RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 IL27Q8NEV9 243 aa8.14□□□□□ -1.11
RNU2-28P-201ENST00000410457 PHF14O94880 888 aa8.13□□□□□ -1.11
RNU2-28P-201ENST00000410457 EMP3P54852 163 aa8.13□□□□□ -1.11
RNU2-28P-201ENST00000410457 EPAS1Q99814 870 aa8.13□□□□□ -1.11
RNU2-28P-201ENST00000410457 DDRGK1Q96HY6 314 aa8.12□□□□□ -1.11
RNU2-28P-201ENST00000410457 FECHP22830 423 aa8.11□□□□□ -1.11
RNU2-28P-201ENST00000410457 EN1Q05925 392 aaPredicted RBP8.11□□□□□ -1.11
RNU2-28P-201ENST00000410457 PARP9Q8IXQ6 854 aa8.11□□□□□ -1.11
RNU2-28P-201ENST00000410457 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.11□□□□□ -1.11
RNU2-28P-201ENST00000410457 FAM117AQ9C073 453 aa8.1□□□□□ -1.11
RNU2-28P-201ENST00000410457 HS3ST6Q96QI5 342 aa8.08□□□□□ -1.12
RNU2-28P-201ENST00000410457 PCDHGA4Q9Y5G9 962 aa8.08□□□□□ -1.12
RNU2-28P-201ENST00000410457 MAP3K7O43318 606 aa8.07□□□□□ -1.12
RNU2-28P-201ENST00000410457 TYW1BQ6NUM6 668 aa8.07□□□□□ -1.12
RNU2-28P-201ENST00000410457 FBXW7Q969H0 707 aa8.07□□□□□ -1.12
RNU2-28P-201ENST00000410457 NPDC1Q9NQX5 325 aaPredicted RBP8.07□□□□□ -1.12
RNU2-28P-201ENST00000410457 PCDHGA10Q9Y5H3 936 aa8.07□□□□□ -1.12
RNU2-28P-201ENST00000410457 KDM4FA0A1W2PPD8 638 aa8.06□□□□□ -1.12
RNU2-28P-201ENST00000410457 PLEKHG3A1L390 1219 aa8.06□□□□□ -1.12
RNU2-28P-201ENST00000410457 RNF166Q96A37 237 aaPredicted RBP8.06□□□□□ -1.12
RNU2-28P-201ENST00000410457 JPH4Q96JJ6 628 aa8.06□□□□□ -1.12
RNU2-28P-201ENST00000410457 CDHR5Q9HBB8 845 aa8.06□□□□□ -1.12
RNU2-28P-201ENST00000410457 TTLL12Q14166 644 aaPredicted RBP8.05□□□□□ -1.12
RNU2-28P-201ENST00000410457 GOPCQ9HD26 462 aa8.05□□□□□ -1.12
RNU2-28P-201ENST00000410457 ARXQ96QS3 562 aa8.04□□□□□ -1.12
RNU2-28P-201ENST00000410457 GIGYF2Q6Y7W6 1299 aaKnown RBP8.03□□□□□ -1.12
RNU2-28P-201ENST00000410457 CERKQ8TCT0 537 aa8.03□□□□□ -1.12
RNU2-28P-201ENST00000410457 RBM33Q96EV2 1170 aaKnown RBP8.02□□□□□ -1.13
RNU2-28P-201ENST00000410457 CLCN1P35523 988 aa8.01□□□□□ -1.13
RNU2-28P-201ENST00000410457 FOSBP53539 338 aa8.01□□□□□ -1.13
RNU2-28P-201ENST00000410457 TSR1Q2NL82 804 aaKnown RBP8.01□□□□□ -1.13
RNU2-28P-201ENST00000410457 TMUB1Q9BVT8 246 aa8.01□□□□□ -1.13
RNU2-28P-201ENST00000410457 FAM205CA6NFA0 338 aa8□□□□□ -1.13
RNU2-28P-201ENST00000410457 RBM27Q9P2N5 1060 aaKnown RBP8□□□□□ -1.13
RNU2-28P-201ENST00000410457 POTEB3A0JP26 581 aa7.99□□□□□ -1.13
RNU2-28P-201ENST00000410457 MS4A1P11836 297 aa7.99□□□□□ -1.13
RNU2-28P-201ENST00000410457 DOK7Q18PE1 504 aa7.99□□□□□ -1.13
RNU2-28P-201ENST00000410457 POTEBQ6S5H4 581 aa7.99□□□□□ -1.13
RNU2-28P-201ENST00000410457 REPIN1Q9BWE0 567 aaKnown RBP7.99□□□□□ -1.13
RNU2-28P-201ENST00000410457 ZSWIM6Q9HCJ5 1215 aa7.99□□□□□ -1.13
RNU2-28P-201ENST00000410457 GPCPD1Q9NPB8 672 aa7.99□□□□□ -1.13
RNU2-28P-201ENST00000410457 ZDHHC16Q969W1 377 aa7.98□□□□□ -1.13
RNU2-28P-201ENST00000410457 RIMBP2O15034 1052 aa7.97□□□□□ -1.13
RNU2-28P-201ENST00000410457 OATP04181 439 aa7.97□□□□□ -1.13
RNU2-28P-201ENST00000410457 C6orf132Q5T0Z8 1188 aa7.97□□□□□ -1.13
RNU2-28P-201ENST00000410457 MDM2Q00987 491 aaPredicted RBP7.96□□□□□ -1.14
RNU2-28P-201ENST00000410457 METTL3Q86U44 580 aaKnown RBP7.96□□□□□ -1.14
RNU2-28P-201ENST00000410457 ZNF454Q8N9F8 522 aa7.96□□□□□ -1.14
RNU2-28P-201ENST00000410457 TTC13Q8NBP0 860 aa7.96□□□□□ -1.14
RNU2-28P-201ENST00000410457 PHOX2BQ99453 314 aa7.96□□□□□ -1.14
RNU2-28P-201ENST00000410457 ZMYND15Q9H091 742 aa7.96□□□□□ -1.14
RNU2-28P-201ENST00000410457 HOXB3P14651 431 aaPredicted RBP7.95□□□□□ -1.14
RNU2-28P-201ENST00000410457 NUDT7P0C024 238 aa7.94□□□□□ -1.14
RNU2-28P-201ENST00000410457 FLIIQ13045 1269 aa7.94□□□□□ -1.14
RNU2-28P-201ENST00000410457 SH3D19Q5HYK7 790 aa7.94□□□□□ -1.14
RNU2-28P-201ENST00000410457 PADI6Q6TGC4 694 aa7.94□□□□□ -1.14
RNU2-28P-201ENST00000410457 MYT1LQ9UL68 1186 aa7.94□□□□□ -1.14
RNU2-28P-201ENST00000410457 ADGRG1Q9Y653 693 aa7.94□□□□□ -1.14
RNU2-28P-201ENST00000410457 SSTR3P32745 418 aaPredicted RBP7.93□□□□□ -1.14
RNU2-28P-201ENST00000410457 GPR153Q6NV75 609 aa7.93□□□□□ -1.14
RNU2-28P-201ENST00000410457 PXYLP1Q8TE99 480 aa7.93□□□□□ -1.14
RNU2-28P-201ENST00000410457 PCMTD1Q96MG8 357 aaPredicted RBP7.93□□□□□ -1.14
RNU2-28P-201ENST00000410457 RSPH6AQ9H0K4 717 aa7.93□□□□□ -1.14
RNU2-28P-201ENST00000410457 SUPT5HO00267 1087 aaKnown RBP7.92□□□□□ -1.14
RNU2-28P-201ENST00000410457 ARSIQ5FYB1 569 aa7.92□□□□□ -1.14
RNU2-28P-201ENST00000410457 ADAM33Q9BZ11 813 aa7.92□□□□□ -1.14
RNU2-28P-201ENST00000410457 FAM217BQ9NTX9 383 aaPredicted RBP7.92□□□□□ -1.14
RNU2-28P-201ENST00000410457 PSDA5PKW4 1024 aaPredicted RBP7.91□□□□□ -1.14
RNU2-28P-201ENST00000410457 PRSS12P56730 875 aa7.91□□□□□ -1.14
RNU2-28P-201ENST00000410457 ONECUT3O60422 494 aaPredicted RBP7.9□□□□□ -1.14
RNU2-28P-201ENST00000410457 HOMEZQ8IX15 550 aa7.9□□□□□ -1.14
RNU2-28P-201ENST00000410457 KHSRPQ92945 711 aaKnown RBP eCLIP7.9□□□□□ -1.14
RNU2-28P-201ENST00000410457 SKIV2LQ15477 1246 aaKnown RBP7.89□□□□□ -1.15
RNU2-28P-201ENST00000410457 FAM161AQ3B820 660 aa7.89□□□□□ -1.15
RNU2-28P-201ENST00000410457 PPP4R3BQ5MIZ7 849 aa7.89□□□□□ -1.15
RNU2-28P-201ENST00000410457 ZNF710Q8N1W2 664 aa7.89□□□□□ -1.15
RNU2-28P-201ENST00000410457 RBM46Q8TBY0 533 aaKnown RBP7.89□□□□□ -1.15
RNU2-28P-201ENST00000410457 CDCA7LQ96GN5 454 aa7.89□□□□□ -1.15
RNU2-28P-201ENST00000410457 BEGAINQ9BUH8 593 aa7.89□□□□□ -1.15
RNU2-28P-201ENST00000410457 BCL2L12Q9HB09 334 aa7.88□□□□□ -1.15
RNU2-28P-201ENST00000410457 LHX6Q9UPM6 363 aa7.87□□□□□ -1.15
RNU2-28P-201ENST00000410457 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.86□□□□□ -1.15
RNU2-28P-201ENST00000410457 DIXDC1Q155Q3 683 aa7.86□□□□□ -1.15
RNU2-28P-201ENST00000410457 PPP1R3GB7ZBB8 358 aa7.85□□□□□ -1.15
RNU2-28P-201ENST00000410457 NLRP7Q8WX94 980 aa7.85□□□□□ -1.15
RNU2-28P-201ENST00000410457 COL9A1P20849 921 aa7.83□□□□□ -1.16
RNU2-28P-201ENST00000410457 PTPREP23469 700 aa7.83□□□□□ -1.16
RNU2-28P-201ENST00000410457 MYSM1Q5VVJ2 828 aa7.83□□□□□ -1.16
RNU2-28P-201ENST00000410457 EYA1Q99502 592 aa7.83□□□□□ -1.16
RNU2-28P-201ENST00000410457 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.83□□□□□ -1.16
RNU2-28P-201ENST00000410457 MCM6Q14566 821 aa7.82□□□□□ -1.16
RNU2-28P-201ENST00000410457 FAM198AQ9UFP1 575 aa7.82□□□□□ -1.16
RNU2-28P-201ENST00000410457 RCCD1A6NED2 376 aa7.81□□□□□ -1.16
RNU2-28P-201ENST00000410457 A6NJR5 290 aa7.81□□□□□ -1.16
RNU2-28P-201ENST00000410457 NBPF26B4DH59 902 aa7.81□□□□□ -1.16
RNU2-28P-201ENST00000410457 HOXB1P14653 301 aaPredicted RBP7.81□□□□□ -1.16
RNU2-28P-201ENST00000410457 CLK2P49760 499 aaKnown RBP7.81□□□□□ -1.16
RNU2-28P-201ENST00000410457 TSKSQ9UJT2 592 aa7.81□□□□□ -1.16
RNU2-28P-201ENST00000410457 DNAJB2P25686 324 aa7.8□□□□□ -1.16
RNU2-28P-201ENST00000410457 SULF1Q8IWU6 871 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms