RNA–Protein interactions for RNA: ENST00000429280.1

SKP1P3-201, Transcript of S-phase kinase associated protein 1 pseudogene 3, humanhuman

BASIC

Gene SKP1P3, Length 487 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P3-201ENST00000429280 FOSBP53539 338 aa8.68□□□□□ -1.02
SKP1P3-201ENST00000429280 AMHR2Q16671 573 aa8.68□□□□□ -1.02
SKP1P3-201ENST00000429280 ARSIQ5FYB1 569 aa8.68□□□□□ -1.02
SKP1P3-201ENST00000429280 NUDT7P0C024 238 aa8.67□□□□□ -1.02
SKP1P3-201ENST00000429280 TSR1Q2NL82 804 aaKnown RBP8.67□□□□□ -1.02
SKP1P3-201ENST00000429280 GPR153Q6NV75 609 aa8.67□□□□□ -1.02
SKP1P3-201ENST00000429280 KHSRPQ92945 711 aaKnown RBP eCLIP8.66□□□□□ -1.02
SKP1P3-201ENST00000429280 ZDHHC16Q969W1 377 aa8.66□□□□□ -1.02
SKP1P3-201ENST00000429280 ERICH6Q7L0X2 663 aa8.65□□□□□ -1.02
SKP1P3-201ENST00000429280 ZNF454Q8N9F8 522 aa8.65□□□□□ -1.02
SKP1P3-201ENST00000429280 IL27Q8NEV9 243 aa8.65□□□□□ -1.02
SKP1P3-201ENST00000429280 C6orf132Q5T0Z8 1188 aa8.64□□□□□ -1.03
SKP1P3-201ENST00000429280 ZNF710Q8N1W2 664 aa8.64□□□□□ -1.03
SKP1P3-201ENST00000429280 CERKQ8TCT0 537 aa8.64□□□□□ -1.03
SKP1P3-201ENST00000429280 TIMELESSQ9UNS1 1208 aa8.63□□□□□ -1.03
SKP1P3-201ENST00000429280 PARP9Q8IXQ6 854 aa8.62□□□□□ -1.03
SKP1P3-201ENST00000429280 SNPHO15079 494 aa8.6□□□□□ -1.03
SKP1P3-201ENST00000429280 TTLL12Q14166 644 aaPredicted RBP8.6□□□□□ -1.03
SKP1P3-201ENST00000429280 DDRGK1Q96HY6 314 aa8.6□□□□□ -1.03
SKP1P3-201ENST00000429280 ADAM33Q9BZ11 813 aa8.6□□□□□ -1.03
SKP1P3-201ENST00000429280 FAM117AQ9C073 453 aa8.6□□□□□ -1.03
SKP1P3-201ENST00000429280 LHX6Q9UPM6 363 aa8.6□□□□□ -1.03
SKP1P3-201ENST00000429280 PSDA5PKW4 1024 aaPredicted RBP8.58□□□□□ -1.04
SKP1P3-201ENST00000429280 RBM27Q9P2N5 1060 aaKnown RBP8.58□□□□□ -1.04
SKP1P3-201ENST00000429280 OATP04181 439 aa8.57□□□□□ -1.04
SKP1P3-201ENST00000429280 PPP4R3BQ5MIZ7 849 aa8.57□□□□□ -1.04
SKP1P3-201ENST00000429280 PADI6Q6TGC4 694 aa8.57□□□□□ -1.04
SKP1P3-201ENST00000429280 GIGYF2Q6Y7W6 1299 aaKnown RBP8.56□□□□□ -1.04
SKP1P3-201ENST00000429280 TTC13Q8NBP0 860 aa8.56□□□□□ -1.04
SKP1P3-201ENST00000429280 TMUB1Q9BVT8 246 aa8.56□□□□□ -1.04
SKP1P3-201ENST00000429280 REPIN1Q9BWE0 567 aaKnown RBP8.56□□□□□ -1.04
SKP1P3-201ENST00000429280 PLEKHG3A1L390 1219 aa8.55□□□□□ -1.04
SKP1P3-201ENST00000429280 HOXB1P14653 301 aaPredicted RBP8.55□□□□□ -1.04
SKP1P3-201ENST00000429280 CLCN1P35523 988 aa8.55□□□□□ -1.04
SKP1P3-201ENST00000429280 PRSS12P56730 875 aa8.55□□□□□ -1.04
SKP1P3-201ENST00000429280 PHOX2BQ99453 314 aa8.55□□□□□ -1.04
SKP1P3-201ENST00000429280 BCL2L12Q9HB09 334 aa8.55□□□□□ -1.04
SKP1P3-201ENST00000429280 FAM161AQ3B820 660 aa8.54□□□□□ -1.04
SKP1P3-201ENST00000429280 METTL3Q86U44 580 aaKnown RBP8.54□□□□□ -1.04
SKP1P3-201ENST00000429280 GPCPD1Q9NPB8 672 aa8.54□□□□□ -1.04
SKP1P3-201ENST00000429280 ADGRG1Q9Y653 693 aa8.54□□□□□ -1.04
SKP1P3-201ENST00000429280 MS4A1P11836 297 aa8.53□□□□□ -1.04
SKP1P3-201ENST00000429280 MDM2Q00987 491 aaPredicted RBP8.53□□□□□ -1.04
SKP1P3-201ENST00000429280 C14orf37Q86TY3 774 aa8.53□□□□□ -1.04
SKP1P3-201ENST00000429280 PXYLP1Q8TE99 480 aa8.53□□□□□ -1.04
SKP1P3-201ENST00000429280 CDCA7LQ96GN5 454 aa8.53□□□□□ -1.04
SKP1P3-201ENST00000429280 OTUD5Q96G74 571 aa8.52□□□□□ -1.05
SKP1P3-201ENST00000429280 COL9A1P20849 921 aa8.51□□□□□ -1.05
SKP1P3-201ENST00000429280 PTPREP23469 700 aa8.51□□□□□ -1.05
SKP1P3-201ENST00000429280 PPP1R3GB7ZBB8 358 aa8.5□□□□□ -1.05
SKP1P3-201ENST00000429280 SSTR3P32745 418 aaPredicted RBP8.5□□□□□ -1.05
SKP1P3-201ENST00000429280 RBM46Q8TBY0 533 aaKnown RBP8.5□□□□□ -1.05
SKP1P3-201ENST00000429280 GOPCQ9HD26 462 aa8.5□□□□□ -1.05
SKP1P3-201ENST00000429280 FAM198AQ9UFP1 575 aa8.48□□□□□ -1.05
SKP1P3-201ENST00000429280 NLRP7Q8WX94 980 aa8.47□□□□□ -1.05
SKP1P3-201ENST00000429280 FAM217BQ9NTX9 383 aaPredicted RBP8.47□□□□□ -1.05
SKP1P3-201ENST00000429280 TSKSQ9UJT2 592 aa8.47□□□□□ -1.05
SKP1P3-201ENST00000429280 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.45□□□□□ -1.06
SKP1P3-201ENST00000429280 LHX8Q68G74 356 aa8.45□□□□□ -1.06
SKP1P3-201ENST00000429280 EYA1Q99502 592 aa8.45□□□□□ -1.06
SKP1P3-201ENST00000429280 BEGAINQ9BUH8 593 aa8.45□□□□□ -1.06
SKP1P3-201ENST00000429280 TRIM6-TRIM34B2RNG4 842 aa8.44□□□□□ -1.06
SKP1P3-201ENST00000429280 ONECUT3O60422 494 aaPredicted RBP8.44□□□□□ -1.06
SKP1P3-201ENST00000429280 PACS2Q86VP3 889 aa8.44□□□□□ -1.06
SKP1P3-201ENST00000429280 RSPH6AQ9H0K4 717 aa8.44□□□□□ -1.06
SKP1P3-201ENST00000429280 RCCD1A6NED2 376 aa8.43□□□□□ -1.06
SKP1P3-201ENST00000429280 NUDT18Q6ZVK8 323 aa8.43□□□□□ -1.06
SKP1P3-201ENST00000429280 KCNH8Q96L42 1107 aa8.43□□□□□ -1.06
SKP1P3-201ENST00000429280 NBPF26B4DH59 902 aa8.42□□□□□ -1.06
SKP1P3-201ENST00000429280 SH3D19Q5HYK7 790 aa8.42□□□□□ -1.06
SKP1P3-201ENST00000429280 TATDN2Q93075 761 aa8.42□□□□□ -1.06
SKP1P3-201ENST00000429280 PCMTD1Q96MG8 357 aaPredicted RBP8.42□□□□□ -1.06
SKP1P3-201ENST00000429280 KCNK17Q96T54 332 aa8.42□□□□□ -1.06
SKP1P3-201ENST00000429280 PNMA3Q9UL41 463 aa8.42□□□□□ -1.06
SKP1P3-201ENST00000429280 C3orf80F5H4A9 247 aa8.41□□□□□ -1.06
SKP1P3-201ENST00000429280 SKIV2LQ15477 1246 aaKnown RBP8.41□□□□□ -1.06
SKP1P3-201ENST00000429280 ERBB3P21860 1342 aa8.4□□□□□ -1.06
SKP1P3-201ENST00000429280 DNAJB2P25686 324 aa8.4□□□□□ -1.06
SKP1P3-201ENST00000429280 PROX2Q3B8N5 592 aa8.4□□□□□ -1.06
SKP1P3-201ENST00000429280 ZBED2Q9BTP6 218 aa8.39□□□□□ -1.07
SKP1P3-201ENST00000429280 DIXDC1Q155Q3 683 aa8.38□□□□□ -1.07
SKP1P3-201ENST00000429280 ARHGAP33O14559 1287 aa8.37□□□□□ -1.07
SKP1P3-201ENST00000429280 ST18O60284 1047 aa8.37□□□□□ -1.07
SKP1P3-201ENST00000429280 PSEN2P49810 448 aa8.37□□□□□ -1.07
SKP1P3-201ENST00000429280 VARS2Q5ST30 1063 aaKnown RBP8.37□□□□□ -1.07
SKP1P3-201ENST00000429280 SULF1Q8IWU6 871 aa8.37□□□□□ -1.07
SKP1P3-201ENST00000429280 TMEM134Q9H6X4 195 aa8.37□□□□□ -1.07
SKP1P3-201ENST00000429280 KIAA1468Q9P260 1216 aa8.37□□□□□ -1.07
SKP1P3-201ENST00000429280 SMAPO00193 183 aa8.36□□□□□ -1.07
SKP1P3-201ENST00000429280 MYSM1Q5VVJ2 828 aa8.36□□□□□ -1.07
SKP1P3-201ENST00000429280 SLC4A5Q9BY07 1137 aa8.36□□□□□ -1.07
SKP1P3-201ENST00000429280 CD46P15529 392 aa8.35□□□□□ -1.07
SKP1P3-201ENST00000429280 POTEEQ6S8J3 1075 aa8.35□□□□□ -1.07
SKP1P3-201ENST00000429280 TBC1D2Q9BYX2 928 aa8.35□□□□□ -1.07
SKP1P3-201ENST00000429280 POLR3EQ9NVU0 708 aa8.35□□□□□ -1.07
SKP1P3-201ENST00000429280 DDX11L8A8MPP1 907 aa8.34□□□□□ -1.07
SKP1P3-201ENST00000429280 EMP3P54852 163 aa8.34□□□□□ -1.07
SKP1P3-201ENST00000429280 FLIIQ13045 1269 aa8.34□□□□□ -1.07
SKP1P3-201ENST00000429280 PROCA1Q8NCQ7 364 aaPredicted RBP8.34□□□□□ -1.07
SKP1P3-201ENST00000429280 ZMYND15Q9H091 742 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms