RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 BCAMP50895 628 aa8.18□□□□□ -1.1
HMGB3P2-201ENST00000411913 MFSD10Q14728 455 aa8.18□□□□□ -1.1
HMGB3P2-201ENST00000411913 LAPTM4BQ86VI4 370 aa8.17□□□□□ -1.1
HMGB3P2-201ENST00000411913 KIAA1468Q9P260 1216 aa8.17□□□□□ -1.1
HMGB3P2-201ENST00000411913 PHF14O94880 888 aa8.16□□□□□ -1.1
HMGB3P2-201ENST00000411913 ITGBL1O95965 494 aaPredicted RBP8.16□□□□□ -1.1
HMGB3P2-201ENST00000411913 DCAF8L2P0C7V8 631 aa8.16□□□□□ -1.1
HMGB3P2-201ENST00000411913 SOWAHBA6NEL2 793 aa8.15□□□□□ -1.1
HMGB3P2-201ENST00000411913 ZFRQ96KR1 1074 aaKnown RBP8.15□□□□□ -1.1
HMGB3P2-201ENST00000411913 NYAP1Q6ZVC0 841 aa8.14□□□□□ -1.11
HMGB3P2-201ENST00000411913 KCNC4Q03721 635 aa8.13□□□□□ -1.11
HMGB3P2-201ENST00000411913 C6orf132Q5T0Z8 1188 aa8.12□□□□□ -1.11
HMGB3P2-201ENST00000411913 Q6ZNB5 142 aa8.12□□□□□ -1.11
HMGB3P2-201ENST00000411913 WBP1LQ9NX94 342 aa8.12□□□□□ -1.11
HMGB3P2-201ENST00000411913 SEPT9Q9UHD8 586 aaPredicted RBP8.12□□□□□ -1.11
HMGB3P2-201ENST00000411913 ONECUT3O60422 494 aaPredicted RBP8.11□□□□□ -1.11
HMGB3P2-201ENST00000411913 EPAS1Q99814 870 aa8.11□□□□□ -1.11
HMGB3P2-201ENST00000411913 RBM33Q96EV2 1170 aaKnown RBP8.1□□□□□ -1.11
HMGB3P2-201ENST00000411913 FAM98CQ17RN3 349 aaKnown RBP8.09□□□□□ -1.11
HMGB3P2-201ENST00000411913 CADPS2Q86UW7 1296 aa8.09□□□□□ -1.11
HMGB3P2-201ENST00000411913 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.09□□□□□ -1.11
HMGB3P2-201ENST00000411913 TRIM6-TRIM34B2RNG4 842 aa8.08□□□□□ -1.12
HMGB3P2-201ENST00000411913 DPYSL4O14531 572 aa8.08□□□□□ -1.12
HMGB3P2-201ENST00000411913 LRCH3Q96II8 777 aa8.08□□□□□ -1.12
HMGB3P2-201ENST00000411913 HPS5Q9UPZ3 1129 aa8.08□□□□□ -1.12
HMGB3P2-201ENST00000411913 TSR3Q9UJK0 312 aaKnown RBP8.07□□□□□ -1.12
HMGB3P2-201ENST00000411913 DDX12PQ92771 950 aa8.06□□□□□ -1.12
HMGB3P2-201ENST00000411913 CAMK2BQ13554 666 aa8.04□□□□□ -1.12
HMGB3P2-201ENST00000411913 PACS2Q86VP3 889 aa8.04□□□□□ -1.12
HMGB3P2-201ENST00000411913 MAP3K7O43318 606 aa8.02□□□□□ -1.13
HMGB3P2-201ENST00000411913 PPP4CP60510 307 aa8.02□□□□□ -1.13
HMGB3P2-201ENST00000411913 LAPTM4AQ15012 233 aa8.02□□□□□ -1.13
HMGB3P2-201ENST00000411913 NBR1Q14596 966 aa8.01□□□□□ -1.13
HMGB3P2-201ENST00000411913 GFRA3O60609 400 aa7.99□□□□□ -1.13
HMGB3P2-201ENST00000411913 EN1Q05925 392 aaPredicted RBP7.99□□□□□ -1.13
HMGB3P2-201ENST00000411913 TSR1Q2NL82 804 aaKnown RBP7.99□□□□□ -1.13
HMGB3P2-201ENST00000411913 TSKSQ9UJT2 592 aa7.99□□□□□ -1.13
HMGB3P2-201ENST00000411913 SMAPO00193 183 aa7.96□□□□□ -1.14
HMGB3P2-201ENST00000411913 TRAF7Q6Q0C0 670 aa7.96□□□□□ -1.14
HMGB3P2-201ENST00000411913 SAMD7Q7Z3H4 446 aa7.96□□□□□ -1.14
HMGB3P2-201ENST00000411913 CDCA7LQ96GN5 454 aa7.95□□□□□ -1.14
HMGB3P2-201ENST00000411913 PRKD2Q9BZL6 878 aa7.95□□□□□ -1.14
HMGB3P2-201ENST00000411913 PRSS12P56730 875 aa7.94□□□□□ -1.14
HMGB3P2-201ENST00000411913 TJAP1Q5JTD0 557 aa7.94□□□□□ -1.14
HMGB3P2-201ENST00000411913 SPDYE16A6NNV3 312 aaPredicted RBP7.93□□□□□ -1.14
HMGB3P2-201ENST00000411913 HDGFP51858 240 aaKnown RBP7.93□□□□□ -1.14
HMGB3P2-201ENST00000411913 PDIA6Q15084 440 aa7.93□□□□□ -1.14
HMGB3P2-201ENST00000411913 CERKQ8TCT0 537 aa7.93□□□□□ -1.14
HMGB3P2-201ENST00000411913 IL21Q9HBE4 155 aa7.93□□□□□ -1.14
HMGB3P2-201ENST00000411913 RNF40O75150 1001 aa7.92□□□□□ -1.14
HMGB3P2-201ENST00000411913 MTRQ99707 1265 aa7.92□□□□□ -1.14
HMGB3P2-201ENST00000411913 PNMA3Q9UL41 463 aa7.92□□□□□ -1.14
HMGB3P2-201ENST00000411913 GRXCR2A6NFK2 248 aa7.91□□□□□ -1.14
HMGB3P2-201ENST00000411913 NBPF26B4DH59 902 aa7.91□□□□□ -1.14
HMGB3P2-201ENST00000411913 PPP1R18Q6NYC8 613 aa7.91□□□□□ -1.14
HMGB3P2-201ENST00000411913 TATDN2Q93075 761 aa7.91□□□□□ -1.14
HMGB3P2-201ENST00000411913 NRG2O14511 850 aaPredicted RBP7.9□□□□□ -1.14
HMGB3P2-201ENST00000411913 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.89□□□□□ -1.15
HMGB3P2-201ENST00000411913 FAM198AQ9UFP1 575 aa7.89□□□□□ -1.15
HMGB3P2-201ENST00000411913 V9GY48 417 aaPredicted RBP7.89□□□□□ -1.15
HMGB3P2-201ENST00000411913 LCE2BO14633 110 aa7.88□□□□□ -1.15
HMGB3P2-201ENST00000411913 ZNF516Q92618 1163 aa7.88□□□□□ -1.15
HMGB3P2-201ENST00000411913 NUDT18Q6ZVK8 323 aa7.87□□□□□ -1.15
HMGB3P2-201ENST00000411913 BBXQ8WY36 941 aaPredicted RBP7.87□□□□□ -1.15
HMGB3P2-201ENST00000411913 C3orf80F5H4A9 247 aa7.86□□□□□ -1.15
HMGB3P2-201ENST00000411913 E2F4Q16254 413 aa7.86□□□□□ -1.15
HMGB3P2-201ENST00000411913 GGCXP38435 758 aa7.85□□□□□ -1.15
HMGB3P2-201ENST00000411913 PRIM1P49642 420 aaKnown RBP7.85□□□□□ -1.15
HMGB3P2-201ENST00000411913 APLP1P51693 650 aa7.85□□□□□ -1.15
HMGB3P2-201ENST00000411913 NECTIN2Q92692 538 aa7.85□□□□□ -1.15
HMGB3P2-201ENST00000411913 WDR70Q9NW82 654 aa7.84□□□□□ -1.15
HMGB3P2-201ENST00000411913 PDZRN3Q9UPQ7 1066 aa7.84□□□□□ -1.15
HMGB3P2-201ENST00000411913 SLC4A3P48751 1232 aa7.83□□□□□ -1.16
HMGB3P2-201ENST00000411913 NKX2-3Q8TAU0 364 aa7.83□□□□□ -1.16
HMGB3P2-201ENST00000411913 CDHR5Q9HBB8 845 aa7.83□□□□□ -1.16
HMGB3P2-201ENST00000411913 COPS2P61201 443 aa7.82□□□□□ -1.16
HMGB3P2-201ENST00000411913 ZNF787Q6DD87 383 aa7.82□□□□□ -1.16
HMGB3P2-201ENST00000411913 SPRYD3Q8NCJ5 442 aa7.82□□□□□ -1.16
HMGB3P2-201ENST00000411913 SWT1Q5T5J6 900 aaKnown RBP7.81□□□□□ -1.16
HMGB3P2-201ENST00000411913 SLF2Q8IX21 1173 aa7.81□□□□□ -1.16
HMGB3P2-201ENST00000411913 RBM27Q9P2N5 1060 aaKnown RBP7.81□□□□□ -1.16
HMGB3P2-201ENST00000411913 OSBPP22059 807 aa7.8□□□□□ -1.16
HMGB3P2-201ENST00000411913 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.79□□□□□ -1.16
HMGB3P2-201ENST00000411913 ARIH1Q9Y4X5 557 aaPredicted RBP7.79□□□□□ -1.16
HMGB3P2-201ENST00000411913 PADI6Q6TGC4 694 aa7.78□□□□□ -1.16
HMGB3P2-201ENST00000411913 TMUB1Q9BVT8 246 aa7.78□□□□□ -1.16
HMGB3P2-201ENST00000411913 ZPR1O75312 459 aa7.76□□□□□ -1.17
HMGB3P2-201ENST00000411913 PRR14Q9BWN1 585 aa7.76□□□□□ -1.17
HMGB3P2-201ENST00000411913 PCDHB3Q9Y5E6 796 aa7.75□□□□□ -1.17
HMGB3P2-201ENST00000411913 TTC13Q8NBP0 860 aa7.74□□□□□ -1.17
HMGB3P2-201ENST00000411913 SLC19A1P41440 591 aa7.73□□□□□ -1.17
HMGB3P2-201ENST00000411913 NPDC1Q9NQX5 325 aaPredicted RBP7.73□□□□□ -1.17
HMGB3P2-201ENST00000411913 ZNF775Q96BV0 537 aaPredicted RBP7.72□□□□□ -1.17
HMGB3P2-201ENST00000411913 CFAP44Q96MT7 982 aa7.72□□□□□ -1.17
HMGB3P2-201ENST00000411913 EYA1Q99502 592 aa7.72□□□□□ -1.17
HMGB3P2-201ENST00000411913 RNF223E7ERA6 249 aa7.71□□□□□ -1.18
HMGB3P2-201ENST00000411913 PKDCCQ504Y2 493 aa7.71□□□□□ -1.18
HMGB3P2-201ENST00000411913 BLOC1S3Q6QNY0 202 aa7.71□□□□□ -1.18
HMGB3P2-201ENST00000411913 PAXIP1Q6ZW49 1069 aaPredicted RBP7.7□□□□□ -1.18
HMGB3P2-201ENST00000411913 TRIM67Q6ZTA4 783 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms