RNA–Protein interactions for RNA: ENST00000424463.4

VPS8-204, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS8, Length 2,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-204ENST00000424463 OSCARQ8IYS5 282 aa11.68□□□□□ -0.54
VPS8-204ENST00000424463 C9orf84Q5VXU9 1444 aa11.67□□□□□ -0.54
VPS8-204ENST00000424463 ZFP91Q96JP5 570 aaPredicted RBP11.67□□□□□ -0.54
VPS8-204ENST00000424463 MBD5Q9P267 1494 aa11.67□□□□□ -0.54
VPS8-204ENST00000424463 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.67□□□□□ -0.54
VPS8-204ENST00000424463 ADGRL2O95490 1459 aa11.67□□□□□ -0.54
VPS8-204ENST00000424463 TTC37Q6PGP7 1564 aa11.66□□□□□ -0.54
VPS8-204ENST00000424463 UHRF1BP1LA0JNW5 1464 aa11.66□□□□□ -0.54
VPS8-204ENST00000424463 IPO4Q8TEX9 1081 aaKnown RBP11.65□□□□□ -0.54
VPS8-204ENST00000424463 ANKRD30BQ9BXX2 1392 aa11.65□□□□□ -0.54
VPS8-204ENST00000424463 MSH5O43196 834 aa11.65□□□□□ -0.54
VPS8-204ENST00000424463 ANKRD50Q9ULJ7 1429 aa11.65□□□□□ -0.54
VPS8-204ENST00000424463 KDM5BQ9UGL1 1544 aa11.65□□□□□ -0.54
VPS8-204ENST00000424463 SAMD9LQ8IVG5 1584 aa11.65□□□□□ -0.54
VPS8-204ENST00000424463 CDC42BPBQ9Y5S2 1711 aa11.65□□□□□ -0.55
VPS8-204ENST00000424463 L3MBTL2Q969R5 705 aa11.64□□□□□ -0.55
VPS8-204ENST00000424463 YTHDC1Q96MU7 727 aaKnown RBP11.64□□□□□ -0.55
VPS8-204ENST00000424463 ZCCHC11Q5TAX3 1644 aaKnown RBP11.64□□□□□ -0.55
VPS8-204ENST00000424463 PZPP20742 1482 aa11.64□□□□□ -0.55
VPS8-204ENST00000424463 ARHGAP5Q13017 1502 aa11.64□□□□□ -0.55
VPS8-204ENST00000424463 CROCC2H7BZ55 1655 aa11.64□□□□□ -0.55
VPS8-204ENST00000424463 PKD2Q13563 968 aa11.63□□□□□ -0.55
VPS8-204ENST00000424463 TEX2Q8IWB9 1127 aa11.63□□□□□ -0.55
VPS8-204ENST00000424463 PREX2Q70Z35 1606 aa11.63□□□□□ -0.55
VPS8-204ENST00000424463 KIF15Q9NS87 1388 aa11.62□□□□□ -0.55
VPS8-204ENST00000424463 CHMP4BQ9H444 224 aaKnown RBP11.62□□□□□ -0.55
VPS8-204ENST00000424463 ADGBQ8N7X0 1667 aa11.62□□□□□ -0.55
VPS8-204ENST00000424463 DDX10Q13206 875 aaKnown RBP11.62□□□□□ -0.55
VPS8-204ENST00000424463 SHANK2Q9UPX8 1470 aa11.62□□□□□ -0.55
VPS8-204ENST00000424463 NUP155O75694 1391 aa11.61□□□□□ -0.55
VPS8-204ENST00000424463 SYCP2Q9BX26 1530 aa11.61□□□□□ -0.55
VPS8-204ENST00000424463 CCDC141Q6ZP82 1450 aa11.61□□□□□ -0.55
VPS8-204ENST00000424463 EFCAB2Q5VUJ9 269 aa11.6□□□□□ -0.55
VPS8-204ENST00000424463 PLCH2O75038 1416 aa11.6□□□□□ -0.55
VPS8-204ENST00000424463 ARHGEF5Q12774 1597 aa11.6□□□□□ -0.55
VPS8-204ENST00000424463 ARHGEF12Q9NZN5 1544 aa11.59□□□□□ -0.55
VPS8-204ENST00000424463 SECISBP2LQ93073 1101 aaKnown RBP11.59□□□□□ -0.55
VPS8-204ENST00000424463 SUPT16HQ9Y5B9 1047 aaKnown RBP11.59□□□□□ -0.55
VPS8-204ENST00000424463 NBPF8Q3BBV2 869 aa11.58□□□□□ -0.56
VPS8-204ENST00000424463 CFAP44Q96MT7 982 aa11.57□□□□□ -0.56
VPS8-204ENST00000424463 BRPF3Q9ULD4 1205 aa11.57□□□□□ -0.56
VPS8-204ENST00000424463 RPRD2Q5VT52 1461 aaKnown RBP11.57□□□□□ -0.56
VPS8-204ENST00000424463 KIAA1107Q9UPP5 1409 aa11.57□□□□□ -0.56
VPS8-204ENST00000424463 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.57□□□□□ -0.56
VPS8-204ENST00000424463 GTF2E1P29083 439 aaPredicted RBP11.56□□□□□ -0.56
VPS8-204ENST00000424463 AFAP1Q8N556 730 aa11.56□□□□□ -0.56
VPS8-204ENST00000424463 CCDC9Q9Y3X0 531 aaKnown RBP11.56□□□□□ -0.56
VPS8-204ENST00000424463 MYO5CQ9NQX4 1742 aa11.56□□□□□ -0.56
VPS8-204ENST00000424463 POLR3GLQ9BT43 218 aa11.56□□□□□ -0.56
VPS8-204ENST00000424463 HSPA5P11021 654 aaKnown RBP11.55□□□□□ -0.56
VPS8-204ENST00000424463 TRAPPC8Q9Y2L5 1435 aa11.55□□□□□ -0.56
VPS8-204ENST00000424463 WDR7Q9Y4E6 1490 aa11.55□□□□□ -0.56
VPS8-204ENST00000424463 BBXQ8WY36 941 aaPredicted RBP11.55□□□□□ -0.56
VPS8-204ENST00000424463 RNF216Q9NWF9 866 aaPredicted RBP11.55□□□□□ -0.56
VPS8-204ENST00000424463 ASXL2Q76L83 1435 aa11.54□□□□□ -0.56
VPS8-204ENST00000424463 TICAM2Q86XR7 235 aa11.54□□□□□ -0.56
VPS8-204ENST00000424463 PLEKHH2Q8IVE3 1493 aa11.54□□□□□ -0.56
VPS8-204ENST00000424463 NPM1P06748 294 aaKnown RBP eCLIP11.53□□□□□ -0.56
VPS8-204ENST00000424463 HMGB1P09429 215 aaKnown RBP11.53□□□□□ -0.56
VPS8-204ENST00000424463 CNPY4Q8N129 248 aa11.53□□□□□ -0.56
VPS8-204ENST00000424463 RBM19Q9Y4C8 960 aaKnown RBP11.53□□□□□ -0.56
VPS8-204ENST00000424463 TEX14Q8IWB6 1497 aa11.52□□□□□ -0.56
VPS8-204ENST00000424463 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.51□□□□□ -0.57
VPS8-204ENST00000424463 EIF4G2P78344 907 aaKnown RBP eCLIP11.5□□□□□ -0.57
VPS8-204ENST00000424463 PUS7Q96PZ0 661 aaKnown RBP11.5□□□□□ -0.57
VPS8-204ENST00000424463 SPAG9O60271 1321 aaKnown RBP11.5□□□□□ -0.57
VPS8-204ENST00000424463 NCLP19338 710 aaKnown RBP11.5□□□□□ -0.57
VPS8-204ENST00000424463 FTSJ3Q8IY81 847 aaKnown RBP11.5□□□□□ -0.57
VPS8-204ENST00000424463 MAST1Q9Y2H9 1570 aa11.49□□□□□ -0.57
VPS8-204ENST00000424463 ABCC1P33527 1531 aa11.49□□□□□ -0.57
VPS8-204ENST00000424463 KCNG1Q9UIX4 513 aa11.49□□□□□ -0.57
VPS8-204ENST00000424463 KDM5DQ9BY66 1539 aa11.49□□□□□ -0.57
VPS8-204ENST00000424463 FANCAO15360 1455 aa11.49□□□□□ -0.57
VPS8-204ENST00000424463 C11orf95C9JLR9 678 aaPredicted RBP11.48□□□□□ -0.57
VPS8-204ENST00000424463 KDM2AQ9Y2K7 1162 aa11.48□□□□□ -0.57
VPS8-204ENST00000424463 FAM135AQ9P2D6 1515 aa11.48□□□□□ -0.57
VPS8-204ENST00000424463 WASHC2AQ641Q2 1341 aa11.47□□□□□ -0.57
VPS8-204ENST00000424463 PRDM10Q9NQV6 1147 aa11.47□□□□□ -0.57
VPS8-204ENST00000424463 FANCIQ9NVI1 1328 aa11.46□□□□□ -0.57
VPS8-204ENST00000424463 STAC3Q96MF2 364 aa11.46□□□□□ -0.57
VPS8-204ENST00000424463 SCAPERQ9BY12 1400 aa11.46□□□□□ -0.57
VPS8-204ENST00000424463 DUOX2Q9NRD8 1548 aa11.46□□□□□ -0.58
VPS8-204ENST00000424463 CYB5RLQ6IPT4 315 aa11.46□□□□□ -0.58
VPS8-204ENST00000424463 PLXNC1O60486 1568 aa11.46□□□□□ -0.58
VPS8-204ENST00000424463 RGL3Q3MIN7 710 aa11.45□□□□□ -0.58
VPS8-204ENST00000424463 TMED8Q6PL24 325 aaPredicted RBP11.45□□□□□ -0.58
VPS8-204ENST00000424463 DCAF11Q8TEB1 546 aa11.45□□□□□ -0.58
VPS8-204ENST00000424463 ABCA9Q8IUA7 1624 aa11.45□□□□□ -0.58
VPS8-204ENST00000424463 PHF23Q9BUL5 403 aaPredicted RBP11.45□□□□□ -0.58
VPS8-204ENST00000424463 ARAP3Q8WWN8 1544 aa11.45□□□□□ -0.58
VPS8-204ENST00000424463 PRDM4Q9UKN5 801 aa11.44□□□□□ -0.58
VPS8-204ENST00000424463 PLA2R1Q13018 1463 aa11.44□□□□□ -0.58
VPS8-204ENST00000424463 ZNF592Q92610 1267 aa11.43□□□□□ -0.58
VPS8-204ENST00000424463 ADGRL1O94910 1474 aa11.43□□□□□ -0.58
VPS8-204ENST00000424463 ERBINQ96RT1 1412 aa11.43□□□□□ -0.58
VPS8-204ENST00000424463 ANP32CO43423 234 aa11.42□□□□□ -0.58
VPS8-204ENST00000424463 RTEL1-TNFRSF6BF6WH68 1400 aa11.42□□□□□ -0.58
VPS8-204ENST00000424463 UNC13BO14795 1591 aa11.42□□□□□ -0.58
VPS8-204ENST00000424463 CD109Q6YHK3 1445 aa11.42□□□□□ -0.58
VPS8-204ENST00000424463 SPATA31E1Q6ZUB1 1445 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 267.3 ms