RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 VGFO15240 615 aaPredicted RBP28.47■■■□□ 2.15
CTDSPL-206ENST00000443503 PRDM2Q13029 1718 aa28.46■■■□□ 2.15
CTDSPL-206ENST00000443503 CYB5RLQ6IPT4 315 aa28.46■■■□□ 2.15
CTDSPL-206ENST00000443503 EXOC6Q8TAG9 804 aa28.44■■■□□ 2.14
CTDSPL-206ENST00000443503 KCNJ4P48050 445 aa28.43■■■□□ 2.14
CTDSPL-206ENST00000443503 RTN4Q9NQC3 1192 aaKnown RBP28.43■■■□□ 2.14
CTDSPL-206ENST00000443503 APAF1O14727 1248 aa28.42■■■□□ 2.14
CTDSPL-206ENST00000443503 PMFBP1Q8TBY8 1022 aa28.42■■■□□ 2.14
CTDSPL-206ENST00000443503 BCL2L13Q9BXK5 485 aa28.41■■■□□ 2.14
CTDSPL-206ENST00000443503 DEKP35659 375 aaKnown RBP28.41■■■□□ 2.14
CTDSPL-206ENST00000443503 RRP1P56182 461 aaKnown RBP28.41■■■□□ 2.14
CTDSPL-206ENST00000443503 OSCARQ8IYS5 282 aa28.41■■■□□ 2.14
CTDSPL-206ENST00000443503 AFAP1Q8N556 730 aa28.39■■■□□ 2.14
CTDSPL-206ENST00000443503 SLKQ9H2G2 1235 aaPredicted RBP28.39■■■□□ 2.14
CTDSPL-206ENST00000443503 CNTLNQ9NXG0 1405 aa28.38■■■□□ 2.13
CTDSPL-206ENST00000443503 EFCAB5A4FU69 1503 aa28.38■■■□□ 2.13
CTDSPL-206ENST00000443503 CGNL1Q0VF96 1302 aa28.37■■■□□ 2.13
CTDSPL-206ENST00000443503 MINK1Q8N4C8 1332 aaPredicted RBP28.37■■■□□ 2.13
CTDSPL-206ENST00000443503 NGDNQ8NEJ9 315 aaKnown RBP28.37■■■□□ 2.13
CTDSPL-206ENST00000443503 IPO9Q96P70 1041 aaKnown RBP28.37■■■□□ 2.13
CTDSPL-206ENST00000443503 EVC2Q86UK5 1308 aa28.37■■■□□ 2.13
CTDSPL-206ENST00000443503 CC2D2AQ9P2K1 1620 aa28.37■■■□□ 2.13
CTDSPL-206ENST00000443503 PTMAP06454 111 aaKnown RBP28.37■■■□□ 2.13
CTDSPL-206ENST00000443503 EID1Q9Y6B2 187 aa28.36■■■□□ 2.13
CTDSPL-206ENST00000443503 TIAM1Q13009 1591 aa28.35■■■□□ 2.13
CTDSPL-206ENST00000443503 FGD1P98174 961 aa28.35■■■□□ 2.13
CTDSPL-206ENST00000443503 NBPF8Q3BBV2 869 aa28.33■■■□□ 2.13
CTDSPL-206ENST00000443503 BICRAQ9NZM4 1560 aa28.33■■■□□ 2.13
CTDSPL-206ENST00000443503 CRBNQ96SW2 442 aa28.32■■■□□ 2.12
CTDSPL-206ENST00000443503 HFM1A2PYH4 1435 aa28.32■■■□□ 2.12
CTDSPL-206ENST00000443503 E9PSI1 815 aa28.31■■■□□ 2.12
CTDSPL-206ENST00000443503 PRG4Q92954 1404 aaPredicted RBP28.3■■■□□ 2.12
CTDSPL-206ENST00000443503 ELL2O00472 640 aaPredicted RBP28.3■■■□□ 2.12
CTDSPL-206ENST00000443503 STK31Q9BXU1 1019 aa28.3■■■□□ 2.12
CTDSPL-206ENST00000443503 MFAP1P55081 439 aaKnown RBP28.29■■■□□ 2.12
CTDSPL-206ENST00000443503 TAOK2Q9UL54 1235 aa28.28■■■□□ 2.12
CTDSPL-206ENST00000443503 AMPHP49418 695 aa28.27■■■□□ 2.12
CTDSPL-206ENST00000443503 ZRSR1Q15695 479 aaKnown RBP28.27■■■□□ 2.12
CTDSPL-206ENST00000443503 MCCP23508 829 aa28.27■■■□□ 2.12
CTDSPL-206ENST00000443503 MIA2Q96PC5 1412 aa28.26■■■□□ 2.11
CTDSPL-206ENST00000443503 MRC2Q9UBG0 1479 aa28.26■■■□□ 2.11
CTDSPL-206ENST00000443503 LTV1Q96GA3 475 aaPredicted RBP28.26■■■□□ 2.11
CTDSPL-206ENST00000443503 CFAP44Q96MT7 982 aa28.26■■■□□ 2.11
CTDSPL-206ENST00000443503 COG6Q9Y2V7 657 aa28.26■■■□□ 2.11
CTDSPL-206ENST00000443503 PLCB2Q00722 1185 aa28.25■■■□□ 2.11
CTDSPL-206ENST00000443503 LMOD3Q0VAK6 560 aa28.25■■■□□ 2.11
CTDSPL-206ENST00000443503 SLC4A10Q6U841 1118 aa28.25■■■□□ 2.11
CTDSPL-206ENST00000443503 PDE4AP27815 886 aa28.25■■■□□ 2.11
CTDSPL-206ENST00000443503 NBPF1Q3BBV0 1214 aa28.24■■■□□ 2.11
CTDSPL-206ENST00000443503 EHBP1L1Q8N3D4 1523 aa28.24■■■□□ 2.11
CTDSPL-206ENST00000443503 SYNJ2O15056 1496 aa28.24■■■□□ 2.11
CTDSPL-206ENST00000443503 CENPQQ7L2Z9 268 aaPredicted RBP28.24■■■□□ 2.11
CTDSPL-206ENST00000443503 STAC3Q96MF2 364 aa28.24■■■□□ 2.11
CTDSPL-206ENST00000443503 CSB-PGBD3P0DP91 1061 aa28.23■■■□□ 2.11
CTDSPL-206ENST00000443503 NAP1L2Q9ULW6 460 aaPredicted RBP28.23■■■□□ 2.11
CTDSPL-206ENST00000443503 GLIPR1L2Q4G1C9 344 aa28.22■■■□□ 2.11
CTDSPL-206ENST00000443503 TROQ12816 1431 aaPredicted RBP28.22■■■□□ 2.11
CTDSPL-206ENST00000443503 IFT140Q96RY7 1462 aa28.21■■■□□ 2.11
CTDSPL-206ENST00000443503 DNAJC5BQ9UF47 199 aa28.21■■■□□ 2.11
CTDSPL-206ENST00000443503 DNMBPQ6XZF7 1577 aa28.21■■■□□ 2.11
CTDSPL-206ENST00000443503 TMEM132EQ6IEE7 984 aa28.2■■■□□ 2.1
CTDSPL-206ENST00000443503 CFAP70Q5T0N1 1121 aa28.19■■■□□ 2.1
CTDSPL-206ENST00000443503 COG3Q96JB2 828 aa28.19■■■□□ 2.1
CTDSPL-206ENST00000443503 ARHGAP5Q13017 1502 aa28.19■■■□□ 2.1
CTDSPL-206ENST00000443503 ZKSCAN2Q63HK3 967 aa28.17■■■□□ 2.1
CTDSPL-206ENST00000443503 C9orf84Q5VXU9 1444 aa28.17■■■□□ 2.1
CTDSPL-206ENST00000443503 DNTTIP2Q5QJE6 756 aaKnown RBP28.16■■■□□ 2.1
CTDSPL-206ENST00000443503 KIAA1107Q9UPP5 1409 aa28.16■■■□□ 2.1
CTDSPL-206ENST00000443503 HMMRO75330 724 aa28.15■■■□□ 2.1
CTDSPL-206ENST00000443503 KIAA1211Q6ZU35 1233 aa28.15■■■□□ 2.1
CTDSPL-206ENST00000443503 NAIPQ13075 1403 aa28.14■■■□□ 2.1
CTDSPL-206ENST00000443503 SNAPC4Q5SXM2 1469 aa28.14■■■□□ 2.1
CTDSPL-206ENST00000443503 ABCA10Q8WWZ4 1543 aa28.14■■■□□ 2.1
CTDSPL-206ENST00000443503 GZF1Q9H116 711 aaPredicted RBP28.14■■■□□ 2.1
CTDSPL-206ENST00000443503 ADAMTS8Q9UP79 889 aa28.13■■■□□ 2.09
CTDSPL-206ENST00000443503 NPHP1O15259 732 aa28.12■■■□□ 2.09
CTDSPL-206ENST00000443503 FAM69CQ0P6D2 419 aa28.12■■■□□ 2.09
CTDSPL-206ENST00000443503 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.12■■■□□ 2.092e-7■■■■■ 32.5
CTDSPL-206ENST00000443503 BRD4O60885 1362 aaPredicted RBP28.12■■■□□ 2.09
CTDSPL-206ENST00000443503 DIAPH1O60610 1272 aaKnown RBP28.12■■■□□ 2.09
CTDSPL-206ENST00000443503 FAM161AQ3B820 660 aa28.12■■■□□ 2.09
CTDSPL-206ENST00000443503 ZNF330Q9Y3S2 320 aaPredicted RBP28.12■■■□□ 2.09
CTDSPL-206ENST00000443503 CHMP4AQ9BY43 222 aa28.11■■■□□ 2.09
CTDSPL-206ENST00000443503 NGEFQ8N5V2 710 aa28.11■■■□□ 2.09
CTDSPL-206ENST00000443503 GOLGA6L4A6NEF3 574 aa28.1■■■□□ 2.09
CTDSPL-206ENST00000443503 WDR97A6NE52 1622 aa28.1■■■□□ 2.09
CTDSPL-206ENST00000443503 CDK13Q14004 1512 aaKnown RBP28.09■■■□□ 2.09
CTDSPL-206ENST00000443503 SLC4A3P48751 1232 aa28.09■■■□□ 2.09
CTDSPL-206ENST00000443503 L1TD1Q5T7N2 865 aaKnown RBP28.09■■■□□ 2.09
CTDSPL-206ENST00000443503 DAPK1P53355 1430 aa28.09■■■□□ 2.09
CTDSPL-206ENST00000443503 CDCA7LQ96GN5 454 aa28.09■■■□□ 2.09
CTDSPL-206ENST00000443503 GGNBP2Q9H3C7 697 aa28.09■■■□□ 2.09
CTDSPL-206ENST00000443503 GBP4Q96PP9 640 aa28.08■■■□□ 2.09
CTDSPL-206ENST00000443503 NAP1L5Q96NT1 182 aaPredicted RBP28.08■■■□□ 2.09
CTDSPL-206ENST00000443503 EPRSP07814 1512 aaKnown RBP28.07■■■□□ 2.08
CTDSPL-206ENST00000443503 TRIM6-TRIM34B2RNG4 842 aa28.07■■■□□ 2.08
CTDSPL-206ENST00000443503 RIPK4P57078 832 aa28.07■■■□□ 2.08
CTDSPL-206ENST00000443503 RUNDC1Q96C34 613 aa28.07■■■□□ 2.08
CTDSPL-206ENST00000443503 CCDC184Q52MB2 194 aa28.06■■■□□ 2.08
CTDSPL-206ENST00000443503 CABP2Q9NPB3 220 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms