RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 POTEB2H3BUK9 544 aa6.49□□□□□ -1.37
HMGB1P27-201ENST00000431429 TSR1Q2NL82 804 aaKnown RBP6.49□□□□□ -1.37
HMGB1P27-201ENST00000431429 FBXW7Q969H0 707 aa6.49□□□□□ -1.37
HMGB1P27-201ENST00000431429 DDRGK1Q96HY6 314 aa6.49□□□□□ -1.37
HMGB1P27-201ENST00000431429 REPIN1Q9BWE0 567 aaKnown RBP6.49□□□□□ -1.37
HMGB1P27-201ENST00000431429 C14orf37Q86TY3 774 aa6.48□□□□□ -1.37
HMGB1P27-201ENST00000431429 GOPCQ9HD26 462 aa6.48□□□□□ -1.37
HMGB1P27-201ENST00000431429 MAP3K7O43318 606 aa6.47□□□□□ -1.37
HMGB1P27-201ENST00000431429 GPR153Q6NV75 609 aa6.47□□□□□ -1.37
HMGB1P27-201ENST00000431429 PHOX2BQ99453 314 aa6.47□□□□□ -1.37
HMGB1P27-201ENST00000431429 ZSWIM6Q9HCJ5 1215 aa6.47□□□□□ -1.37
HMGB1P27-201ENST00000431429 RBM27Q9P2N5 1060 aaKnown RBP6.47□□□□□ -1.37
HMGB1P27-201ENST00000431429 MS4A1P11836 297 aa6.46□□□□□ -1.38
HMGB1P27-201ENST00000431429 GIGYF2Q6Y7W6 1299 aaKnown RBP6.46□□□□□ -1.38
HMGB1P27-201ENST00000431429 C6orf132Q5T0Z8 1188 aa6.45□□□□□ -1.38
HMGB1P27-201ENST00000431429 CERKQ8TCT0 537 aa6.45□□□□□ -1.38
HMGB1P27-201ENST00000431429 DOK7Q18PE1 504 aa6.44□□□□□ -1.38
HMGB1P27-201ENST00000431429 ZDHHC16Q969W1 377 aa6.44□□□□□ -1.38
HMGB1P27-201ENST00000431429 RBM33Q96EV2 1170 aaKnown RBP6.44□□□□□ -1.38
HMGB1P27-201ENST00000431429 KHSRPQ92945 711 aaKnown RBP eCLIP6.43□□□□□ -1.38
HMGB1P27-201ENST00000431429 ADAM33Q9BZ11 813 aa6.43□□□□□ -1.38
HMGB1P27-201ENST00000431429 ADGRG1Q9Y653 693 aa6.43□□□□□ -1.38
HMGB1P27-201ENST00000431429 ONECUT3O60422 494 aaPredicted RBP6.42□□□□□ -1.38
HMGB1P27-201ENST00000431429 NUDT7P0C024 238 aa6.42□□□□□ -1.38
HMGB1P27-201ENST00000431429 CLCN1P35523 988 aa6.42□□□□□ -1.38
HMGB1P27-201ENST00000431429 ARSIQ5FYB1 569 aa6.42□□□□□ -1.38
HMGB1P27-201ENST00000431429 METTL3Q86U44 580 aaKnown RBP6.42□□□□□ -1.38
HMGB1P27-201ENST00000431429 PXYLP1Q8TE99 480 aa6.42□□□□□ -1.38
HMGB1P27-201ENST00000431429 GPCPD1Q9NPB8 672 aa6.42□□□□□ -1.38
HMGB1P27-201ENST00000431429 TTLL12Q14166 644 aaPredicted RBP6.41□□□□□ -1.38
HMGB1P27-201ENST00000431429 PADI6Q6TGC4 694 aa6.41□□□□□ -1.38
HMGB1P27-201ENST00000431429 ZNF454Q8N9F8 522 aa6.41□□□□□ -1.38
HMGB1P27-201ENST00000431429 OATP04181 439 aa6.4□□□□□ -1.38
HMGB1P27-201ENST00000431429 FAM217BQ9NTX9 383 aaPredicted RBP6.4□□□□□ -1.38
HMGB1P27-201ENST00000431429 SH3D19Q5HYK7 790 aa6.39□□□□□ -1.39
HMGB1P27-201ENST00000431429 BCL2L12Q9HB09 334 aa6.39□□□□□ -1.39
HMGB1P27-201ENST00000431429 FAM198AQ9UFP1 575 aa6.39□□□□□ -1.39
HMGB1P27-201ENST00000431429 PRSS12P56730 875 aa6.38□□□□□ -1.39
HMGB1P27-201ENST00000431429 MDM2Q00987 491 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P27-201ENST00000431429 FAM161AQ3B820 660 aa6.38□□□□□ -1.39
HMGB1P27-201ENST00000431429 MAMSTRQ6ZN01 415 aa6.38□□□□□ -1.39
HMGB1P27-201ENST00000431429 LHX6Q9UPM6 363 aa6.38□□□□□ -1.39
HMGB1P27-201ENST00000431429 RIMBP2O15034 1052 aa6.37□□□□□ -1.39
HMGB1P27-201ENST00000431429 SSTR3P32745 418 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P27-201ENST00000431429 CDCA7LQ96GN5 454 aa6.37□□□□□ -1.39
HMGB1P27-201ENST00000431429 PSDA5PKW4 1024 aaPredicted RBP6.36□□□□□ -1.39
HMGB1P27-201ENST00000431429 HOXB1P14653 301 aaPredicted RBP6.36□□□□□ -1.39
HMGB1P27-201ENST00000431429 COL9A1P20849 921 aa6.36□□□□□ -1.39
HMGB1P27-201ENST00000431429 EYA1Q99502 592 aa6.36□□□□□ -1.39
HMGB1P27-201ENST00000431429 ZMYND15Q9H091 742 aa6.36□□□□□ -1.39
HMGB1P27-201ENST00000431429 SCUBE2Q9NQ36 999 aa6.36□□□□□ -1.39
HMGB1P27-201ENST00000431429 PPP1R3GB7ZBB8 358 aa6.35□□□□□ -1.39
HMGB1P27-201ENST00000431429 ARXQ96QS3 562 aa6.35□□□□□ -1.39
HMGB1P27-201ENST00000431429 C3orf80F5H4A9 247 aa6.34□□□□□ -1.39
HMGB1P27-201ENST00000431429 SKIV2LQ15477 1246 aaKnown RBP6.34□□□□□ -1.39
HMGB1P27-201ENST00000431429 PPP4R3BQ5MIZ7 849 aa6.34□□□□□ -1.39
HMGB1P27-201ENST00000431429 NLRP7Q8WX94 980 aa6.34□□□□□ -1.39
HMGB1P27-201ENST00000431429 TSKSQ9UJT2 592 aa6.34□□□□□ -1.39
HMGB1P27-201ENST00000431429 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.33□□□□□ -1.4
HMGB1P27-201ENST00000431429 FLIIQ13045 1269 aa6.33□□□□□ -1.4
HMGB1P27-201ENST00000431429 BEGAINQ9BUH8 593 aa6.33□□□□□ -1.4
HMGB1P27-201ENST00000431429 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.33□□□□□ -1.4
HMGB1P27-201ENST00000431429 MYSM1Q5VVJ2 828 aa6.32□□□□□ -1.4
HMGB1P27-201ENST00000431429 ZNF710Q8N1W2 664 aa6.32□□□□□ -1.4
HMGB1P27-201ENST00000431429 RBM46Q8TBY0 533 aaKnown RBP6.32□□□□□ -1.4
HMGB1P27-201ENST00000431429 PCMTD1Q96MG8 357 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P27-201ENST00000431429 RSPH6AQ9H0K4 717 aa6.32□□□□□ -1.4
HMGB1P27-201ENST00000431429 RCCD1A6NED2 376 aa6.3□□□□□ -1.4
HMGB1P27-201ENST00000431429 TRIM6-TRIM34B2RNG4 842 aa6.3□□□□□ -1.4
HMGB1P27-201ENST00000431429 SUPT5HO00267 1087 aaKnown RBP6.3□□□□□ -1.4
HMGB1P27-201ENST00000431429 SNPHO15079 494 aa6.3□□□□□ -1.4
HMGB1P27-201ENST00000431429 CD46P15529 392 aa6.3□□□□□ -1.4
HMGB1P27-201ENST00000431429 PTPREP23469 700 aa6.3□□□□□ -1.4
HMGB1P27-201ENST00000431429 TUSC1Q2TAM9 212 aa6.3□□□□□ -1.4
HMGB1P27-201ENST00000431429 OTUD5Q96G74 571 aa6.3□□□□□ -1.4
HMGB1P27-201ENST00000431429 MCM6Q14566 821 aa6.29□□□□□ -1.4
HMGB1P27-201ENST00000431429 FBXO31Q5XUX0 539 aaPredicted RBP6.29□□□□□ -1.4
HMGB1P27-201ENST00000431429 PROCA1Q8NCQ7 364 aaPredicted RBP6.29□□□□□ -1.4
HMGB1P27-201ENST00000431429 TBC1D2Q9BYX2 928 aa6.28□□□□□ -1.4
HMGB1P27-201ENST00000431429 TMEM134Q9H6X4 195 aa6.28□□□□□ -1.4
HMGB1P27-201ENST00000431429 A6NJR5 290 aa6.27□□□□□ -1.41
HMGB1P27-201ENST00000431429 NBPF26B4DH59 902 aa6.27□□□□□ -1.41
HMGB1P27-201ENST00000431429 DNAJB2P25686 324 aa6.27□□□□□ -1.41
HMGB1P27-201ENST00000431429 DIXDC1Q155Q3 683 aa6.27□□□□□ -1.41
HMGB1P27-201ENST00000431429 PPP2R2DQ66LE6 453 aa6.27□□□□□ -1.41
HMGB1P27-201ENST00000431429 POTEEQ6S8J3 1075 aa6.27□□□□□ -1.41
HMGB1P27-201ENST00000431429 NUDT18Q6ZVK8 323 aa6.27□□□□□ -1.41
HMGB1P27-201ENST00000431429 TATDN2Q93075 761 aa6.27□□□□□ -1.41
HMGB1P27-201ENST00000431429 ZBED2Q9BTP6 218 aa6.27□□□□□ -1.41
HMGB1P27-201ENST00000431429 GJA5P36382 358 aa6.26□□□□□ -1.41
HMGB1P27-201ENST00000431429 CLK2P49760 499 aaKnown RBP6.26□□□□□ -1.41
HMGB1P27-201ENST00000431429 SPIRE2Q8WWL2 714 aa6.26□□□□□ -1.41
HMGB1P27-201ENST00000431429 SLC4A5Q9BY07 1137 aa6.26□□□□□ -1.41
HMGB1P27-201ENST00000431429 C1orf115Q9H7X2 142 aa6.26□□□□□ -1.41
HMGB1P27-201ENST00000431429 SPTLC1O15269 473 aa6.25□□□□□ -1.41
HMGB1P27-201ENST00000431429 PROX2Q3B8N5 592 aa6.25□□□□□ -1.41
HMGB1P27-201ENST00000431429 LIMD1Q9UGP4 676 aa6.25□□□□□ -1.41
HMGB1P27-201ENST00000431429 PACS2Q86VP3 889 aa6.24□□□□□ -1.41
HMGB1P27-201ENST00000431429 SULF1Q8IWU6 871 aa6.24□□□□□ -1.41
HMGB1P27-201ENST00000431429 POLR3EQ9NVU0 708 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms