RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 TIMELESSQ9UNS1 1208 aa10.57□□□□□ -0.72
LSM5-206ENST00000409987 FOSBP53539 338 aa10.56□□□□□ -0.72
LSM5-206ENST00000409987 AMHR2Q16671 573 aa10.56□□□□□ -0.72
LSM5-206ENST00000409987 DOK7Q18PE1 504 aa10.56□□□□□ -0.72
LSM5-206ENST00000409987 NUDT7P0C024 238 aa10.55□□□□□ -0.72
LSM5-206ENST00000409987 ARSIQ5FYB1 569 aa10.55□□□□□ -0.72
LSM5-206ENST00000409987 FBXW7Q969H0 707 aa10.54□□□□□ -0.72
LSM5-206ENST00000409987 GPR153Q6NV75 609 aa10.53□□□□□ -0.72
LSM5-206ENST00000409987 PARP9Q8IXQ6 854 aa10.53□□□□□ -0.72
LSM5-206ENST00000409987 IL27Q8NEV9 243 aa10.53□□□□□ -0.72
LSM5-206ENST00000409987 SCUBE2Q9NQ36 999 aa10.53□□□□□ -0.72
LSM5-206ENST00000409987 MAMSTRQ6ZN01 415 aa10.52□□□□□ -0.73
LSM5-206ENST00000409987 ZSWIM6Q9HCJ5 1215 aa10.52□□□□□ -0.73
LSM5-206ENST00000409987 ZNF454Q8N9F8 522 aa10.51□□□□□ -0.73
LSM5-206ENST00000409987 RIMBP2O15034 1052 aa10.5□□□□□ -0.73
LSM5-206ENST00000409987 ZDHHC16Q969W1 377 aa10.5□□□□□ -0.73
LSM5-206ENST00000409987 C6orf132Q5T0Z8 1188 aa10.49□□□□□ -0.73
LSM5-206ENST00000409987 FAM117AQ9C073 453 aa10.49□□□□□ -0.73
LSM5-206ENST00000409987 ADAM33Q9BZ11 813 aa10.48□□□□□ -0.73
LSM5-206ENST00000409987 ZNF710Q8N1W2 664 aa10.47□□□□□ -0.73
LSM5-206ENST00000409987 DAXXQ9UER7 740 aaPredicted RBP10.47□□□□□ -0.73
LSM5-206ENST00000409987 TTLL12Q14166 644 aaPredicted RBP10.46□□□□□ -0.73
LSM5-206ENST00000409987 LHX6Q9UPM6 363 aa10.46□□□□□ -0.73
LSM5-206ENST00000409987 PLEKHG3A1L390 1219 aa10.45□□□□□ -0.74
LSM5-206ENST00000409987 PADI6Q6TGC4 694 aa10.44□□□□□ -0.74
LSM5-206ENST00000409987 CERKQ8TCT0 537 aa10.44□□□□□ -0.74
LSM5-206ENST00000409987 PHOX2BQ99453 314 aa10.44□□□□□ -0.74
LSM5-206ENST00000409987 REPIN1Q9BWE0 567 aaKnown RBP10.44□□□□□ -0.74
LSM5-206ENST00000409987 FAM161AQ3B820 660 aa10.43□□□□□ -0.74
LSM5-206ENST00000409987 GIGYF2Q6Y7W6 1299 aaKnown RBP10.43□□□□□ -0.74
LSM5-206ENST00000409987 FAM163AQ96GL9 167 aaPredicted RBP10.43□□□□□ -0.74
LSM5-206ENST00000409987 ERICH6Q7L0X2 663 aa10.42□□□□□ -0.74
LSM5-206ENST00000409987 TTC13Q8NBP0 860 aa10.42□□□□□ -0.74
LSM5-206ENST00000409987 DDRGK1Q96HY6 314 aa10.42□□□□□ -0.74
LSM5-206ENST00000409987 TMUB1Q9BVT8 246 aa10.42□□□□□ -0.74
LSM5-206ENST00000409987 MS4A1P11836 297 aa10.41□□□□□ -0.74
LSM5-206ENST00000409987 C14orf37Q86TY3 774 aa10.4□□□□□ -0.74
LSM5-206ENST00000409987 RBM27Q9P2N5 1060 aaKnown RBP10.4□□□□□ -0.74
LSM5-206ENST00000409987 ADGRG1Q9Y653 693 aa10.4□□□□□ -0.74
LSM5-206ENST00000409987 MDM2Q00987 491 aaPredicted RBP10.39□□□□□ -0.75
LSM5-206ENST00000409987 METTL3Q86U44 580 aaKnown RBP10.39□□□□□ -0.75
LSM5-206ENST00000409987 SNPHO15079 494 aa10.38□□□□□ -0.75
LSM5-206ENST00000409987 HOXB1P14653 301 aaPredicted RBP10.38□□□□□ -0.75
LSM5-206ENST00000409987 COL9A1P20849 921 aa10.38□□□□□ -0.75
LSM5-206ENST00000409987 CLCN1P35523 988 aa10.38□□□□□ -0.75
LSM5-206ENST00000409987 PRSS12P56730 875 aa10.38□□□□□ -0.75
LSM5-206ENST00000409987 PPP4R3BQ5MIZ7 849 aa10.38□□□□□ -0.75
LSM5-206ENST00000409987 PSDA5PKW4 1024 aaPredicted RBP10.37□□□□□ -0.75
LSM5-206ENST00000409987 OATP04181 439 aa10.37□□□□□ -0.75
LSM5-206ENST00000409987 LCE2DQ5TA82 110 aaPredicted RBP10.37□□□□□ -0.75
LSM5-206ENST00000409987 PXYLP1Q8TE99 480 aa10.37□□□□□ -0.75
LSM5-206ENST00000409987 NLRP7Q8WX94 980 aa10.37□□□□□ -0.75
LSM5-206ENST00000409987 CDCA7LQ96GN5 454 aa10.37□□□□□ -0.75
LSM5-206ENST00000409987 BCL2L12Q9HB09 334 aa10.37□□□□□ -0.75
LSM5-206ENST00000409987 GPCPD1Q9NPB8 672 aa10.37□□□□□ -0.75
LSM5-206ENST00000409987 FAM198AQ9UFP1 575 aa10.36□□□□□ -0.75
LSM5-206ENST00000409987 PPP1R3GB7ZBB8 358 aa10.32□□□□□ -0.76
LSM5-206ENST00000409987 PTPREP23469 700 aa10.32□□□□□ -0.76
LSM5-206ENST00000409987 SSTR3P32745 418 aaPredicted RBP10.32□□□□□ -0.76
LSM5-206ENST00000409987 FAM217BQ9NTX9 383 aaPredicted RBP10.31□□□□□ -0.76
LSM5-206ENST00000409987 TSKSQ9UJT2 592 aa10.31□□□□□ -0.76
LSM5-206ENST00000409987 RBM46Q8TBY0 533 aaKnown RBP10.3□□□□□ -0.76
LSM5-206ENST00000409987 GOPCQ9HD26 462 aa10.3□□□□□ -0.76
LSM5-206ENST00000409987 C3orf80F5H4A9 247 aa10.29□□□□□ -0.76
LSM5-206ENST00000409987 EYA1Q99502 592 aa10.28□□□□□ -0.76
LSM5-206ENST00000409987 BEGAINQ9BUH8 593 aa10.27□□□□□ -0.77
LSM5-206ENST00000409987 TRIM6-TRIM34B2RNG4 842 aa10.26□□□□□ -0.77
LSM5-206ENST00000409987 CDAN1Q8IWY9 1227 aa10.26□□□□□ -0.77
LSM5-206ENST00000409987 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.25□□□□□ -0.77
LSM5-206ENST00000409987 RCCD1A6NED2 376 aa10.25□□□□□ -0.77
LSM5-206ENST00000409987 SH3D19Q5HYK7 790 aa10.25□□□□□ -0.77
LSM5-206ENST00000409987 NUDT18Q6ZVK8 323 aa10.25□□□□□ -0.77
LSM5-206ENST00000409987 KCNK17Q96T54 332 aa10.25□□□□□ -0.77
LSM5-206ENST00000409987 PROX2Q3B8N5 592 aa10.24□□□□□ -0.77
LSM5-206ENST00000409987 TATDN2Q93075 761 aa10.23□□□□□ -0.77
LSM5-206ENST00000409987 PCMTD1Q96MG8 357 aaPredicted RBP10.23□□□□□ -0.77
LSM5-206ENST00000409987 NBPF26B4DH59 902 aa10.22□□□□□ -0.77
LSM5-206ENST00000409987 PNMA3Q9UL41 463 aa10.22□□□□□ -0.77
LSM5-206ENST00000409987 PACS2Q86VP3 889 aa10.21□□□□□ -0.77
LSM5-206ENST00000409987 SMAPO00193 183 aa10.2□□□□□ -0.78
LSM5-206ENST00000409987 ONECUT3O60422 494 aaPredicted RBP10.2□□□□□ -0.78
LSM5-206ENST00000409987 PSEN2P49810 448 aa10.2□□□□□ -0.78
LSM5-206ENST00000409987 SKIV2LQ15477 1246 aaKnown RBP10.2□□□□□ -0.78
LSM5-206ENST00000409987 ZBED2Q9BTP6 218 aa10.2□□□□□ -0.78
LSM5-206ENST00000409987 RSPH6AQ9H0K4 717 aa10.2□□□□□ -0.78
LSM5-206ENST00000409987 DNAJB2P25686 324 aa10.19□□□□□ -0.78
LSM5-206ENST00000409987 VARS2Q5ST30 1063 aaKnown RBP10.19□□□□□ -0.78
LSM5-206ENST00000409987 POTEEQ6S8J3 1075 aa10.19□□□□□ -0.78
LSM5-206ENST00000409987 ERBB3P21860 1342 aa10.18□□□□□ -0.78
LSM5-206ENST00000409987 MYSM1Q5VVJ2 828 aa10.18□□□□□ -0.78
LSM5-206ENST00000409987 TMEM134Q9H6X4 195 aa10.18□□□□□ -0.78
LSM5-206ENST00000409987 ST18O60284 1047 aa10.17□□□□□ -0.78
LSM5-206ENST00000409987 PROCA1Q8NCQ7 364 aaPredicted RBP10.17□□□□□ -0.78
LSM5-206ENST00000409987 KCNH8Q96L42 1107 aa10.17□□□□□ -0.78
LSM5-206ENST00000409987 TBC1D2Q9BYX2 928 aa10.17□□□□□ -0.78
LSM5-206ENST00000409987 KIAA1468Q9P260 1216 aa10.17□□□□□ -0.78
LSM5-206ENST00000409987 CD46P15529 392 aa10.16□□□□□ -0.78
LSM5-206ENST00000409987 POLR3EQ9NVU0 708 aa10.16□□□□□ -0.78
LSM5-206ENST00000409987 ARHGAP33O14559 1287 aa10.15□□□□□ -0.78
LSM5-206ENST00000409987 DDX11L8A8MPP1 907 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms