RNA–Protein interactions for RNA: ENST00000445184.1

LINC01004-201, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 5 BASIC

Gene LINC01004, Length 686 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-201ENST00000445184 WBP1LQ9NX94 342 aa11.19□□□□□ -0.62
LINC01004-201ENST00000445184 PCDHGA10Q9Y5H3 936 aa11.19□□□□□ -0.62
LINC01004-201ENST00000445184 DNAJC5Q9H3Z4 198 aa11.18□□□□□ -0.62
LINC01004-201ENST00000445184 NKX1-1Q15270 411 aaPredicted RBP11.17□□□□□ -0.62
LINC01004-201ENST00000445184 FBXW7Q969H0 707 aa11.17□□□□□ -0.62
LINC01004-201ENST00000445184 TRAF7Q6Q0C0 670 aa11.16□□□□□ -0.62
LINC01004-201ENST00000445184 KIAA1468Q9P260 1216 aa11.16□□□□□ -0.62
LINC01004-201ENST00000445184 ONECUT3O60422 494 aaPredicted RBP11.15□□□□□ -0.62
LINC01004-201ENST00000445184 DDX27Q96GQ7 796 aaKnown RBP11.15□□□□□ -0.62
LINC01004-201ENST00000445184 GFRA3O60609 400 aa11.14□□□□□ -0.63
LINC01004-201ENST00000445184 TYW1BQ6NUM6 668 aa11.14□□□□□ -0.63
LINC01004-201ENST00000445184 LARP6Q9BRS8 491 aaKnown RBP11.14□□□□□ -0.63
LINC01004-201ENST00000445184 LCE2BO14633 110 aa11.12□□□□□ -0.63
LINC01004-201ENST00000445184 PHF14O94880 888 aa11.11□□□□□ -0.63
LINC01004-201ENST00000445184 SEPT9Q9UHD8 586 aaPredicted RBP11.1□□□□□ -0.63
LINC01004-201ENST00000445184 TSR3Q9UJK0 312 aaKnown RBP11.1□□□□□ -0.63
LINC01004-201ENST00000445184 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.09□□□□□ -0.63
LINC01004-201ENST00000445184 FAM98CQ17RN3 349 aaKnown RBP11.08□□□□□ -0.64
LINC01004-201ENST00000445184 EMILIN3Q9NT22 766 aa11.08□□□□□ -0.64
LINC01004-201ENST00000445184 HPS5Q9UPZ3 1129 aa11.08□□□□□ -0.64
LINC01004-201ENST00000445184 MFSD10Q14728 455 aa11.07□□□□□ -0.64
LINC01004-201ENST00000445184 LRCH3Q96II8 777 aa11.07□□□□□ -0.64
LINC01004-201ENST00000445184 TRIM6-TRIM34B2RNG4 842 aa11.05□□□□□ -0.64
LINC01004-201ENST00000445184 C6orf132Q5T0Z8 1188 aa11.05□□□□□ -0.64
LINC01004-201ENST00000445184 NRG2O14511 850 aaPredicted RBP11.04□□□□□ -0.64
LINC01004-201ENST00000445184 EPAS1Q99814 870 aa11.04□□□□□ -0.64
LINC01004-201ENST00000445184 PRKD2Q9BZL6 878 aa11.02□□□□□ -0.65
LINC01004-201ENST00000445184 PPP4CP60510 307 aa10.99□□□□□ -0.65
LINC01004-201ENST00000445184 V9GY48 417 aaPredicted RBP10.98□□□□□ -0.65
LINC01004-201ENST00000445184 GTPBP6O43824 516 aaPredicted RBP10.96□□□□□ -0.65
LINC01004-201ENST00000445184 TJAP1Q5JTD0 557 aa10.96□□□□□ -0.65
LINC01004-201ENST00000445184 ZNF787Q6DD87 383 aa10.96□□□□□ -0.65
LINC01004-201ENST00000445184 PACS2Q86VP3 889 aa10.95□□□□□ -0.66
LINC01004-201ENST00000445184 RBM33Q96EV2 1170 aaKnown RBP10.95□□□□□ -0.66
LINC01004-201ENST00000445184 PPP1R18Q6NYC8 613 aa10.93□□□□□ -0.66
LINC01004-201ENST00000445184 IL21Q9HBE4 155 aa10.92□□□□□ -0.66
LINC01004-201ENST00000445184 MTRQ99707 1265 aa10.9□□□□□ -0.66
LINC01004-201ENST00000445184 TSKSQ9UJT2 592 aa10.9□□□□□ -0.66
LINC01004-201ENST00000445184 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.89□□□□□ -0.67
LINC01004-201ENST00000445184 PDZRN3Q9UPQ7 1066 aa10.88□□□□□ -0.67
LINC01004-201ENST00000445184 DPYSL4O14531 572 aa10.87□□□□□ -0.67
LINC01004-201ENST00000445184 SAMD7Q7Z3H4 446 aa10.87□□□□□ -0.67
LINC01004-201ENST00000445184 ZNF775Q96BV0 537 aaPredicted RBP10.87□□□□□ -0.67
LINC01004-201ENST00000445184 CAMK2BQ13554 666 aa10.86□□□□□ -0.67
LINC01004-201ENST00000445184 DDX12PQ92771 950 aa10.86□□□□□ -0.67
LINC01004-201ENST00000445184 EN1Q05925 392 aaPredicted RBP10.83□□□□□ -0.68
LINC01004-201ENST00000445184 ZNF516Q92618 1163 aa10.83□□□□□ -0.68
LINC01004-201ENST00000445184 SMAPO00193 183 aa10.82□□□□□ -0.68
LINC01004-201ENST00000445184 MAP3K7O43318 606 aa10.82□□□□□ -0.68
LINC01004-201ENST00000445184 TSR1Q2NL82 804 aaKnown RBP10.82□□□□□ -0.68
LINC01004-201ENST00000445184 CADPS2Q86UW7 1296 aa10.82□□□□□ -0.68
LINC01004-201ENST00000445184 GGCXP38435 758 aa10.8□□□□□ -0.68
LINC01004-201ENST00000445184 NBR1Q14596 966 aa10.8□□□□□ -0.68
LINC01004-201ENST00000445184 CDCA7LQ96GN5 454 aa10.8□□□□□ -0.68
LINC01004-201ENST00000445184 HDGFP51858 240 aaKnown RBP10.78□□□□□ -0.68
LINC01004-201ENST00000445184 PRSS12P56730 875 aa10.78□□□□□ -0.68
LINC01004-201ENST00000445184 NBPF26B4DH59 902 aa10.76□□□□□ -0.69
LINC01004-201ENST00000445184 NKX2-3Q8TAU0 364 aa10.76□□□□□ -0.69
LINC01004-201ENST00000445184 CERKQ8TCT0 537 aa10.76□□□□□ -0.69
LINC01004-201ENST00000445184 TATDN2Q93075 761 aa10.76□□□□□ -0.69
LINC01004-201ENST00000445184 RNF40O75150 1001 aa10.75□□□□□ -0.69
LINC01004-201ENST00000445184 APLP1P51693 650 aa10.75□□□□□ -0.69
LINC01004-201ENST00000445184 FAM198AQ9UFP1 575 aa10.75□□□□□ -0.69
LINC01004-201ENST00000445184 PNMA3Q9UL41 463 aa10.75□□□□□ -0.69
LINC01004-201ENST00000445184 TMUB1Q9BVT8 246 aa10.74□□□□□ -0.69
LINC01004-201ENST00000445184 NECTIN2Q92692 538 aa10.73□□□□□ -0.69
LINC01004-201ENST00000445184 C3orf80F5H4A9 247 aa10.71□□□□□ -0.69
LINC01004-201ENST00000445184 PDIA6Q15084 440 aa10.7□□□□□ -0.7
LINC01004-201ENST00000445184 COPS2P61201 443 aa10.69□□□□□ -0.7
LINC01004-201ENST00000445184 SPDYE16A6NNV3 312 aaPredicted RBP10.68□□□□□ -0.7
LINC01004-201ENST00000445184 PKDCCQ504Y2 493 aa10.68□□□□□ -0.7
LINC01004-201ENST00000445184 NUDT18Q6ZVK8 323 aa10.67□□□□□ -0.7
LINC01004-201ENST00000445184 DGAT1O75907 488 aa10.66□□□□□ -0.7
LINC01004-201ENST00000445184 MYT1Q01538 1121 aa10.66□□□□□ -0.7
LINC01004-201ENST00000445184 TRIM67Q6ZTA4 783 aa10.66□□□□□ -0.7
LINC01004-201ENST00000445184 ZPR1O75312 459 aa10.65□□□□□ -0.7
LINC01004-201ENST00000445184 SLC19A1P41440 591 aa10.65□□□□□ -0.7
LINC01004-201ENST00000445184 SLF2Q8IX21 1173 aa10.64□□□□□ -0.71
LINC01004-201ENST00000445184 RBM27Q9P2N5 1060 aaKnown RBP10.63□□□□□ -0.71
LINC01004-201ENST00000445184 POTECB2RU33 542 aa10.61□□□□□ -0.71
LINC01004-201ENST00000445184 PRIM1P49642 420 aaKnown RBP10.61□□□□□ -0.71
LINC01004-201ENST00000445184 PRR20EP86478 221 aa10.61□□□□□ -0.71
LINC01004-201ENST00000445184 PRR20CP86479 221 aa10.61□□□□□ -0.71
LINC01004-201ENST00000445184 PRR20DP86480 221 aa10.61□□□□□ -0.71
LINC01004-201ENST00000445184 PRR20BP86481 221 aa10.61□□□□□ -0.71
LINC01004-201ENST00000445184 PRR20AP86496 221 aa10.61□□□□□ -0.71
LINC01004-201ENST00000445184 SWT1Q5T5J6 900 aaKnown RBP10.61□□□□□ -0.71
LINC01004-201ENST00000445184 GRXCR2A6NFK2 248 aa10.6□□□□□ -0.71
LINC01004-201ENST00000445184 RNF223E7ERA6 249 aa10.6□□□□□ -0.71
LINC01004-201ENST00000445184 DCAF8L2P0C7V8 631 aa10.6□□□□□ -0.71
LINC01004-201ENST00000445184 SLC4A3P48751 1232 aa10.6□□□□□ -0.71
LINC01004-201ENST00000445184 SPRYD7Q5W111 196 aa10.6□□□□□ -0.71
LINC01004-201ENST00000445184 ZNF598Q86UK7 904 aaKnown RBP10.6□□□□□ -0.71
LINC01004-201ENST00000445184 PRR14Q9BWN1 585 aa10.59□□□□□ -0.71
LINC01004-201ENST00000445184 EMID1Q96A84 441 aaPredicted RBP10.58□□□□□ -0.72
LINC01004-201ENST00000445184 TREML4Q6UXN2 200 aa10.57□□□□□ -0.72
LINC01004-201ENST00000445184 CDHR5Q9HBB8 845 aa10.57□□□□□ -0.72
LINC01004-201ENST00000445184 PCDHB3Q9Y5E6 796 aa10.57□□□□□ -0.72
LINC01004-201ENST00000445184 FAM187AA6NFU0 413 aa10.56□□□□□ -0.72
LINC01004-201ENST00000445184 ANKLE1Q8NAG6 615 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms