RNA–Protein interactions for RNA: ENST00000429136.5

ATP13A3-202, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,729 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-202ENST00000429136 NUDCQ9Y266 331 aa7.2□□□□□ -1.26
ATP13A3-202ENST00000429136 ADCY10Q96PN6 1610 aa7.2□□□□□ -1.26
ATP13A3-202ENST00000429136 SALL2Q9Y467 1007 aaPredicted RBP7.19□□□□□ -1.26
ATP13A3-202ENST00000429136 RALGAPBQ86X10 1494 aa7.19□□□□□ -1.26
ATP13A3-202ENST00000429136 ARHGEF12Q9NZN5 1544 aa7.19□□□□□ -1.26
ATP13A3-202ENST00000429136 EIF3AQ14152 1382 aaKnown RBP7.19□□□□□ -1.26
ATP13A3-202ENST00000429136 CC2D1BQ5T0F9 858 aaKnown RBP7.18□□□□□ -1.26
ATP13A3-202ENST00000429136 ARHGEF5Q12774 1597 aa7.18□□□□□ -1.26
ATP13A3-202ENST00000429136 DENND4BO75064 1496 aaPredicted RBP7.18□□□□□ -1.26
ATP13A3-202ENST00000429136 ABCC2Q92887 1545 aa7.18□□□□□ -1.26
ATP13A3-202ENST00000429136 BRD4O60885 1362 aaPredicted RBP7.18□□□□□ -1.26
ATP13A3-202ENST00000429136 UHRF1BP1Q6BDS2 1440 aa7.17□□□□□ -1.26
ATP13A3-202ENST00000429136 SYCP2Q9BX26 1530 aa7.17□□□□□ -1.26
ATP13A3-202ENST00000429136 PLCH2O75038 1416 aa7.17□□□□□ -1.26
ATP13A3-202ENST00000429136 CCDC184Q52MB2 194 aa7.17□□□□□ -1.26
ATP13A3-202ENST00000429136 PDE3BQ13370 1112 aa7.16□□□□□ -1.26
ATP13A3-202ENST00000429136 AFAP1Q8N556 730 aa7.16□□□□□ -1.26
ATP13A3-202ENST00000429136 FAM135AQ9P2D6 1515 aa7.16□□□□□ -1.26
ATP13A3-202ENST00000429136 WASHC2CQ9Y4E1 1318 aa7.16□□□□□ -1.26
ATP13A3-202ENST00000429136 DUOX2Q9NRD8 1548 aa7.16□□□□□ -1.26
ATP13A3-202ENST00000429136 B4GALNT3Q6L9W6 998 aa7.16□□□□□ -1.26
ATP13A3-202ENST00000429136 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.16□□□□□ -1.26
ATP13A3-202ENST00000429136 MBD5Q9P267 1494 aa7.16□□□□□ -1.26
ATP13A3-202ENST00000429136 KDM5BQ9UGL1 1544 aa7.16□□□□□ -1.26
ATP13A3-202ENST00000429136 SPATA31E1Q6ZUB1 1445 aa7.15□□□□□ -1.26
ATP13A3-202ENST00000429136 ERBINQ96RT1 1412 aa7.15□□□□□ -1.26
ATP13A3-202ENST00000429136 RBM19Q9Y4C8 960 aaKnown RBP7.15□□□□□ -1.26
ATP13A3-202ENST00000429136 PANK3Q9H999 370 aa7.15□□□□□ -1.26
ATP13A3-202ENST00000429136 ANP32AP39687 249 aaKnown RBP7.15□□□□□ -1.27
ATP13A3-202ENST00000429136 NBPF1Q3BBV0 1214 aa7.15□□□□□ -1.27
ATP13A3-202ENST00000429136 OSCARQ8IYS5 282 aa7.15□□□□□ -1.27
ATP13A3-202ENST00000429136 SENP3-EIF4A1A0A087X0R7 540 aa7.14□□□□□ -1.27
ATP13A3-202ENST00000429136 KDM5DQ9BY66 1539 aa7.14□□□□□ -1.27
ATP13A3-202ENST00000429136 PNISRQ8TF01 805 aaKnown RBP7.14□□□□□ -1.27
ATP13A3-202ENST00000429136 GGT6Q6P531 493 aa7.13□□□□□ -1.27
ATP13A3-202ENST00000429136 CDC42BPAQ5VT25 1732 aa7.13□□□□□ -1.27
ATP13A3-202ENST00000429136 PRAG1Q86YV5 1406 aa7.13□□□□□ -1.27
ATP13A3-202ENST00000429136 RCAN3Q9UKA8 241 aa7.13□□□□□ -1.27
ATP13A3-202ENST00000429136 CROCC2H7BZ55 1655 aa7.13□□□□□ -1.27
ATP13A3-202ENST00000429136 PREX2Q70Z35 1606 aa7.12□□□□□ -1.27
ATP13A3-202ENST00000429136 SMG6Q86US8 1419 aaKnown RBP7.12□□□□□ -1.27
ATP13A3-202ENST00000429136 SCAPERQ9BY12 1400 aa7.12□□□□□ -1.27
ATP13A3-202ENST00000429136 ANP32EQ9BTT0 268 aa7.12□□□□□ -1.27
ATP13A3-202ENST00000429136 STAG3Q9UJ98 1225 aa7.12□□□□□ -1.27
ATP13A3-202ENST00000429136 SAMD9LQ8IVG5 1584 aa7.12□□□□□ -1.27
ATP13A3-202ENST00000429136 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.12□□□□□ -1.27
ATP13A3-202ENST00000429136 DAXXQ9UER7 740 aaPredicted RBP7.12□□□□□ -1.27
ATP13A3-202ENST00000429136 UHRF1BP1LA0JNW5 1464 aa7.11□□□□□ -1.27
ATP13A3-202ENST00000429136 CANXP27824 592 aaKnown RBP7.11□□□□□ -1.27
ATP13A3-202ENST00000429136 RTEL1-TNFRSF6BF6WH68 1400 aa7.11□□□□□ -1.27
ATP13A3-202ENST00000429136 DHX29Q7Z478 1369 aaKnown RBP7.11□□□□□ -1.27
ATP13A3-202ENST00000429136 CHD1O14646 1710 aa7.1□□□□□ -1.27
ATP13A3-202ENST00000429136 FANCAO15360 1455 aa7.1□□□□□ -1.27
ATP13A3-202ENST00000429136 CFAP53Q96M91 514 aa7.1□□□□□ -1.27
ATP13A3-202ENST00000429136 TRAPPC8Q9Y2L5 1435 aa7.1□□□□□ -1.27
ATP13A3-202ENST00000429136 ADGRL1O94910 1474 aa7.1□□□□□ -1.27
ATP13A3-202ENST00000429136 EIF2AK4Q9P2K8 1649 aaKnown RBP7.1□□□□□ -1.27
ATP13A3-202ENST00000429136 WDR7Q9Y4E6 1490 aa7.1□□□□□ -1.27
ATP13A3-202ENST00000429136 ESF1Q9H501 851 aaKnown RBP7.09□□□□□ -1.27
ATP13A3-202ENST00000429136 MYO5CQ9NQX4 1742 aa7.09□□□□□ -1.27
ATP13A3-202ENST00000429136 MAST1Q9Y2H9 1570 aa7.09□□□□□ -1.27
ATP13A3-202ENST00000429136 RTL5Q5HYW3 569 aaPredicted RBP7.09□□□□□ -1.28
ATP13A3-202ENST00000429136 TTC37Q6PGP7 1564 aa7.09□□□□□ -1.28
ATP13A3-202ENST00000429136 GPRASP1Q5JY77 1395 aa7.08□□□□□ -1.28
ATP13A3-202ENST00000429136 NEFMP07197 916 aa7.08□□□□□ -1.28
ATP13A3-202ENST00000429136 A2MP01023 1474 aa7.08□□□□□ -1.28
ATP13A3-202ENST00000429136 KDM5CP41229 1560 aa7.08□□□□□ -1.28
ATP13A3-202ENST00000429136 RRP1P56182 461 aaKnown RBP7.08□□□□□ -1.28
ATP13A3-202ENST00000429136 MORC1Q86VD1 984 aa7.07□□□□□ -1.28
ATP13A3-202ENST00000429136 PLXNC1O60486 1568 aa7.07□□□□□ -1.28
ATP13A3-202ENST00000429136 SCAF11Q99590 1463 aaKnown RBP7.07□□□□□ -1.28
ATP13A3-202ENST00000429136 VGFO15240 615 aaPredicted RBP7.06□□□□□ -1.28
ATP13A3-202ENST00000429136 GOLGA2Q08379 1002 aa7.06□□□□□ -1.28
ATP13A3-202ENST00000429136 CFAP70Q5T0N1 1121 aa7.06□□□□□ -1.28
ATP13A3-202ENST00000429136 CENPJQ9HC77 1338 aaPredicted RBP7.06□□□□□ -1.28
ATP13A3-202ENST00000429136 ASXL2Q76L83 1435 aa7.06□□□□□ -1.28
ATP13A3-202ENST00000429136 FANCIQ9NVI1 1328 aa7.06□□□□□ -1.28
ATP13A3-202ENST00000429136 NGEFQ8N5V2 710 aa7.06□□□□□ -1.28
ATP13A3-202ENST00000429136 ABCC1P33527 1531 aa7.06□□□□□ -1.28
ATP13A3-202ENST00000429136 COL17A1Q9UMD9 1497 aaPredicted RBP7.06□□□□□ -1.28
ATP13A3-202ENST00000429136 PARD3Q8TEW0 1356 aa7.06□□□□□ -1.28
ATP13A3-202ENST00000429136 DISP3Q9P2K9 1392 aa7.06□□□□□ -1.28
ATP13A3-202ENST00000429136 TESK2Q96S53 571 aa7.05□□□□□ -1.28
ATP13A3-202ENST00000429136 ZBTB47Q9UFB7 747 aaPredicted RBP7.05□□□□□ -1.28
ATP13A3-202ENST00000429136 TRAK1Q9UPV9 953 aa7.05□□□□□ -1.28
ATP13A3-202ENST00000429136 CD109Q6YHK3 1445 aa7.05□□□□□ -1.28
ATP13A3-202ENST00000429136 NPM2Q86SE8 214 aaKnown RBP7.05□□□□□ -1.28
ATP13A3-202ENST00000429136 POGKQ9P215 609 aa7.05□□□□□ -1.28
ATP13A3-202ENST00000429136 SHROOM2Q13796 1616 aa7.05□□□□□ -1.28
ATP13A3-202ENST00000429136 UNC13BO14795 1591 aa7.05□□□□□ -1.28
ATP13A3-202ENST00000429136 TCERG1O14776 1098 aaKnown RBP7.05□□□□□ -1.28
ATP13A3-202ENST00000429136 PPP2R1AP30153 589 aa7.05□□□□□ -1.28
ATP13A3-202ENST00000429136 ERCC6L2Q5T890 1561 aa7.05□□□□□ -1.28
ATP13A3-202ENST00000429136 CDC42BPBQ9Y5S2 1711 aa7.05□□□□□ -1.28
ATP13A3-202ENST00000429136 RPGRIP1LQ68CZ1 1315 aa7.05□□□□□ -1.28
ATP13A3-202ENST00000429136 ZCCHC11Q5TAX3 1644 aaKnown RBP7.04□□□□□ -1.28
ATP13A3-202ENST00000429136 ARAP3Q8WWN8 1544 aa7.04□□□□□ -1.28
ATP13A3-202ENST00000429136 ATP10AO60312 1499 aa7.04□□□□□ -1.28
ATP13A3-202ENST00000429136 ATP7AQ04656 1500 aa7.04□□□□□ -1.28
ATP13A3-202ENST00000429136 IQGAP3Q86VI3 1631 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms