RNA–Protein interactions for RNA: ENST00000409776.6

RGPD1-202, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 6,692 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-202ENST00000409776 MBD3O95983 291 aa5.07□□□□□ -1.6
RGPD1-202ENST00000409776 JAKMIP3Q5VZ66 844 aa5.06□□□□□ -1.6
RGPD1-202ENST00000409776 CAGE1Q8TC20 777 aa5.06□□□□□ -1.6
RGPD1-202ENST00000409776 GBP4Q96PP9 640 aa5.06□□□□□ -1.6
RGPD1-202ENST00000409776 UIMC1Q96RL1 719 aa5.06□□□□□ -1.6
RGPD1-202ENST00000409776 DHX37Q8IY37 1157 aaKnown RBP5.06□□□□□ -1.6
RGPD1-202ENST00000409776 DIAPH3Q9NSV4 1193 aa5.06□□□□□ -1.6
RGPD1-202ENST00000409776 GOLIM4O00461 696 aa5.06□□□□□ -1.6
RGPD1-202ENST00000409776 TDO2P48775 406 aa5.06□□□□□ -1.6
RGPD1-202ENST00000409776 SHROOM4Q9ULL8 1493 aa5.06□□□□□ -1.6
RGPD1-202ENST00000409776 FAM160A1Q05DH4 1040 aa5.05□□□□□ -1.6
RGPD1-202ENST00000409776 RUFY1Q96T51 708 aa5.05□□□□□ -1.6
RGPD1-202ENST00000409776 ZC4H2Q9NQZ6 224 aa5.05□□□□□ -1.6
RGPD1-202ENST00000409776 PLEKHG5O94827 1062 aa5.05□□□□□ -1.6
RGPD1-202ENST00000409776 LCA5Q86VQ0 697 aa5.05□□□□□ -1.6
RGPD1-202ENST00000409776 LIMCH1Q9UPQ0 1083 aa5.05□□□□□ -1.6
RGPD1-202ENST00000409776 CCP110O43303 1012 aa5.05□□□□□ -1.6
RGPD1-202ENST00000409776 HSCBQ8IWL3 235 aa5.05□□□□□ -1.6
RGPD1-202ENST00000409776 CCAR2Q8N163 923 aaKnown RBP5.05□□□□□ -1.6
RGPD1-202ENST00000409776 IPO4Q8TEX9 1081 aaKnown RBP5.05□□□□□ -1.6
RGPD1-202ENST00000409776 BBXQ8WY36 941 aaPredicted RBP5.05□□□□□ -1.6
RGPD1-202ENST00000409776 ACBD3Q9H3P7 528 aa5.05□□□□□ -1.6
RGPD1-202ENST00000409776 GNL2Q13823 731 aaKnown RBP5.05□□□□□ -1.6
RGPD1-202ENST00000409776 MYH16Q9H6N6 1097 aa5.04□□□□□ -1.6
RGPD1-202ENST00000409776 ZFYVE1Q9HBF4 777 aa5.04□□□□□ -1.6
RGPD1-202ENST00000409776 KNSTRNQ9Y448 316 aa5.04□□□□□ -1.6
RGPD1-202ENST00000409776 DBN1Q16643 649 aa5.04□□□□□ -1.6
RGPD1-202ENST00000409776 CCDC144CPQ8IYA2 1237 aa5.04□□□□□ -1.6
RGPD1-202ENST00000409776 FOSBP53539 338 aa5.04□□□□□ -1.6
RGPD1-202ENST00000409776 E9PSI1 815 aa5.04□□□□□ -1.6
RGPD1-202ENST00000409776 CHMP4AQ9BY43 222 aa5.04□□□□□ -1.6
RGPD1-202ENST00000409776 FAM114A2Q9NRY5 505 aa5.04□□□□□ -1.6
RGPD1-202ENST00000409776 TPM2P07951 284 aa5.04□□□□□ -1.6
RGPD1-202ENST00000409776 ITPRIPQ8IWB1 547 aa5.04□□□□□ -1.6
RGPD1-202ENST00000409776 CCDC91Q7Z6B0 441 aa5.03□□□□□ -1.6
RGPD1-202ENST00000409776 ZNHIT6Q9NWK9 470 aaKnown RBP5.03□□□□□ -1.6
RGPD1-202ENST00000409776 DCAF8L1A6NGE4 600 aa5.03□□□□□ -1.6
RGPD1-202ENST00000409776 HSP90AB1P08238 724 aaKnown RBP5.03□□□□□ -1.6
RGPD1-202ENST00000409776 KIF3CO14782 793 aa5.03□□□□□ -1.6
RGPD1-202ENST00000409776 SARNPP82979 210 aaKnown RBP5.03□□□□□ -1.6
RGPD1-202ENST00000409776 CAVIN1Q6NZI2 390 aaKnown RBP5.03□□□□□ -1.6
RGPD1-202ENST00000409776 TRIM35Q9UPQ4 493 aa5.03□□□□□ -1.6
RGPD1-202ENST00000409776 KIAA0754O94854 1291 aa5.03□□□□□ -1.6
RGPD1-202ENST00000409776 CEP63Q96MT8 703 aa5.03□□□□□ -1.6
RGPD1-202ENST00000409776 MTERF4Q7Z6M4 381 aaKnown RBP5.02□□□□□ -1.61
RGPD1-202ENST00000409776 PPARGC1BQ86YN6 1023 aaKnown RBP5.02□□□□□ -1.61
RGPD1-202ENST00000409776 PPFIBP2Q8ND30 876 aa5.02□□□□□ -1.61
RGPD1-202ENST00000409776 TSPY2A6NKD2 308 aa5.02□□□□□ -1.61
RGPD1-202ENST00000409776 TSPY3P0CV98 308 aa5.02□□□□□ -1.61
RGPD1-202ENST00000409776 TSPY8P0CW00 308 aa5.02□□□□□ -1.61
RGPD1-202ENST00000409776 TSPY1Q01534 308 aa5.02□□□□□ -1.61
RGPD1-202ENST00000409776 DAAM2Q86T65 1068 aa5.02□□□□□ -1.61
RGPD1-202ENST00000409776 MPHOSPH6Q99547 160 aaKnown RBP5.02□□□□□ -1.61
RGPD1-202ENST00000409776 NUCB2P80303 420 aa5.02□□□□□ -1.61
RGPD1-202ENST00000409776 HSP90B2PQ58FF3 399 aa5.02□□□□□ -1.61
RGPD1-202ENST00000409776 CPSF2Q9P2I0 782 aaKnown RBP5.02□□□□□ -1.61
RGPD1-202ENST00000409776 DDX46Q7L014 1031 aaKnown RBP5.02□□□□□ -1.61
RGPD1-202ENST00000409776 PDILTQ8N807 584 aa5.02□□□□□ -1.61
RGPD1-202ENST00000409776 ZBTB12Q9Y330 459 aaPredicted RBP5.02□□□□□ -1.61
RGPD1-202ENST00000409776 AKAP17AQ02040 695 aaKnown RBP5.01□□□□□ -1.61
RGPD1-202ENST00000409776 DDX23Q9BUQ8 820 aaKnown RBP5.01□□□□□ -1.61
RGPD1-202ENST00000409776 HIRIP3Q9BW71 556 aaPredicted RBP5.01□□□□□ -1.61
RGPD1-202ENST00000409776 CGNQ9P2M7 1197 aaKnown RBP5.01□□□□□ -1.61
RGPD1-202ENST00000409776 SEPT7Q16181 437 aaKnown RBP5.01□□□□□ -1.61
RGPD1-202ENST00000409776 CFAP45Q9UL16 551 aa5.01□□□□□ -1.61
RGPD1-202ENST00000409776 CIZ1Q9ULV3 898 aaPredicted RBP5.01□□□□□ -1.61
RGPD1-202ENST00000409776 PRPF40AO75400 957 aaKnown RBP5.01□□□□□ -1.61
RGPD1-202ENST00000409776 KIF3BO15066 747 aa5.01□□□□□ -1.61
RGPD1-202ENST00000409776 TPM1P09493 284 aa5.01□□□□□ -1.61
RGPD1-202ENST00000409776 MFAP1P55081 439 aaKnown RBP5.01□□□□□ -1.61
RGPD1-202ENST00000409776 LMOD3Q0VAK6 560 aa5.01□□□□□ -1.61
RGPD1-202ENST00000409776 KIAA1211Q6ZU35 1233 aa5.01□□□□□ -1.61
RGPD1-202ENST00000409776 ZRANB2O95218 330 aaKnown RBP eCLIP5□□□□□ -1.61
RGPD1-202ENST00000409776 ATP6V1E2Q96A05 226 aa5□□□□□ -1.61
RGPD1-202ENST00000409776 CENPHQ9H3R5 247 aa5□□□□□ -1.61
RGPD1-202ENST00000409776 ANO8Q9HCE9 1232 aaPredicted RBP5□□□□□ -1.61
RGPD1-202ENST00000409776 PPM1EQ8WY54 764 aa5□□□□□ -1.61
RGPD1-202ENST00000409776 SATB2Q9UPW6 733 aa4.99□□□□□ -1.61
RGPD1-202ENST00000409776 KIF3AQ9Y496 699 aa4.99□□□□□ -1.61
RGPD1-202ENST00000409776 CT47A1Q5JQC4 288 aaPredicted RBP4.99□□□□□ -1.61
RGPD1-202ENST00000409776 TPX2Q9ULW0 747 aaKnown RBP4.99□□□□□ -1.61
RGPD1-202ENST00000409776 EIF3JO75822 258 aaKnown RBP4.99□□□□□ -1.61
RGPD1-202ENST00000409776 ITGAEP38570 1179 aa4.99□□□□□ -1.61
RGPD1-202ENST00000409776 GTF2A1P52655 376 aaPredicted RBP4.99□□□□□ -1.61
RGPD1-202ENST00000409776 CCDC173Q0VFZ6 552 aa4.99□□□□□ -1.61
RGPD1-202ENST00000409776 UBE2Q2Q8WVN8 375 aa4.99□□□□□ -1.61
RGPD1-202ENST00000409776 ALS2CR12Q96Q35 445 aa4.99□□□□□ -1.61
RGPD1-202ENST00000409776 BCL11BQ9C0K0 894 aaPredicted RBP4.99□□□□□ -1.61
RGPD1-202ENST00000409776 PPM1FP49593 454 aaPredicted RBP4.99□□□□□ -1.61
RGPD1-202ENST00000409776 GORABQ5T7V8 394 aa4.99□□□□□ -1.61
RGPD1-202ENST00000409776 MICALCLQ6ZW33 695 aa4.99□□□□□ -1.61
RGPD1-202ENST00000409776 PRPF38AQ8NAV1 312 aaKnown RBP4.99□□□□□ -1.61
RGPD1-202ENST00000409776 ZNF592Q92610 1267 aa4.99□□□□□ -1.61
RGPD1-202ENST00000409776 C10orf67Q8IYJ2 551 aa4.99□□□□□ -1.61
RGPD1-202ENST00000409776 IBSPP21815 317 aaPredicted RBP4.98□□□□□ -1.61
RGPD1-202ENST00000409776 BMS1Q14692 1282 aaKnown RBP4.98□□□□□ -1.61
RGPD1-202ENST00000409776 MAP7D1Q3KQU3 841 aa4.98□□□□□ -1.61
RGPD1-202ENST00000409776 TBC1D10BQ4KMP7 808 aaPredicted RBP4.98□□□□□ -1.61
RGPD1-202ENST00000409776 WHAMMQ8TF30 809 aa4.98□□□□□ -1.61
RGPD1-202ENST00000409776 HDAC5Q9UQL6 1122 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms