RNA–Protein interactions for RNA: ENST00000401447.1

RPA3-203, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 414 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-203ENST00000401447 FBXW7Q969H0 707 aa8.56□□□□□ -1.04
RPA3-203ENST00000401447 TYW1BQ6NUM6 668 aa8.55□□□□□ -1.04
RPA3-203ENST00000401447 ZDHHC16Q969W1 377 aa8.55□□□□□ -1.04
RPA3-203ENST00000401447 KCNH8Q96L42 1107 aa8.55□□□□□ -1.04
RPA3-203ENST00000401447 EPAS1Q99814 870 aa8.55□□□□□ -1.04
RPA3-203ENST00000401447 SMYD5Q6GMV2 418 aa8.54□□□□□ -1.04
RPA3-203ENST00000401447 PCDHGA10Q9Y5H3 936 aa8.54□□□□□ -1.04
RPA3-203ENST00000401447 TESPA1A2RU30 521 aaPredicted RBP8.53□□□□□ -1.04
RPA3-203ENST00000401447 MLLT3P42568 568 aaPredicted RBP8.53□□□□□ -1.04
RPA3-203ENST00000401447 BCANQ96GW7 911 aa8.52□□□□□ -1.05
RPA3-203ENST00000401447 HCSTQ9UBK5 93 aa8.52□□□□□ -1.05
RPA3-203ENST00000401447 MAP3K7O43318 606 aa8.51□□□□□ -1.05
RPA3-203ENST00000401447 EN1Q05925 392 aaPredicted RBP8.5□□□□□ -1.05
RPA3-203ENST00000401447 RBM33Q96EV2 1170 aaKnown RBP8.5□□□□□ -1.05
RPA3-203ENST00000401447 BCL2L12Q9HB09 334 aa8.5□□□□□ -1.05
RPA3-203ENST00000401447 PTPREP23469 700 aa8.49□□□□□ -1.05
RPA3-203ENST00000401447 ADAM33Q9BZ11 813 aa8.49□□□□□ -1.05
RPA3-203ENST00000401447 OSBPP22059 807 aa8.48□□□□□ -1.05
RPA3-203ENST00000401447 KCNK17Q96T54 332 aa8.48□□□□□ -1.05
RPA3-203ENST00000401447 SLC4A5Q9BY07 1137 aa8.46□□□□□ -1.06
RPA3-203ENST00000401447 PLA2G2EQ9NZK7 142 aa8.46□□□□□ -1.06
RPA3-203ENST00000401447 VPS9D1Q9Y2B5 631 aa8.46□□□□□ -1.06
RPA3-203ENST00000401447 C6orf132Q5T0Z8 1188 aa8.44□□□□□ -1.06
RPA3-203ENST00000401447 PPP1R3GB7ZBB8 358 aa8.43□□□□□ -1.06
RPA3-203ENST00000401447 BHMG1C9JSJ3 638 aaPredicted RBP8.43□□□□□ -1.06
RPA3-203ENST00000401447 TSR1Q2NL82 804 aaKnown RBP8.43□□□□□ -1.06
RPA3-203ENST00000401447 NUTM2FA1L443 756 aa8.42□□□□□ -1.06
RPA3-203ENST00000401447 PRIM1P49642 420 aaKnown RBP8.42□□□□□ -1.06
RPA3-203ENST00000401447 CERKQ8TCT0 537 aa8.42□□□□□ -1.06
RPA3-203ENST00000401447 KCTD12Q96CX2 325 aaKnown RBP8.42□□□□□ -1.06
RPA3-203ENST00000401447 RBM26Q5T8P6 1007 aaKnown RBP8.41□□□□□ -1.06
RPA3-203ENST00000401447 GPIHBP1Q8IV16 184 aa8.41□□□□□ -1.06
RPA3-203ENST00000401447 ZBED2Q9BTP6 218 aa8.4□□□□□ -1.06
RPA3-203ENST00000401447 CDHR5Q9HBB8 845 aa8.4□□□□□ -1.06
RPA3-203ENST00000401447 LMOD2Q6P5Q4 547 aa8.39□□□□□ -1.07
RPA3-203ENST00000401447 COL9A1P20849 921 aa8.38□□□□□ -1.07
RPA3-203ENST00000401447 STAC3Q96MF2 364 aa8.38□□□□□ -1.07
RPA3-203ENST00000401447 FCHSD2O94868 740 aa8.37□□□□□ -1.07
RPA3-203ENST00000401447 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.37□□□□□ -1.07
RPA3-203ENST00000401447 PTGDRQ13258 359 aa8.35□□□□□ -1.07
RPA3-203ENST00000401447 RBM27Q9P2N5 1060 aaKnown RBP8.35□□□□□ -1.07
RPA3-203ENST00000401447 PRSS12P56730 875 aa8.34□□□□□ -1.07
RPA3-203ENST00000401447 HIC1Q14526 733 aa8.34□□□□□ -1.07
RPA3-203ENST00000401447 CDCA7LQ96GN5 454 aa8.34□□□□□ -1.07
RPA3-203ENST00000401447 TRIM6-TRIM34B2RNG4 842 aa8.33□□□□□ -1.08
RPA3-203ENST00000401447 PROX2Q3B8N5 592 aa8.33□□□□□ -1.08
RPA3-203ENST00000401447 THSD4Q6ZMP0 1018 aa8.33□□□□□ -1.08
RPA3-203ENST00000401447 NBPF3Q9H094 633 aa8.33□□□□□ -1.08
RPA3-203ENST00000401447 PTPN5P54829 565 aa8.32□□□□□ -1.08
RPA3-203ENST00000401447 NPDC1Q9NQX5 325 aaPredicted RBP8.32□□□□□ -1.08
RPA3-203ENST00000401447 NBPF26B4DH59 902 aa8.31□□□□□ -1.08
RPA3-203ENST00000401447 GNPATO15228 680 aa8.31□□□□□ -1.08
RPA3-203ENST00000401447 IFFO2Q5TF58 517 aa8.31□□□□□ -1.08
RPA3-203ENST00000401447 PADI6Q6TGC4 694 aa8.31□□□□□ -1.08
RPA3-203ENST00000401447 PACS2Q86VP3 889 aa8.31□□□□□ -1.08
RPA3-203ENST00000401447 MRPL50Q8N5N7 158 aaKnown RBP8.31□□□□□ -1.08
RPA3-203ENST00000401447 GPR37O15354 613 aa8.3□□□□□ -1.08
RPA3-203ENST00000401447 ONECUT3O60422 494 aaPredicted RBP8.3□□□□□ -1.08
RPA3-203ENST00000401447 RABGEF1Q9UJ41 708 aa8.3□□□□□ -1.08
RPA3-203ENST00000401447 WNT2BQ93097 391 aa8.29□□□□□ -1.08
RPA3-203ENST00000401447 KIAA1468Q9P260 1216 aa8.29□□□□□ -1.08
RPA3-203ENST00000401447 TSKSQ9UJT2 592 aa8.29□□□□□ -1.08
RPA3-203ENST00000401447 GOLGA8CPA6NN73 597 aa8.26□□□□□ -1.09
RPA3-203ENST00000401447 PNMA3Q9UL41 463 aa8.26□□□□□ -1.09
RPA3-203ENST00000401447 TTC13Q8NBP0 860 aa8.25□□□□□ -1.09
RPA3-203ENST00000401447 ZC3H15Q8WU90 426 aaKnown RBP8.25□□□□□ -1.09
RPA3-203ENST00000401447 SEPT9Q9UHD8 586 aaPredicted RBP8.25□□□□□ -1.09
RPA3-203ENST00000401447 MAP2K5Q13163 448 aa8.24□□□□□ -1.09
RPA3-203ENST00000401447 LAPTM4BQ86VI4 370 aa8.24□□□□□ -1.09
RPA3-203ENST00000401447 FAM198AQ9UFP1 575 aa8.24□□□□□ -1.09
RPA3-203ENST00000401447 FAM98CQ17RN3 349 aaKnown RBP8.23□□□□□ -1.09
RPA3-203ENST00000401447 NUDT18Q6ZVK8 323 aa8.23□□□□□ -1.09
RPA3-203ENST00000401447 RBM46Q8TBY0 533 aaKnown RBP8.23□□□□□ -1.09
RPA3-203ENST00000401447 TATDN2Q93075 761 aa8.23□□□□□ -1.09
RPA3-203ENST00000401447 RGS20O76081 388 aa8.22□□□□□ -1.09
RPA3-203ENST00000401447 FECHP22830 423 aa8.22□□□□□ -1.09
RPA3-203ENST00000401447 KRI1Q8N9T8 703 aaKnown RBP8.22□□□□□ -1.09
RPA3-203ENST00000401447 ADGRG1Q9Y653 693 aa8.22□□□□□ -1.09
RPA3-203ENST00000401447 SMAPO00193 183 aa8.21□□□□□ -1.1
RPA3-203ENST00000401447 ZMYND10O75800 440 aa8.21□□□□□ -1.1
RPA3-203ENST00000401447 OATP04181 439 aa8.21□□□□□ -1.1
RPA3-203ENST00000401447 A0A0G2JS52 829 aa8.2□□□□□ -1.1
RPA3-203ENST00000401447 FAM161AQ3B820 660 aa8.2□□□□□ -1.1
RPA3-203ENST00000401447 ANKK1Q8NFD2 765 aa8.2□□□□□ -1.1
RPA3-203ENST00000401447 MINK1Q8N4C8 1332 aaPredicted RBP8.2□□□□□ -1.1
RPA3-203ENST00000401447 SOWAHBA6NEL2 793 aa8.19□□□□□ -1.1
RPA3-203ENST00000401447 BARGINQ6ZT62 677 aa8.19□□□□□ -1.1
RPA3-203ENST00000401447 ITGBL1O95965 494 aaPredicted RBP8.18□□□□□ -1.1
RPA3-203ENST00000401447 DNAJB2P25686 324 aa8.18□□□□□ -1.1
RPA3-203ENST00000401447 SLC4A3P48751 1232 aa8.18□□□□□ -1.1
RPA3-203ENST00000401447 HDGFP51858 240 aaKnown RBP8.18□□□□□ -1.1
RPA3-203ENST00000401447 METTL3Q86U44 580 aaKnown RBP8.18□□□□□ -1.1
RPA3-203ENST00000401447 CCDC102AQ96A19 550 aa8.18□□□□□ -1.1
RPA3-203ENST00000401447 ZFRQ96KR1 1074 aaKnown RBP8.18□□□□□ -1.1
RPA3-203ENST00000401447 C3orf80F5H4A9 247 aa8.17□□□□□ -1.1
RPA3-203ENST00000401447 IRF6O14896 467 aa8.17□□□□□ -1.1
RPA3-203ENST00000401447 BCAMP50895 628 aa8.17□□□□□ -1.1
RPA3-203ENST00000401447 PXYLP1Q8TE99 480 aa8.17□□□□□ -1.1
RPA3-203ENST00000401447 EYA1Q99502 592 aa8.17□□□□□ -1.1
RPA3-203ENST00000401447 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms