	1328 aa		4.94	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	NINL	Q9Y2I6	1382 aa		4.94	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	RNF20	Q5VTR2	975 aa		4.94	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	MCM2	P49736	904 aa		4.94	□□□□□ -1.62
PPP1R9A-208	ENST00000456331		E9PSI1	815 aa		4.94	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	HSP90B1	P14625	803 aa	Known RBP	4.94	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	HSP90AB4P	Q58FF6	505 aa		4.94	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	FAM161A	Q3B820	660 aa		4.93	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	CENPJ	Q9HC77	1338 aa	Predicted RBP	4.93	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	CCDC66	A2RUB6	948 aa		4.93	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	DCAF11	Q8TEB1	546 aa		4.93	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	MYBBP1A	Q9BQG0	1328 aa	Known RBP	4.93	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	PIP4K2A	P48426	406 aa	Predicted RBP	4.93	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	SRPK2	P78362	688 aa	Known RBP	4.93	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	TAF3	Q5VWG9	929 aa		4.93	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	WASHC2A	Q641Q2	1341 aa		4.93	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	ZBED9	Q6R2W3	1325 aa		4.93	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	RGL3	Q3MIN7	710 aa		4.93	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	EFCAB2	Q5VUJ9	269 aa		4.93	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	SYNE3	Q6ZMZ3	975 aa		4.93	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	HMGN5	P82970	282 aa	Known RBP	4.92	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	GORAB	Q5T7V8	394 aa		4.92	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	MIA2	Q96PC5	1412 aa		4.92	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	ZKSCAN1	P17029	563 aa	Predicted RBP	4.92	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	CCDC173	Q0VFZ6	552 aa		4.92	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	GSE1	Q14687	1217 aa		4.92	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	SF3A1	Q15459	793 aa	Known RBP	4.92	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	RRP12	Q5JTH9	1297 aa	Known RBP	4.92	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	BECN2	A8MW95	431 aa		4.92	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	PKNOX2	Q96KN3	472 aa		4.92	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	MFAP1	P55081	439 aa	Known RBP	4.92	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	TOP2A	P11388	1531 aa	Known RBP	4.92	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	TPD52L1	Q16890	204 aa	Predicted RBP	4.92	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	WASHC2C	Q9Y4E1	1318 aa		4.92	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	AKAP17A	Q02040	695 aa	Known RBP	4.92	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	PLPPR3	Q6T4P5	718 aa		4.92	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	CCDC7	Q96M83	1385 aa		4.92	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	DDX19B	Q9UMR2	479 aa		4.92	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	CUX2	O14529	1486 aa		4.91	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	ZRSR2	Q15696	482 aa	Known RBP	4.91	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	ITPRIP	Q8IWB1	547 aa		4.91	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	IRX6	P78412	446 aa	Predicted RBP	4.91	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	HSP90B2P	Q58FF3	399 aa		4.91	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	TRIM29	Q14134	588 aa		4.91	□□□□□ -1.62
PPP1R9A-208	ENST00000456331		H3BQV1	296 aa		4.91	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	IFFO2	Q5TF58	517 aa		4.91	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	FAM184A	Q8NB25	1140 aa		4.91	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	RASSF8	Q8NHQ8	419 aa		4.91	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	RUFY1	Q96T51	708 aa		4.91	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	LUC7L	Q9NQ29	371 aa	Known RBP	4.9	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	CNTLN	Q9NXG0	1405 aa		4.9	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	USP8	P40818	1118 aa		4.9	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	B4GALNT3	Q6L9W6	998 aa		4.9	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	CCDC191	Q8NCU4	936 aa		4.9	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	CHMP5	Q9NZZ3	219 aa		4.9	□□□□□ -1.62
PPP1R9A-208	ENST00000456331	HIP1	O00291	1037 aa		4.9	□□□□□ -1.63
PPP1R9A-208	ENST00000456331	TAF7L	Q5H9L4	462 aa		4.9	□□□□□ -1.63
PPP1R9A-208	ENST00000456331	EID1	Q9Y6B2	187 aa		4.9	□□□□□ -1.63
PPP1R9A-208	ENST00000456331	CC2D1B	Q5T0F9	858 aa	Known RBP	4.9	□□□□□ -1.63
PPP1R9A-208	ENST00000456331	CLSTN1	O94985	981 aa		4.9	□□□□□ -1.63
PPP1R9A-208	ENST00000456331	MBD3	O95983	291 aa		4.9	□□□□□ -1.63
PPP1R9A-208	ENST00000456331	HMGB1	P09429	215 aa	Known RBP	4.9	□□□□□ -1.63
PPP1R9A-208	ENST00000456331	RAPGEF2	Q9Y4G8	1499 aa		4.9	□□□□□ -1.63
PPP1R9A-208	ENST00000456331	NEXN	Q0ZGT2	675 aa		4.9	□□□□□ -1.63
PPP1R9A-208	ENST00000456331	NEUROD2	Q15784	382 aa		4.9	□□□□□ -1.63
PPP1R9A-208	ENST00000456331	KCNH8	Q96L42	1107 aa		4.9	□□□□□ -1.63
PPP1R9A-208	ENST00000456331	XBP1	P17861	261 aa		4.89	□□□□□ -1.63
PPP1R9A-208	ENST00000456331	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	4.89	□□□□□ -1.63
PPP1R9A-208	ENST00000456331	API5	Q9BZZ5	524 aa	Known RBP	4.89	□□□□□ -1.63
PPP1R9A-208	ENST00000456331	PDC	P20941	246 aa		4.89	□□□□□ -1.63
PPP1R9A-208	ENST00000456331	CCDC144A	A2RUR9	1427 aa		4.89	□□□□□ -1.63
PPP1R9A-208	ENST00000456331		A0A0G2JS52	829 aa		4.89	□□□□□ -1.63
PPP1R9A-208	ENST00000456331	CT47B1	P0C2W7	299 aa	Predicted RBP	4.89	□□□□□ -1.63
PPP1R9A-208	ENST00000456331	EIF4G1	Q04637	1599 aa	Known RBP	4.89	□□□□□ -1.63
PPP1R9A-208	ENST00000456331	NOL10	Q9BSC4	688 aa	Known RBP	4.89	□□□□□ -1.63
PPP1R9A-208	ENST00000456331	ZBTB7C	A1YPR0	619 aa		4.89	□□□□□ -1.63
PPP1R9A-208	ENST00000456331	U2AF1L5	P0DN76	240 aa	Predicted RBP	4.89	□□□□□ -1.63
PPP1R9A-208	ENST00000456331	U2AF1	Q01081	240 aa	Known RBP eCLIP	4.89	□□□□□ -1.63
PPP1R9A-208	ENST00000456331	ZKSCAN2	Q63HK3	967 aa		4.89	□□□□□ -1.63
PPP1R9A-208	ENST00000456331	ANKRD18A	Q8IVF6	992 aa		4.89	□□□□□ -1.63
PPP1R9A-208	ENST00000456331	KAT6B	Q8WYB5	2073 aa		4.89	□□□□□ -1.63
PPP1R9A-208	ENST00000456331	GOLGA6L7	A0A1B0GV03	622 aa		4.89	□□□□□ -1.63
PPP1R9A-208	ENST00000456331	RABEP1	Q15276	862 aa		4.89	□□□□□ -1.63
PPP1R9A-208	ENST00000456331	MPHOSPH9	Q99550	1183 aa		4.89	□□□□□ -1.63
PPP1R9A-208	ENST00000456331	DDX58	O95786	925 aa	Known RBP	4.89	□□□□□ -1.63
PPP1R9A-208	ENST00000456331	PDCL2	Q8N4E4	241 aa		4.89	□□□□□ -1.63
PPP1R9A-208	ENST00000456331	CCDC39	Q9UFE4	941 aa		4.89	□□□□□ -1.63
PPP1R9A-208	ENST00000456331	TRIM6-TRIM34	B2RNG4	842 aa		4.89	□□□□□ -1.63
PPP1R9A-208	ENST00000456331	HSPA5	P11021	654 aa	Known RBP	4.88	□□□□□ -1.63
PPP1R9A-208	ENST00000456331	NUP155	O75694	1391 aa		4.88	□□□□□ -1.63
PPP1R9A-208	ENST00000456331	ERC2	O15083	957 aa		4.88	□□□□□ -1.63
PPP1R9A-208	ENST00000456331	INTS3	Q68E01	1043 aa	Known RBP	4.88	□□□□□ -1.63
PPP1R9A-208	ENST00000456331	BRMS1	Q9HCU9	246 aa		4.88	□□□□□ -1.63
PPP1R9A-208	ENST00000456331	PSMA5	P28066	241 aa		4.88	□□□□□ -1.63
PPP1R9A-208	ENST00000456331	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	4.88	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms