RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 UBE2Q2Q8WVN8 375 aa21.49■■□□□ 1.03
PKP4-205ENST00000426248 ADGRL1O94910 1474 aa21.47■■□□□ 1.03
PKP4-205ENST00000426248 HSPA5P11021 654 aaKnown RBP21.47■■□□□ 1.03
PKP4-205ENST00000426248 LRRIQ1Q96JM4 1722 aa21.46■■□□□ 1.03
PKP4-205ENST00000426248 CLASP1Q7Z460 1538 aa21.46■■□□□ 1.03
PKP4-205ENST00000426248 SYCP2Q9BX26 1530 aa21.45■■□□□ 1.03
PKP4-205ENST00000426248 PPP4R2Q9NY27 417 aa21.44■■□□□ 1.02
PKP4-205ENST00000426248 TRAPPC8Q9Y2L5 1435 aa21.44■■□□□ 1.02
PKP4-205ENST00000426248 NEFMP07197 916 aa21.43■■□□□ 1.02
PKP4-205ENST00000426248 ITSN2Q9NZM3 1697 aa21.43■■□□□ 1.02
PKP4-205ENST00000426248 CCDC144AA2RUR9 1427 aa21.42■■□□□ 1.02
PKP4-205ENST00000426248 ABCC10Q5T3U5 1492 aa21.42■■□□□ 1.02
PKP4-205ENST00000426248 NUTM2DQ5VT03 806 aaPredicted RBP21.42■■□□□ 1.02
PKP4-205ENST00000426248 KDM5BQ9UGL1 1544 aa21.41■■□□□ 1.02
PKP4-205ENST00000426248 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.38■■□□□ 1.014e-10■■■■■ 30.3
PKP4-205ENST00000426248 UHRF1BP1LA0JNW5 1464 aa21.37■■□□□ 1.01
PKP4-205ENST00000426248 KIAA1107Q9UPP5 1409 aa21.35■■□□□ 1.01
PKP4-205ENST00000426248 MAPKBP1O60336 1514 aa21.34■■□□□ 1.01
PKP4-205ENST00000426248 FAM9BQ8IZU0 186 aa21.34■■□□□ 1.01
PKP4-205ENST00000426248 PKNOX2Q96KN3 472 aa21.33■■□□□ 1.01
PKP4-205ENST00000426248 DAXXQ9UER7 740 aaPredicted RBP21.33■■□□□ 1.01
PKP4-205ENST00000426248 ZCCHC11Q5TAX3 1644 aaKnown RBP21.33■■□□□ 1.01
PKP4-205ENST00000426248 NBPF8Q3BBV2 869 aa21.31■■□□□ 1
PKP4-205ENST00000426248 DNMT1P26358 1616 aaKnown RBP21.31■■□□□ 1
PKP4-205ENST00000426248 TTC37Q6PGP7 1564 aa21.31■■□□□ 1
PKP4-205ENST00000426248 ANKRD30BQ9BXX2 1392 aa21.31■■□□□ 1
PKP4-205ENST00000426248 SHROOM2Q13796 1616 aa21.31■■□□□ 1
PKP4-205ENST00000426248 ROCK2O75116 1388 aaKnown RBP21.3■■□□□ 1
PKP4-205ENST00000426248 GLIPR1L2Q4G1C9 344 aa21.29■■□□□ 1
PKP4-205ENST00000426248 IPO9Q96P70 1041 aaKnown RBP21.29■■□□□ 1
PKP4-205ENST00000426248 MBD5Q9P267 1494 aa21.27■■□□□ 1
PKP4-205ENST00000426248 CCER2I3L3R5 266 aa21.26■□□□□ 0.99
PKP4-205ENST00000426248 BRPF3Q9ULD4 1205 aa21.24■□□□□ 0.99
PKP4-205ENST00000426248 DENND4BO75064 1496 aaPredicted RBP21.24■□□□□ 0.99
PKP4-205ENST00000426248 SAFB2Q14151 953 aaKnown RBP eCLIP21.23■□□□□ 0.99
PKP4-205ENST00000426248 ST20-MTHFSA0A0A6YYL1 179 aa21.23■□□□□ 0.99
PKP4-205ENST00000426248 ADCY10Q96PN6 1610 aa21.23■□□□□ 0.99
PKP4-205ENST00000426248 KDM6BO15054 1643 aa21.22■□□□□ 0.99
PKP4-205ENST00000426248 STK26Q9P289 416 aa21.21■□□□□ 0.99
PKP4-205ENST00000426248 SAMD9LQ8IVG5 1584 aa21.21■□□□□ 0.99
PKP4-205ENST00000426248 DHX29Q7Z478 1369 aaKnown RBP21.19■□□□□ 0.98
PKP4-205ENST00000426248 CDC42BPAQ5VT25 1732 aa21.19■□□□□ 0.98
PKP4-205ENST00000426248 NBPF1Q3BBV0 1214 aa21.18■□□□□ 0.98
PKP4-205ENST00000426248 TMC1Q8TDI8 760 aa21.18■□□□□ 0.98
PKP4-205ENST00000426248 SHANK2Q9UPX8 1470 aa21.17■□□□□ 0.98
PKP4-205ENST00000426248 MYO5CQ9NQX4 1742 aa21.17■□□□□ 0.98
PKP4-205ENST00000426248 ARHGEF12Q9NZN5 1544 aa21.16■□□□□ 0.98
PKP4-205ENST00000426248 ADGRL2O95490 1459 aa21.15■□□□□ 0.98
PKP4-205ENST00000426248 ZNF518AQ6AHZ1 1483 aa21.15■□□□□ 0.98
PKP4-205ENST00000426248 USP47Q96K76 1375 aa21.14■□□□□ 0.98
PKP4-205ENST00000426248 VSIG10Q8N0Z9 540 aa21.14■□□□□ 0.98
PKP4-205ENST00000426248 MRS2Q9HD23 443 aa21.14■□□□□ 0.98
PKP4-205ENST00000426248 PZPP20742 1482 aa21.13■□□□□ 0.97
PKP4-205ENST00000426248 PREX2Q70Z35 1606 aa21.13■□□□□ 0.97
PKP4-205ENST00000426248 TRAK1Q9UPV9 953 aa21.12■□□□□ 0.97
PKP4-205ENST00000426248 DUOX2Q9NRD8 1548 aa21.12■□□□□ 0.97
PKP4-205ENST00000426248 ARXQ96QS3 562 aa21.11■□□□□ 0.97
PKP4-205ENST00000426248 TMF1P82094 1093 aa21.11■□□□□ 0.97
PKP4-205ENST00000426248 RPRD2Q5VT52 1461 aaKnown RBP21.1■□□□□ 0.97
PKP4-205ENST00000426248 POGKQ9P215 609 aa21.1■□□□□ 0.97
PKP4-205ENST00000426248 FBXO31Q5XUX0 539 aaPredicted RBP21.09■□□□□ 0.97
PKP4-205ENST00000426248 A2MP01023 1474 aa21.09■□□□□ 0.97
PKP4-205ENST00000426248 CFAP70Q5T0N1 1121 aa21.09■□□□□ 0.97
PKP4-205ENST00000426248 FAM135AQ9P2D6 1515 aa21.07■□□□□ 0.96
PKP4-205ENST00000426248 ERBINQ96RT1 1412 aa21.07■□□□□ 0.96
PKP4-205ENST00000426248 TMEM132EQ6IEE7 984 aa21.06■□□□□ 0.96
PKP4-205ENST00000426248 ARHGEF5Q12774 1597 aa21.06■□□□□ 0.96
PKP4-205ENST00000426248 CDC42BPBQ9Y5S2 1711 aa21.06■□□□□ 0.96
PKP4-205ENST00000426248 RTEL1-TNFRSF6BF6WH68 1400 aa21.05■□□□□ 0.96
PKP4-205ENST00000426248 PPM1GO15355 546 aaPredicted RBP21.05■□□□□ 0.96
PKP4-205ENST00000426248 CC2D1BQ5T0F9 858 aaKnown RBP21.05■□□□□ 0.96
PKP4-205ENST00000426248 WASHC2AQ641Q2 1341 aa21.04■□□□□ 0.96
PKP4-205ENST00000426248 ATP7AQ04656 1500 aa21.04■□□□□ 0.96
PKP4-205ENST00000426248 ABCC1P33527 1531 aa21.04■□□□□ 0.96
PKP4-205ENST00000426248 GCC2Q8IWJ2 1684 aa21.03■□□□□ 0.96
PKP4-205ENST00000426248 VGFO15240 615 aaPredicted RBP21.03■□□□□ 0.96
PKP4-205ENST00000426248 RIMBP3CA6NJZ7 1639 aa21.02■□□□□ 0.96
PKP4-205ENST00000426248 RIMBP3BA6NNM3 1639 aa21.02■□□□□ 0.96
PKP4-205ENST00000426248 RIMBP3Q9UFD9 1639 aa21.02■□□□□ 0.96
PKP4-205ENST00000426248 CDCA8Q53HL2 280 aa21.02■□□□□ 0.96
PKP4-205ENST00000426248 POGZQ7Z3K3 1410 aa21■□□□□ 0.95
PKP4-205ENST00000426248 KIF7Q2M1P5 1343 aa21■□□□□ 0.95
PKP4-205ENST00000426248 KNSTRNQ9Y448 316 aa21■□□□□ 0.95
PKP4-205ENST00000426248 TEX14Q8IWB6 1497 aa20.99■□□□□ 0.95
PKP4-205ENST00000426248 IDI1Q13907 227 aa20.99■□□□□ 0.95
PKP4-205ENST00000426248 TSPOAP1O95153 1857 aa20.98■□□□□ 0.95
PKP4-205ENST00000426248 C11orf95C9JLR9 678 aaPredicted RBP20.98■□□□□ 0.95
PKP4-205ENST00000426248 CEBPAP49715 358 aaPredicted RBP20.98■□□□□ 0.95
PKP4-205ENST00000426248 YEATS2Q9ULM3 1422 aa20.98■□□□□ 0.95
PKP4-205ENST00000426248 ADGBQ8N7X0 1667 aa20.98■□□□□ 0.95
PKP4-205ENST00000426248 SRPK2P78362 688 aaKnown RBP20.97■□□□□ 0.95
PKP4-205ENST00000426248 GSE1Q14687 1217 aa20.97■□□□□ 0.95
PKP4-205ENST00000426248 HDGFP51858 240 aaKnown RBP20.97■□□□□ 0.95
PKP4-205ENST00000426248 RSPH6AQ9H0K4 717 aa20.96■□□□□ 0.95
PKP4-205ENST00000426248 NAP1L5Q96NT1 182 aaPredicted RBP20.96■□□□□ 0.95
PKP4-205ENST00000426248 NEO1Q92859 1461 aa20.95■□□□□ 0.94
PKP4-205ENST00000426248 TNNT2P45379 298 aaPredicted RBP20.95■□□□□ 0.94
PKP4-205ENST00000426248 CCDC7Q96M83 1385 aa20.94■□□□□ 0.94
PKP4-205ENST00000426248 SLC52A1Q9NWF4 448 aa20.94■□□□□ 0.94
PKP4-205ENST00000426248 PODXL2Q9NZ53 605 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms