RNA–Protein interactions for RNA: ENST00000445184.1

LINC01004-201, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 5 BASIC

Gene LINC01004, Length 686 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-201ENST00000445184 WBP1LQ9NX94 342 aa11.19□□□□□ -0.62
LINC01004-201ENST00000445184 PCDHGA10Q9Y5H3 936 aa11.19□□□□□ -0.62
LINC01004-201ENST00000445184 DNAJC5Q9H3Z4 198 aa11.18□□□□□ -0.62
LINC01004-201ENST00000445184 NKX1-1Q15270 411 aaPredicted RBP11.17□□□□□ -0.62
LINC01004-201ENST00000445184 FBXW7Q969H0 707 aa11.17□□□□□ -0.62
LINC01004-201ENST00000445184 TRAF7Q6Q0C0 670 aa11.16□□□□□ -0.62
LINC01004-201ENST00000445184 KIAA1468Q9P260 1216 aa11.16□□□□□ -0.62
LINC01004-201ENST00000445184 ONECUT3O60422 494 aaPredicted RBP11.15□□□□□ -0.62
LINC01004-201ENST00000445184 DDX27Q96GQ7 796 aaKnown RBP11.15□□□□□ -0.62
LINC01004-201ENST00000445184 GFRA3O60609 400 aa11.14□□□□□ -0.63
LINC01004-201ENST00000445184 TYW1BQ6NUM6 668 aa11.14□□□□□ -0.63
LINC01004-201ENST00000445184 LARP6Q9BRS8 491 aaKnown RBP11.14□□□□□ -0.63
LINC01004-201ENST00000445184 LCE2BO14633 110 aa11.12□□□□□ -0.63
LINC01004-201ENST00000445184 PHF14O94880 888 aa11.11□□□□□ -0.63
LINC01004-201ENST00000445184 SEPT9Q9UHD8 586 aaPredicted RBP11.1□□□□□ -0.63
LINC01004-201ENST00000445184 TSR3Q9UJK0 312 aaKnown RBP11.1□□□□□ -0.63
LINC01004-201ENST00000445184 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.09□□□□□ -0.63
LINC01004-201ENST00000445184 FAM98CQ17RN3 349 aaKnown RBP11.08□□□□□ -0.64
LINC01004-201ENST00000445184 EMILIN3Q9NT22 766 aa11.08□□□□□ -0.64
LINC01004-201ENST00000445184 HPS5Q9UPZ3 1129 aa11.08□□□□□ -0.64
LINC01004-201ENST00000445184 MFSD10Q14728 455 aa11.07□□□□□ -0.64
LINC01004-201ENST00000445184 LRCH3Q96II8 777 aa11.07□□□□□ -0.64
LINC01004-201ENST00000445184 TRIM6-TRIM34B2RNG4 842 aa11.05□□□□□ -0.64
LINC01004-201ENST00000445184 C6orf132Q5T0Z8 1188 aa11.05□□□□□ -0.64
LINC01004-201ENST00000445184 NRG2O14511 850 aaPredicted RBP11.04□□□□□ -0.64
LINC01004-201ENST00000445184 EPAS1Q99814 870 aa11.04□□□□□ -0.64
LINC01004-201ENST00000445184 PRKD2Q9BZL6 878 aa11.02□□□□□ -0.65
LINC01004-201ENST00000445184 PPP4CP60510 307 aa10.99□□□□□ -0.65
LINC01004-201ENST00000445184 V9GY48 417 aaPredicted RBP10.98□□□□□ -0.65
LINC01004-201ENST00000445184 GTPBP6O43824 516 aaPredicted RBP10.96□□□□□ -0.65
LINC01004-201ENST00000445184 TJAP1Q5JTD0 557 aa10.96□□□□□ -0.65
LINC01004-201ENST00000445184 ZNF787Q6DD87 383 aa10.96□□□□□ -0.65
LINC01004-201ENST00000445184 PACS2Q86VP3 889 aa10.95□□□□□ -0.66
LINC01004-201ENST00000445184 RBM33Q96EV2 1170 aaKnown RBP10.95□□□□□ -0.66
LINC01004-201ENST00000445184 PPP1R18Q6NYC8 613 aa10.93□□□□□ -0.66
LINC01004-201ENST00000445184 IL21Q9HBE4 155 aa10.92□□□□□ -0.66
LINC01004-201ENST00000445184 MTRQ99707 1265 aa10.9□□□□□ -0.66
LINC01004-201ENST00000445184 TSKSQ9UJT2 592 aa10.9□□□□□ -0.66
LINC01004-201ENST00000445184 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.89□□□□□ -0.67
LINC01004-201ENST00000445184 PDZRN3Q9UPQ7 1066 aa10.88□□□□□ -0.67
LINC01004-201ENST00000445184 DPYSL4O14531 572 aa10.87□□□□□ -0.67
LINC01004-201ENST00000445184 SAMD7Q7Z3H4 446 aa10.87□□□□□ -0.67
LINC01004-201ENST00000445184 ZNF775Q96BV0 537 aaPredicted RBP10.87□□□□□ -0.67
LINC01004-201ENST00000445184 CAMK2BQ13554 666 aa10.86□□□□□ -0.67
LINC01004-201ENST00000445184 DDX12PQ92771 950 aa10.86□□□□□ -0.67
LINC01004-201ENST00000445184 EN1Q05925 392 aaPredicted RBP10.83□□□□□ -0.68
LINC01004-201ENST00000445184 ZNF516Q92618 1163 aa10.83□□□□□ -0.68
LINC01004-201ENST00000445184 SMAPO00193 183 aa10.82□□□□□ -0.68
LINC01004-201ENST00000445184 MAP3K7O43318 606 aa10.82□□□□□ -0.68
LINC01004-201ENST00000445184 TSR1Q2NL82 804 aaKnown RBP10.82□□□□□ -0.68
LINC01004-201ENST00000445184 CADPS2Q86UW7 1296 aa10.82□□□□□ -0.68
LINC01004-201ENST00000445184 GGCXP38435 758 aa10.8□□□□□ -0.68
LINC01004-201ENST00000445184 NBR1Q14596 966 aa10.8□□□□□ -0.68
LINC01004-201ENST00000445184 CDCA7LQ96GN5 454 aa10.8□□□□□ -0.68
LINC01004-201ENST00000445184 HDGFP51858 240 aaKnown RBP10.78□□□□□ -0.68
LINC01004-201ENST00000445184 PRSS12P56730 875 aa10.78□□□□□ -0.68
LINC01004-201ENST00000445184 NBPF26B4DH59 902 aa10.76□□□□□ -0.69
LINC01004-201ENST00000445184 NKX2-3Q8TAU0 364 aa10.76□□□□□ -0.69
LINC01004-201ENST00000445184 CERKQ8TCT0 537 aa10.76□□□□□ -0.69
LINC01004-201ENST00000445184 TATDN2Q93075 761 aa10.76□□□□□ -0.69
LINC01004-201ENST00000445184 RNF40O75150 1001 aa10.75□□□□□ -0.69
LINC01004-201ENST00000445184 APLP1P51693 650 aa10.75□□□□□ -0.69
LINC01004-201ENST00000445184 FAM198AQ9UFP1 575 aa10.75□□□□□ -0.69
LINC01004-201ENST00000445184 PNMA3Q9UL41 463 aa10.75□□□□□ -0.69
LINC01004-201ENST00000445184 TMUB1Q9BVT8 246 aa10.74□□□□□ -0.69
LINC01004-201ENST00000445184 NECTIN2Q92692 538 aa10.73□□□□□ -0.69
LINC01004-201ENST00000445184 C3orf80F5H4A9 247 aa10.71□□□□□ -0.69
LINC01004-201ENST00000445184 PDIA6Q15084 440 aa10.7□□□□□ -0.7
LINC01004-201ENST00000445184 COPS2P61201 443 aa10.69□□□□□ -0.7
LINC01004-201ENST00000445184 SPDYE16A6NNV3 312 aaPredicted RBP10.68□□□□□ -0.7
LINC01004-201ENST00000445184 PKDCCQ504Y2 493 aa10.68□□□□□ -0.7
LINC01004-201ENST00000445184 NUDT18Q6ZVK8 323 aa10.67□□□□□ -0.7
LINC01004-201ENST00000445184 DGAT1O75907 488 aa10.66□□□□□ -0.7
LINC01004-201ENST00000445184 MYT1Q01538 1121 aa10.66□□□□□ -0.7
LINC01004-201ENST00000445184 TRIM67Q6ZTA4 783 aa10.66□□□□□ -0.7
LINC01004-201ENST00000445184 ZPR1O75312 459 aa10.65□□□□□ -0.7
LINC01004-201ENST00000445184 SLC19A1P41440 591 aa10.65□□□□□ -0.7
LINC01004-201ENST00000445184 SLF2Q8IX21 1173 aa10.64□□□□□ -0.71
LINC01004-201ENST00000445184 RBM27Q9P2N5 1060 aaKnown RBP10.63□□□□□ -0.71
LINC01004-201ENST00000445184 POTECB2RU33 542 aa10.61□□□□□ -0.71
LINC01004-201ENST00000445184 PRIM1P49642 420 aaKnown RBP10.61□□□□□ -0.71
LINC01004-201ENST00000445184 PRR20EP86478 221 aa10.61□□□□□ -0.71
LINC01004-201ENST00000445184 PRR20CP86479 221 aa10.61□□□□□ -0.71
LINC01004-201ENST00000445184 PRR20DP86480 221 aa10.61□□□□□ -0.71
LINC01004-201ENST00000445184 PRR20BP86481 221 aa10.61□□□□□ -0.71
LINC01004-201ENST00000445184 PRR20AP86496 221 aa10.61□□□□□ -0.71
LINC01004-201ENST00000445184 SWT1Q5T5J6 900 aaKnown RBP10.61□□□□□ -0.71
LINC01004-201ENST00000445184 GRXCR2A6NFK2 248 aa10.6□□□□□ -0.71
LINC01004-201ENST00000445184 RNF223E7ERA6 249 aa10.6□□□□□ -0.71
LINC01004-201ENST00000445184 DCAF8L2P0C7V8 631 aa10.6□□□□□ -0.71
LINC01004-201ENST00000445184 SLC4A3P48751 1232 aa10.6□□□□□ -0.71
LINC01004-201ENST00000445184 SPRYD7Q5W111 196 aa10.6□□□□□ -0.71
LINC01004-201ENST00000445184 ZNF598Q86UK7 904 aaKnown RBP10.6□□□□□ -0.71
LINC01004-201ENST00000445184 PRR14Q9BWN1 585 aa10.59□□□□□ -0.71
LINC01004-201ENST00000445184 EMID1Q96A84 441 aaPredicted RBP10.58□□□□□ -0.72
LINC01004-201ENST00000445184 TREML4Q6UXN2 200 aa10.57□□□□□ -0.72
LINC01004-201ENST00000445184 CDHR5Q9HBB8 845 aa10.57□□□□□ -0.72
LINC01004-201ENST00000445184 PCDHB3Q9Y5E6 796 aa10.57□□□□□ -0.72
LINC01004-201ENST00000445184 FAM187AA6NFU0 413 aa10.56□□□□□ -0.72
LINC01004-201ENST00000445184 ANKLE1Q8NAG6 615 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms