RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 GBP4Q96PP9 640 aa23.01■■□□□ 1.27
SHANK3-202ENST00000414786 EIF4G1Q04637 1599 aaKnown RBP23.01■■□□□ 1.27
SHANK3-202ENST00000414786 IPO8O15397 1037 aaKnown RBP23■■□□□ 1.27
SHANK3-202ENST00000414786 APPP05067 770 aa23■■□□□ 1.27
SHANK3-202ENST00000414786 DCAF8L1A6NGE4 600 aa22.99■■□□□ 1.27
SHANK3-202ENST00000414786 VPS37DQ86XT2 251 aa22.99■■□□□ 1.27
SHANK3-202ENST00000414786 CCDC34Q96HJ3 373 aa22.99■■□□□ 1.27
SHANK3-202ENST00000414786 RSF1Q96T23 1441 aaPredicted RBP22.98■■□□□ 1.27
SHANK3-202ENST00000414786 NOL10Q9BSC4 688 aaKnown RBP22.98■■□□□ 1.27
SHANK3-202ENST00000414786 ZNF592Q92610 1267 aa22.97■■□□□ 1.27
SHANK3-202ENST00000414786 TSR1Q2NL82 804 aaKnown RBP22.97■■□□□ 1.27
SHANK3-202ENST00000414786 CCDC43Q96MW1 224 aaKnown RBP22.96■■□□□ 1.27
SHANK3-202ENST00000414786 EIF2S2P20042 333 aaKnown RBP22.96■■□□□ 1.27
SHANK3-202ENST00000414786 RRP7AQ9Y3A4 280 aaKnown RBP22.96■■□□□ 1.27
SHANK3-202ENST00000414786 CLIP1P30622 1438 aa22.96■■□□□ 1.27
SHANK3-202ENST00000414786 PTMSP20962 102 aa22.96■■□□□ 1.27
SHANK3-202ENST00000414786 ZFYVE27Q5T4F4 411 aa22.95■■□□□ 1.26
SHANK3-202ENST00000414786 KIF16BQ96L93 1317 aa22.94■■□□□ 1.26
SHANK3-202ENST00000414786 FAM184AQ8NB25 1140 aa22.94■■□□□ 1.26
SHANK3-202ENST00000414786 SKIDA1Q1XH10 827 aa22.94■■□□□ 1.26
SHANK3-202ENST00000414786 SYAP1Q96A49 352 aaPredicted RBP22.92■■□□□ 1.26
SHANK3-202ENST00000414786 FAM177BA6PVY3 158 aa22.91■■□□□ 1.26
SHANK3-202ENST00000414786 TMEM132AQ24JP5 1023 aa22.91■■□□□ 1.26
SHANK3-202ENST00000414786 ZNF428Q96B54 188 aa22.91■■□□□ 1.26
SHANK3-202ENST00000414786 EID1Q9Y6B2 187 aa22.9■■□□□ 1.26
SHANK3-202ENST00000414786 NAP1L1P55209 391 aaKnown RBP22.89■■□□□ 1.25
SHANK3-202ENST00000414786 TPM2P07951 284 aa22.88■■□□□ 1.25
SHANK3-202ENST00000414786 AMOTL1Q8IY63 956 aa22.88■■□□□ 1.25
SHANK3-202ENST00000414786 CALD1Q05682 793 aaKnown RBP22.88■■□□□ 1.25
SHANK3-202ENST00000414786 BCL2L13Q9BXK5 485 aa22.87■■□□□ 1.25
SHANK3-202ENST00000414786 RWDD1Q9H446 243 aaPredicted RBP22.87■■□□□ 1.25
SHANK3-202ENST00000414786 C1orf141Q5JVX7 400 aa22.85■■□□□ 1.25
SHANK3-202ENST00000414786 PLIN1O60240 522 aa22.85■■□□□ 1.25
SHANK3-202ENST00000414786 TCERG1O14776 1098 aaKnown RBP22.85■■□□□ 1.25
SHANK3-202ENST00000414786 IKQ13123 557 aaPredicted RBP22.85■■□□□ 1.25
SHANK3-202ENST00000414786 SYNE3Q6ZMZ3 975 aa22.85■■□□□ 1.25
SHANK3-202ENST00000414786 DHX37Q8IY37 1157 aaKnown RBP22.85■■□□□ 1.25
SHANK3-202ENST00000414786 CT47A1Q5JQC4 288 aaPredicted RBP22.85■■□□□ 1.25
SHANK3-202ENST00000414786 CCAR1Q8IX12 1150 aaKnown RBP22.84■■□□□ 1.25
SHANK3-202ENST00000414786 SETQ01105 290 aaPredicted RBP22.84■■□□□ 1.25
SHANK3-202ENST00000414786 CCNB3Q8WWL7 1395 aa22.84■■□□□ 1.25
SHANK3-202ENST00000414786 ODF2Q5BJF6 829 aa22.84■■□□□ 1.25
SHANK3-202ENST00000414786 CCDC27Q2M243 656 aa22.83■■□□□ 1.24
SHANK3-202ENST00000414786 PPM1FP49593 454 aaPredicted RBP22.81■■□□□ 1.24
SHANK3-202ENST00000414786 NFXL1Q6ZNB6 911 aa22.81■■□□□ 1.24
SHANK3-202ENST00000414786 RRP12Q5JTH9 1297 aaKnown RBP22.81■■□□□ 1.24
SHANK3-202ENST00000414786 WDR70Q9NW82 654 aa22.81■■□□□ 1.24
SHANK3-202ENST00000414786 HMMRO75330 724 aa22.8■■□□□ 1.24
SHANK3-202ENST00000414786 RBM33Q96EV2 1170 aaKnown RBP22.79■■□□□ 1.24
SHANK3-202ENST00000414786 GOLGA6L19H0YKK7 550 aa22.79■■□□□ 1.24
SHANK3-202ENST00000414786 R3HCC1Q9Y3T6 440 aaKnown RBP22.79■■□□□ 1.24
SHANK3-202ENST00000414786 GOLGA6L3A6NEY3 463 aa22.79■■□□□ 1.24
SHANK3-202ENST00000414786 USP35Q9P2H5 1018 aa22.79■■□□□ 1.24
SHANK3-202ENST00000414786 ROCK2O75116 1388 aaKnown RBP22.77■■□□□ 1.24
SHANK3-202ENST00000414786 CSPP1Q1MSJ5 1256 aa22.77■■□□□ 1.24
SHANK3-202ENST00000414786 CFAP44Q96MT7 982 aa22.77■■□□□ 1.24
SHANK3-202ENST00000414786 BECN2A8MW95 431 aa22.77■■□□□ 1.24
SHANK3-202ENST00000414786 TTC5Q8N0Z6 440 aa22.77■■□□□ 1.24
SHANK3-202ENST00000414786 PKD2Q13563 968 aa22.77■■□□□ 1.24
SHANK3-202ENST00000414786 TRAK1Q9UPV9 953 aa22.77■■□□□ 1.24
SHANK3-202ENST00000414786 STK11IPQ8N1F8 1099 aa22.77■■□□□ 1.23
SHANK3-202ENST00000414786 TTLL5Q6EMB2 1281 aa22.76■■□□□ 1.23
SHANK3-202ENST00000414786 RCAN3Q9UKA8 241 aa22.76■■□□□ 1.23
SHANK3-202ENST00000414786 TRIM29Q14134 588 aa22.76■■□□□ 1.23
SHANK3-202ENST00000414786 HSPA5P11021 654 aaKnown RBP22.75■■□□□ 1.23
SHANK3-202ENST00000414786 KTN1Q86UP2 1357 aaKnown RBP22.75■■□□□ 1.23
SHANK3-202ENST00000414786 ANKRD45Q5TZF3 282 aa22.74■■□□□ 1.23
SHANK3-202ENST00000414786 TPM1P09493 284 aa22.74■■□□□ 1.23
SHANK3-202ENST00000414786 HSP90AB2PQ58FF8 381 aa22.73■■□□□ 1.23
SHANK3-202ENST00000414786 KIF3BO15066 747 aa22.73■■□□□ 1.23
SHANK3-202ENST00000414786 ANO2Q9NQ90 1003 aa22.72■■□□□ 1.23
SHANK3-202ENST00000414786 NUTM2GQ5VZR2 741 aa22.72■■□□□ 1.23
SHANK3-202ENST00000414786 C9orf78Q9NZ63 289 aaPredicted RBP22.71■■□□□ 1.23
SHANK3-202ENST00000414786 CHMP4CQ96CF2 233 aa22.7■■□□□ 1.22
SHANK3-202ENST00000414786 CALRP27797 417 aaKnown RBP22.69■■□□□ 1.22
SHANK3-202ENST00000414786 AIMP1Q12904 312 aaKnown RBP22.69■■□□□ 1.22
SHANK3-202ENST00000414786 CCDC70Q6NSX1 233 aa22.69■■□□□ 1.22
SHANK3-202ENST00000414786 ST18O60284 1047 aa22.68■■□□□ 1.22
SHANK3-202ENST00000414786 TEFQ10587 303 aa22.68■■□□□ 1.22
SHANK3-202ENST00000414786 PMFBP1Q8TBY8 1022 aa22.67■■□□□ 1.22
SHANK3-202ENST00000414786 CCDC97Q96F63 343 aaPredicted RBP22.67■■□□□ 1.22
SHANK3-202ENST00000414786 CHMP4BP1P59074 171 aa22.67■■□□□ 1.22
SHANK3-202ENST00000414786 ATP2B2Q01814 1243 aa22.67■■□□□ 1.22
SHANK3-202ENST00000414786 EPS15P42566 896 aa22.66■■□□□ 1.22
SHANK3-202ENST00000414786 CPLX1O14810 134 aa22.66■■□□□ 1.22
SHANK3-202ENST00000414786 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.66■■□□□ 1.22
SHANK3-202ENST00000414786 DCAF1Q9Y4B6 1507 aa22.66■■□□□ 1.22
SHANK3-202ENST00000414786 DIAPH3Q9NSV4 1193 aa22.66■■□□□ 1.22
SHANK3-202ENST00000414786 HOMER1Q86YM7 354 aa22.65■■□□□ 1.22
SHANK3-202ENST00000414786 ZNF771Q7L3S4 317 aaPredicted RBP22.65■■□□□ 1.22
SHANK3-202ENST00000414786 TERF2IPQ9NYB0 399 aa22.64■■□□□ 1.22
SHANK3-202ENST00000414786 WASHC2CQ9Y4E1 1318 aa22.64■■□□□ 1.22
SHANK3-202ENST00000414786 KIF3AQ9Y496 699 aa22.64■■□□□ 1.21
SHANK3-202ENST00000414786 PLCD4Q9BRC7 762 aa22.63■■□□□ 1.21
SHANK3-202ENST00000414786 RBM19Q9Y4C8 960 aaKnown RBP22.63■■□□□ 1.21
SHANK3-202ENST00000414786 ERICH2A1L162 156 aa22.63■■□□□ 1.21
SHANK3-202ENST00000414786 PSME1Q06323 249 aa22.63■■□□□ 1.21
SHANK3-202ENST00000414786 NEUROD6Q96NK8 337 aa22.62■■□□□ 1.21
SHANK3-202ENST00000414786 AK7Q96M32 723 aa22.62■■□□□ 1.21
SHANK3-202ENST00000414786 IPO7O95373 1038 aaKnown RBP22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms