RNA–Protein interactions for RNA: ENST00000440126.7

APP-209, Transcript of amyloid beta precursor protein, humanhuman

TSL 2 BASIC

Gene APP, Length 2,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-209ENST00000440126 PODXL2Q9NZ53 605 aa10.93□□□□□ -0.66
APP-209ENST00000440126 MYO5CQ9NQX4 1742 aa10.92□□□□□ -0.66
APP-209ENST00000440126 NBPF1Q3BBV0 1214 aa10.92□□□□□ -0.66
APP-209ENST00000440126 ST20-MTHFSA0A0A6YYL1 179 aa10.91□□□□□ -0.66
APP-209ENST00000440126 CCER2I3L3R5 266 aa10.91□□□□□ -0.66
APP-209ENST00000440126 IRX6P78412 446 aaPredicted RBP10.91□□□□□ -0.66
APP-209ENST00000440126 FKBP8Q14318 412 aa10.91□□□□□ -0.66
APP-209ENST00000440126 FAM135AQ9P2D6 1515 aa10.91□□□□□ -0.66
APP-209ENST00000440126 ARHGEF5Q12774 1597 aa10.91□□□□□ -0.66
APP-209ENST00000440126 CNTLNQ9NXG0 1405 aa10.9□□□□□ -0.66
APP-209ENST00000440126 SENP3Q9H4L4 574 aaPredicted RBP10.9□□□□□ -0.66
APP-209ENST00000440126 MRS2Q9HD23 443 aa10.9□□□□□ -0.66
APP-209ENST00000440126 SPAG9O60271 1321 aaKnown RBP10.9□□□□□ -0.67
APP-209ENST00000440126 PLCH2O75038 1416 aa10.89□□□□□ -0.67
APP-209ENST00000440126 SPATA31E1Q6ZUB1 1445 aa10.89□□□□□ -0.67
APP-209ENST00000440126 PRKRIP1Q9H875 184 aaPredicted RBP10.89□□□□□ -0.67
APP-209ENST00000440126 BCORL1Q5H9F3 1711 aa10.89□□□□□ -0.67
APP-209ENST00000440126 CCDC144AA2RUR9 1427 aa10.88□□□□□ -0.67
APP-209ENST00000440126 RSPH4AQ5TD94 716 aa10.87□□□□□ -0.67
APP-209ENST00000440126 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.87□□□□□ -0.67
APP-209ENST00000440126 OSCARQ8IYS5 282 aa10.87□□□□□ -0.67
APP-209ENST00000440126 PLA2R1Q13018 1463 aa10.87□□□□□ -0.67
APP-209ENST00000440126 ROCK2O75116 1388 aaKnown RBP10.86□□□□□ -0.67
APP-209ENST00000440126 KIF3BO15066 747 aa10.86□□□□□ -0.67
APP-209ENST00000440126 SCAPERQ9BY12 1400 aa10.85□□□□□ -0.67
APP-209ENST00000440126 PKNOX2Q96KN3 472 aa10.85□□□□□ -0.67
APP-209ENST00000440126 ASXL2Q76L83 1435 aa10.84□□□□□ -0.67
APP-209ENST00000440126 WDR7Q9Y4E6 1490 aa10.84□□□□□ -0.67
APP-209ENST00000440126 ABCC1P33527 1531 aa10.84□□□□□ -0.67
APP-209ENST00000440126 AEBP2Q6ZN18 517 aaPredicted RBP10.83□□□□□ -0.68
APP-209ENST00000440126 FANCAO15360 1455 aa10.83□□□□□ -0.68
APP-209ENST00000440126 NPM1P06748 294 aaKnown RBP eCLIP10.83□□□□□ -0.68
APP-209ENST00000440126 UHRF1BP1LA0JNW5 1464 aa10.83□□□□□ -0.68
APP-209ENST00000440126 KDM5DQ9BY66 1539 aa10.83□□□□□ -0.68
APP-209ENST00000440126 KDM5CP41229 1560 aa10.82□□□□□ -0.68
APP-209ENST00000440126 A2MP01023 1474 aa10.81□□□□□ -0.68
APP-209ENST00000440126 CFAP65Q6ZU64 1925 aaKnown RBP10.81□□□□□ -0.68
APP-209ENST00000440126 ADGRL1O94910 1474 aa10.8□□□□□ -0.68
APP-209ENST00000440126 RALGAPBQ86X10 1494 aa10.8□□□□□ -0.68
APP-209ENST00000440126 CHGAP10645 457 aaKnown RBP10.8□□□□□ -0.68
APP-209ENST00000440126 CYB5RLQ6IPT4 315 aa10.8□□□□□ -0.68
APP-209ENST00000440126 DUOX2Q9NRD8 1548 aa10.8□□□□□ -0.68
APP-209ENST00000440126 GGT6Q6P531 493 aa10.8□□□□□ -0.68
APP-209ENST00000440126 DHX29Q7Z478 1369 aaKnown RBP10.79□□□□□ -0.68
APP-209ENST00000440126 RAPGEF3O95398 923 aa10.79□□□□□ -0.68
APP-209ENST00000440126 MAST1Q9Y2H9 1570 aa10.79□□□□□ -0.68
APP-209ENST00000440126 NEFLP07196 543 aa10.79□□□□□ -0.68
APP-209ENST00000440126 UNC13BO14795 1591 aa10.79□□□□□ -0.68
APP-209ENST00000440126 UHRF1BP1Q6BDS2 1440 aa10.78□□□□□ -0.68
APP-209ENST00000440126 PRAG1Q86YV5 1406 aa10.78□□□□□ -0.68
APP-209ENST00000440126 PLXNC1O60486 1568 aa10.78□□□□□ -0.68
APP-209ENST00000440126 CC2D1BQ5T0F9 858 aaKnown RBP10.77□□□□□ -0.68
APP-209ENST00000440126 NUTM2DQ5VT03 806 aaPredicted RBP10.77□□□□□ -0.68
APP-209ENST00000440126 ZFYVE16Q7Z3T8 1539 aa10.77□□□□□ -0.68
APP-209ENST00000440126 UGGT1Q9NYU2 1555 aa10.77□□□□□ -0.69
APP-209ENST00000440126 ERBINQ96RT1 1412 aa10.76□□□□□ -0.69
APP-209ENST00000440126 IQGAP3Q86VI3 1631 aa10.76□□□□□ -0.69
APP-209ENST00000440126 DISP3Q9P2K9 1392 aa10.76□□□□□ -0.69
APP-209ENST00000440126 ATP7AQ04656 1500 aa10.75□□□□□ -0.69
APP-209ENST00000440126 E9PCH4 1651 aa10.74□□□□□ -0.69
APP-209ENST00000440126 TMC1Q8TDI8 760 aa10.74□□□□□ -0.69
APP-209ENST00000440126 POLR1AO95602 1720 aaPredicted RBP10.73□□□□□ -0.69
APP-209ENST00000440126 CD109Q6YHK3 1445 aa10.73□□□□□ -0.69
APP-209ENST00000440126 ATP10AO60312 1499 aa10.73□□□□□ -0.69
APP-209ENST00000440126 TRPM1Q7Z4N2 1603 aa10.73□□□□□ -0.69
APP-209ENST00000440126 ABCA9Q8IUA7 1624 aa10.72□□□□□ -0.69
APP-209ENST00000440126 CFAP70Q5T0N1 1121 aa10.72□□□□□ -0.69
APP-209ENST00000440126 TESK2Q96S53 571 aa10.72□□□□□ -0.69
APP-209ENST00000440126 PANK3Q9H999 370 aa10.71□□□□□ -0.69
APP-209ENST00000440126 MAGI2Q86UL8 1455 aa10.71□□□□□ -0.7
APP-209ENST00000440126 KANK1Q14678 1352 aa10.7□□□□□ -0.7
APP-209ENST00000440126 ADGRF5Q8IZF2 1346 aa10.7□□□□□ -0.7
APP-209ENST00000440126 CLTCL1P53675 1640 aa10.69□□□□□ -0.7
APP-209ENST00000440126 RTN4Q9NQC3 1192 aaKnown RBP10.69□□□□□ -0.7
APP-209ENST00000440126 INO80Q9ULG1 1556 aaPredicted RBP10.69□□□□□ -0.7
APP-209ENST00000440126 RTEL1-TNFRSF6BF6WH68 1400 aa10.69□□□□□ -0.7
APP-209ENST00000440126 ERICH6BQ5W0A0 696 aa10.68□□□□□ -0.7
APP-209ENST00000440126 KIDINS220Q9ULH0 1771 aa10.68□□□□□ -0.7
APP-209ENST00000440126 PNISRQ8TF01 805 aaKnown RBP10.67□□□□□ -0.7
APP-209ENST00000440126 TMF1P82094 1093 aa10.67□□□□□ -0.7
APP-209ENST00000440126 TMEM132EQ6IEE7 984 aa10.67□□□□□ -0.7
APP-209ENST00000440126 WASHC2CQ9Y4E1 1318 aa10.67□□□□□ -0.7
APP-209ENST00000440126 SPHKAPQ2M3C7 1700 aa10.66□□□□□ -0.7
APP-209ENST00000440126 CEP152O94986 1710 aa10.66□□□□□ -0.7
APP-209ENST00000440126 ZBED9Q6R2W3 1325 aa10.65□□□□□ -0.7
APP-209ENST00000440126 PER1O15534 1290 aaPredicted RBP10.65□□□□□ -0.7
APP-209ENST00000440126 PRDM15P57071 1507 aaPredicted RBP10.65□□□□□ -0.7
APP-209ENST00000440126 ARAP3Q8WWN8 1544 aa10.65□□□□□ -0.7
APP-209ENST00000440126 MROH1Q8NDA8 1641 aa10.65□□□□□ -0.7
APP-209ENST00000440126 SAFB2Q14151 953 aaKnown RBP eCLIP10.65□□□□□ -0.71
APP-209ENST00000440126 B4GALNT3Q6L9W6 998 aa10.65□□□□□ -0.71
APP-209ENST00000440126 TRAK1Q9UPV9 953 aa10.65□□□□□ -0.71
APP-209ENST00000440126 GPRASP1Q5JY77 1395 aa10.65□□□□□ -0.71
APP-209ENST00000440126 ZNF518AQ6AHZ1 1483 aa10.64□□□□□ -0.71
APP-209ENST00000440126 FAM69CQ0P6D2 419 aa10.64□□□□□ -0.71
APP-209ENST00000440126 TRPM2O94759 1503 aa10.64□□□□□ -0.71
APP-209ENST00000440126 MYBBP1AQ9BQG0 1328 aaKnown RBP10.64□□□□□ -0.71
APP-209ENST00000440126 MLECQ14165 292 aa10.64□□□□□ -0.71
APP-209ENST00000440126 ARID4BQ4LE39 1312 aaPredicted RBP10.64□□□□□ -0.71
APP-209ENST00000440126 COL17A1Q9UMD9 1497 aaPredicted RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms