RNA–Protein interactions for RNA: ENST00000435142.1

USP9YP28-201, Transcript of USP9Y pseudogene 28, humanhuman

BASIC

Gene USP9YP28, Length 589 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9YP28-201ENST00000435142 ANKK1Q8NFD2 765 aa13.52□□□□□ -0.25
USP9YP28-201ENST00000435142 FBXW7Q969H0 707 aa13.52□□□□□ -0.25
USP9YP28-201ENST00000435142 CADPS2Q86UW7 1296 aa13.47□□□□□ -0.25
USP9YP28-201ENST00000435142 LAPTM4BQ86VI4 370 aa13.47□□□□□ -0.25
USP9YP28-201ENST00000435142 DCAF8L2P0C7V8 631 aa13.46□□□□□ -0.25
USP9YP28-201ENST00000435142 BCAMP50895 628 aa13.46□□□□□ -0.25
USP9YP28-201ENST00000435142 KIAA1468Q9P260 1216 aa13.46□□□□□ -0.25
USP9YP28-201ENST00000435142 SOWAHBA6NEL2 793 aa13.44□□□□□ -0.26
USP9YP28-201ENST00000435142 ITGBL1O95965 494 aaPredicted RBP13.44□□□□□ -0.26
USP9YP28-201ENST00000435142 ONECUT3O60422 494 aaPredicted RBP13.43□□□□□ -0.26
USP9YP28-201ENST00000435142 ZFRQ96KR1 1074 aaKnown RBP13.43□□□□□ -0.26
USP9YP28-201ENST00000435142 C6orf132Q5T0Z8 1188 aa13.42□□□□□ -0.26
USP9YP28-201ENST00000435142 EPAS1Q99814 870 aa13.42□□□□□ -0.26
USP9YP28-201ENST00000435142 NYAP1Q6ZVC0 841 aa13.4□□□□□ -0.26
USP9YP28-201ENST00000435142 CAMK2BQ13554 666 aa13.39□□□□□ -0.27
USP9YP28-201ENST00000435142 DPYSL4O14531 572 aa13.38□□□□□ -0.27
USP9YP28-201ENST00000435142 WBP1LQ9NX94 342 aa13.38□□□□□ -0.27
USP9YP28-201ENST00000435142 SEPT9Q9UHD8 586 aaPredicted RBP13.37□□□□□ -0.27
USP9YP28-201ENST00000435142 TRIM6-TRIM34B2RNG4 842 aa13.35□□□□□ -0.27
USP9YP28-201ENST00000435142 KCNC4Q03721 635 aa13.34□□□□□ -0.27
USP9YP28-201ENST00000435142 RBM33Q96EV2 1170 aaKnown RBP13.34□□□□□ -0.27
USP9YP28-201ENST00000435142 FAM98CQ17RN3 349 aaKnown RBP13.33□□□□□ -0.28
USP9YP28-201ENST00000435142 DDX12PQ92771 950 aa13.31□□□□□ -0.28
USP9YP28-201ENST00000435142 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.3□□□□□ -0.28
USP9YP28-201ENST00000435142 TSR3Q9UJK0 312 aaKnown RBP13.29□□□□□ -0.28
USP9YP28-201ENST00000435142 LRCH3Q96II8 777 aa13.28□□□□□ -0.28
USP9YP28-201ENST00000435142 HPS5Q9UPZ3 1129 aa13.27□□□□□ -0.29
USP9YP28-201ENST00000435142 PACS2Q86VP3 889 aa13.25□□□□□ -0.29
USP9YP28-201ENST00000435142 Q6ZNB5 142 aa13.23□□□□□ -0.29
USP9YP28-201ENST00000435142 MAP3K7O43318 606 aa13.22□□□□□ -0.29
USP9YP28-201ENST00000435142 EN1Q05925 392 aaPredicted RBP13.22□□□□□ -0.29
USP9YP28-201ENST00000435142 NBR1Q14596 966 aa13.22□□□□□ -0.29
USP9YP28-201ENST00000435142 TSKSQ9UJT2 592 aa13.22□□□□□ -0.29
USP9YP28-201ENST00000435142 TSR1Q2NL82 804 aaKnown RBP13.21□□□□□ -0.29
USP9YP28-201ENST00000435142 PPP4CP60510 307 aa13.19□□□□□ -0.3
USP9YP28-201ENST00000435142 PDIA6Q15084 440 aa13.17□□□□□ -0.3
USP9YP28-201ENST00000435142 SPDYE16A6NNV3 312 aaPredicted RBP13.15□□□□□ -0.3
USP9YP28-201ENST00000435142 CDCA7LQ96GN5 454 aa13.14□□□□□ -0.31
USP9YP28-201ENST00000435142 SMAPO00193 183 aa13.13□□□□□ -0.31
USP9YP28-201ENST00000435142 SAMD7Q7Z3H4 446 aa13.13□□□□□ -0.31
USP9YP28-201ENST00000435142 BBXQ8WY36 941 aaPredicted RBP13.13□□□□□ -0.31
USP9YP28-201ENST00000435142 PRSS12P56730 875 aa13.12□□□□□ -0.31
USP9YP28-201ENST00000435142 LAPTM4AQ15012 233 aa13.12□□□□□ -0.31
USP9YP28-201ENST00000435142 TJAP1Q5JTD0 557 aa13.11□□□□□ -0.31
USP9YP28-201ENST00000435142 CERKQ8TCT0 537 aa13.1□□□□□ -0.31
USP9YP28-201ENST00000435142 FAM198AQ9UFP1 575 aa13.1□□□□□ -0.31
USP9YP28-201ENST00000435142 GFRA3O60609 400 aa13.08□□□□□ -0.32
USP9YP28-201ENST00000435142 TATDN2Q93075 761 aa13.08□□□□□ -0.32
USP9YP28-201ENST00000435142 GRXCR2A6NFK2 248 aa13.06□□□□□ -0.32
USP9YP28-201ENST00000435142 PRIM1P49642 420 aaKnown RBP13.06□□□□□ -0.32
USP9YP28-201ENST00000435142 PNMA3Q9UL41 463 aa13.06□□□□□ -0.32
USP9YP28-201ENST00000435142 C3orf80F5H4A9 247 aa13.05□□□□□ -0.32
USP9YP28-201ENST00000435142 E2F4Q16254 413 aa13.05□□□□□ -0.32
USP9YP28-201ENST00000435142 IL21Q9HBE4 155 aa13.05□□□□□ -0.32
USP9YP28-201ENST00000435142 NBPF26B4DH59 902 aa13.04□□□□□ -0.32
USP9YP28-201ENST00000435142 MTRQ99707 1265 aa13.04□□□□□ -0.32
USP9YP28-201ENST00000435142 PRKD2Q9BZL6 878 aa13.04□□□□□ -0.32
USP9YP28-201ENST00000435142 TRAF7Q6Q0C0 670 aa13.03□□□□□ -0.32
USP9YP28-201ENST00000435142 SPRYD3Q8NCJ5 442 aa13.03□□□□□ -0.32
USP9YP28-201ENST00000435142 HDGFP51858 240 aaKnown RBP13.02□□□□□ -0.33
USP9YP28-201ENST00000435142 PPP1R18Q6NYC8 613 aa13.01□□□□□ -0.33
USP9YP28-201ENST00000435142 ARIH1Q9Y4X5 557 aaPredicted RBP13.01□□□□□ -0.33
USP9YP28-201ENST00000435142 NUDT18Q6ZVK8 323 aa13□□□□□ -0.33
USP9YP28-201ENST00000435142 LCE2BO14633 110 aa12.99□□□□□ -0.33
USP9YP28-201ENST00000435142 ZNF516Q92618 1163 aa12.98□□□□□ -0.33
USP9YP28-201ENST00000435142 WDR70Q9NW82 654 aa12.98□□□□□ -0.33
USP9YP28-201ENST00000435142 RNF40O75150 1001 aa12.97□□□□□ -0.33
USP9YP28-201ENST00000435142 OSBPP22059 807 aa12.97□□□□□ -0.33
USP9YP28-201ENST00000435142 CDHR5Q9HBB8 845 aa12.97□□□□□ -0.33
USP9YP28-201ENST00000435142 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.96□□□□□ -0.33
USP9YP28-201ENST00000435142 V9GY48 417 aaPredicted RBP12.96□□□□□ -0.33
USP9YP28-201ENST00000435142 APLP1P51693 650 aa12.95□□□□□ -0.34
USP9YP28-201ENST00000435142 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.95□□□□□ -0.34
USP9YP28-201ENST00000435142 RBM27Q9P2N5 1060 aaKnown RBP12.95□□□□□ -0.34
USP9YP28-201ENST00000435142 NRG2O14511 850 aaPredicted RBP12.94□□□□□ -0.34
USP9YP28-201ENST00000435142 NKX2-3Q8TAU0 364 aa12.9□□□□□ -0.34
USP9YP28-201ENST00000435142 NECTIN2Q92692 538 aa12.9□□□□□ -0.34
USP9YP28-201ENST00000435142 TTC13Q8NBP0 860 aa12.89□□□□□ -0.35
USP9YP28-201ENST00000435142 SWT1Q5T5J6 900 aaKnown RBP12.88□□□□□ -0.35
USP9YP28-201ENST00000435142 PADI6Q6TGC4 694 aa12.87□□□□□ -0.35
USP9YP28-201ENST00000435142 SLF2Q8IX21 1173 aa12.87□□□□□ -0.35
USP9YP28-201ENST00000435142 GGCXP38435 758 aa12.86□□□□□ -0.35
USP9YP28-201ENST00000435142 COPS2P61201 443 aa12.86□□□□□ -0.35
USP9YP28-201ENST00000435142 NPDC1Q9NQX5 325 aaPredicted RBP12.86□□□□□ -0.35
USP9YP28-201ENST00000435142 CFAP44Q96MT7 982 aa12.85□□□□□ -0.35
USP9YP28-201ENST00000435142 PDZRN3Q9UPQ7 1066 aa12.85□□□□□ -0.35
USP9YP28-201ENST00000435142 PAXIP1Q6ZW49 1069 aaPredicted RBP12.84□□□□□ -0.35
USP9YP28-201ENST00000435142 SLC4A3P48751 1232 aa12.82□□□□□ -0.36
USP9YP28-201ENST00000435142 TMUB1Q9BVT8 246 aa12.82□□□□□ -0.36
USP9YP28-201ENST00000435142 EYA1Q99502 592 aa12.8□□□□□ -0.36
USP9YP28-201ENST00000435142 ZPR1O75312 459 aa12.79□□□□□ -0.36
USP9YP28-201ENST00000435142 ZNF787Q6DD87 383 aa12.78□□□□□ -0.36
USP9YP28-201ENST00000435142 PRR14Q9BWN1 585 aa12.76□□□□□ -0.37
USP9YP28-201ENST00000435142 PCDHB3Q9Y5E6 796 aa12.75□□□□□ -0.37
USP9YP28-201ENST00000435142 RNF223E7ERA6 249 aa12.7□□□□□ -0.38
USP9YP28-201ENST00000435142 SLC19A1P41440 591 aa12.7□□□□□ -0.38
USP9YP28-201ENST00000435142 BLOC1S3Q6QNY0 202 aa12.7□□□□□ -0.38
USP9YP28-201ENST00000435142 DNAJB2P25686 324 aa12.67□□□□□ -0.38
USP9YP28-201ENST00000435142 MLLT3P42568 568 aaPredicted RBP12.67□□□□□ -0.38
USP9YP28-201ENST00000435142 TRIM67Q6ZTA4 783 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms