RNA–Protein interactions for RNA: ENST00000399408.6

ABCC1-201, Transcript of ATP binding cassette subfamily C member 1, humanhuman

TSL 5 BASIC

Gene ABCC1, Length 6,594 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC1-201ENST00000399408 KIF21BO75037 1637 aa19.25■□□□□ 0.67
ABCC1-201ENST00000399408 NRDCO43847 1150 aa19.25■□□□□ 0.67
ABCC1-201ENST00000399408 DEKP35659 375 aaKnown RBP19.24■□□□□ 0.67
ABCC1-201ENST00000399408 GBP4Q96PP9 640 aa19.24■□□□□ 0.67
ABCC1-201ENST00000399408 CUX1P39880 1505 aa19.24■□□□□ 0.67
ABCC1-201ENST00000399408 AMPHP49418 695 aa19.23■□□□□ 0.67
ABCC1-201ENST00000399408 HDAC5Q9UQL6 1122 aa19.22■□□□□ 0.67
ABCC1-201ENST00000399408 SLKQ9H2G2 1235 aaPredicted RBP19.22■□□□□ 0.67
ABCC1-201ENST00000399408 CGNL1Q0VF96 1302 aa19.22■□□□□ 0.67
ABCC1-201ENST00000399408 EVC2Q86UK5 1308 aa19.22■□□□□ 0.67
ABCC1-201ENST00000399408 PTMSP20962 102 aa19.22■□□□□ 0.67
ABCC1-201ENST00000399408 MFAP1P55081 439 aaKnown RBP19.22■□□□□ 0.67
ABCC1-201ENST00000399408 ZBED9Q6R2W3 1325 aa19.21■□□□□ 0.67
ABCC1-201ENST00000399408 RRP7AQ9Y3A4 280 aaKnown RBP19.21■□□□□ 0.67
ABCC1-201ENST00000399408 IPO9Q96P70 1041 aaKnown RBP19.2■□□□□ 0.66
ABCC1-201ENST00000399408 LRRC9Q6ZRR7 1453 aa19.19■□□□□ 0.66
ABCC1-201ENST00000399408 ZNF330Q9Y3S2 320 aaPredicted RBP19.19■□□□□ 0.66
ABCC1-201ENST00000399408 SLC4A10Q6U841 1118 aa19.18■□□□□ 0.66
ABCC1-201ENST00000399408 NUTM2FA1L443 756 aa19.17■□□□□ 0.66
ABCC1-201ENST00000399408 E9PSI1 815 aa19.17■□□□□ 0.66
ABCC1-201ENST00000399408 ZNF644Q9H582 1327 aaPredicted RBP19.16■□□□□ 0.66
ABCC1-201ENST00000399408 CASKIN1Q8WXD9 1431 aa19.16■□□□□ 0.66
ABCC1-201ENST00000399408 TULP1O00294 542 aaPredicted RBP19.16■□□□□ 0.66
ABCC1-201ENST00000399408 GPATCH3Q96I76 525 aa19.16■□□□□ 0.66
ABCC1-201ENST00000399408 MSNP26038 577 aaKnown RBP19.15■□□□□ 0.66
ABCC1-201ENST00000399408 COG3Q96JB2 828 aa19.14■□□□□ 0.66
ABCC1-201ENST00000399408 LTV1Q96GA3 475 aaPredicted RBP19.14■□□□□ 0.65
ABCC1-201ENST00000399408 RRP1P56182 461 aaKnown RBP19.14■□□□□ 0.65
ABCC1-201ENST00000399408 TRIM6-TRIM34B2RNG4 842 aa19.14■□□□□ 0.65
ABCC1-201ENST00000399408 GNL2Q13823 731 aaKnown RBP19.13■□□□□ 0.65
ABCC1-201ENST00000399408 CENPQQ7L2Z9 268 aaPredicted RBP19.13■□□□□ 0.65
ABCC1-201ENST00000399408 FYCO1Q9BQS8 1478 aa19.13■□□□□ 0.65
ABCC1-201ENST00000399408 AQRO60306 1485 aaKnown RBP eCLIP19.13■□□□□ 0.654e-7■■■■■ 27.9
ABCC1-201ENST00000399408 NCOA2Q15596 1464 aa19.12■□□□□ 0.65
ABCC1-201ENST00000399408 CHAF1AQ13111 956 aaPredicted RBP19.12■□□□□ 0.65
ABCC1-201ENST00000399408 OSCARQ8IYS5 282 aa19.12■□□□□ 0.65
ABCC1-201ENST00000399408 MINK1Q8N4C8 1332 aaPredicted RBP19.12■□□□□ 0.65
ABCC1-201ENST00000399408 STAC3Q96MF2 364 aa19.11■□□□□ 0.65
ABCC1-201ENST00000399408 ERICH3Q5RHP9 1530 aa19.11■□□□□ 0.65
ABCC1-201ENST00000399408 GORABQ5T7V8 394 aa19.1■□□□□ 0.65
ABCC1-201ENST00000399408 ZKSCAN2Q63HK3 967 aa19.1■□□□□ 0.65
ABCC1-201ENST00000399408 CCDC7Q96M83 1385 aa19.1■□□□□ 0.65
ABCC1-201ENST00000399408 CHMP3Q9Y3E7 222 aa19.1■□□□□ 0.65
ABCC1-201ENST00000399408 ANKRD50Q9ULJ7 1429 aa19.1■□□□□ 0.65
ABCC1-201ENST00000399408 PLIN1O60240 522 aa19.1■□□□□ 0.65
ABCC1-201ENST00000399408 DRC7Q8IY82 874 aa19.1■□□□□ 0.65
ABCC1-201ENST00000399408 EXOC6Q8TAG9 804 aa19.09■□□□□ 0.65
ABCC1-201ENST00000399408 APAF1O14727 1248 aa19.09■□□□□ 0.65
ABCC1-201ENST00000399408 HTATSF1O43719 755 aaKnown RBP19.09■□□□□ 0.65
ABCC1-201ENST00000399408 BCL2L13Q9BXK5 485 aa19.09■□□□□ 0.65
ABCC1-201ENST00000399408 GZF1Q9H116 711 aaPredicted RBP19.09■□□□□ 0.65
ABCC1-201ENST00000399408 NGEFQ8N5V2 710 aa19.09■□□□□ 0.65
ABCC1-201ENST00000399408 KIF7Q2M1P5 1343 aa19.08■□□□□ 0.65
ABCC1-201ENST00000399408 CYB5RLQ6IPT4 315 aa19.07■□□□□ 0.64
ABCC1-201ENST00000399408 SYAP1Q96A49 352 aaPredicted RBP19.07■□□□□ 0.64
ABCC1-201ENST00000399408 ELL2O00472 640 aaPredicted RBP19.07■□□□□ 0.64
ABCC1-201ENST00000399408 TAF7LQ5H9L4 462 aa19.06■□□□□ 0.64
ABCC1-201ENST00000399408 CRBNQ96SW2 442 aa19.06■□□□□ 0.64
ABCC1-201ENST00000399408 GRIN2BQ13224 1484 aa19.05■□□□□ 0.64
ABCC1-201ENST00000399408 ARAP1Q96P48 1450 aa19.05■□□□□ 0.64
ABCC1-201ENST00000399408 FAM161AQ3B820 660 aa19.05■□□□□ 0.64
ABCC1-201ENST00000399408 CFTRP13569 1480 aa19.05■□□□□ 0.64
ABCC1-201ENST00000399408 PDE4AP27815 886 aa19.04■□□□□ 0.64
ABCC1-201ENST00000399408 MIA2Q96PC5 1412 aa19.04■□□□□ 0.64
ABCC1-201ENST00000399408 ISY1Q9ULR0 285 aaKnown RBP19.04■□□□□ 0.64
ABCC1-201ENST00000399408 DIAPH1O60610 1272 aaKnown RBP19.04■□□□□ 0.64
ABCC1-201ENST00000399408 CNTLNQ9NXG0 1405 aa19.03■□□□□ 0.64
ABCC1-201ENST00000399408 COG6Q9Y2V7 657 aa19.03■□□□□ 0.64
ABCC1-201ENST00000399408 SYNJ1O43426 1573 aa19.02■□□□□ 0.64
ABCC1-201ENST00000399408 ST18O60284 1047 aa19.02■□□□□ 0.63
ABCC1-201ENST00000399408 RRBP1Q9P2E9 1410 aaKnown RBP19.02■□□□□ 0.63
ABCC1-201ENST00000399408 CCDC9Q9Y3X0 531 aaKnown RBP19.01■□□□□ 0.63
ABCC1-201ENST00000399408 PRDM2Q13029 1718 aa19■□□□□ 0.63
ABCC1-201ENST00000399408 GOLGA6L3A6NEY3 463 aa19■□□□□ 0.63
ABCC1-201ENST00000399408 HSP90B1P14625 803 aaKnown RBP19■□□□□ 0.63
ABCC1-201ENST00000399408 ANKRD45Q5TZF3 282 aa19■□□□□ 0.63
ABCC1-201ENST00000399408 C1orf141Q5JVX7 400 aa18.99■□□□□ 0.63
ABCC1-201ENST00000399408 FOXD4L1Q9NU39 408 aa18.99■□□□□ 0.63
ABCC1-201ENST00000399408 KIAA2012Q0VF49 1180 aa18.98■□□□□ 0.63
ABCC1-201ENST00000399408 NOL8Q76FK4 1167 aaKnown RBP18.98■□□□□ 0.63
ABCC1-201ENST00000399408 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.98■□□□□ 0.63
ABCC1-201ENST00000399408 DDX19BQ9UMR2 479 aa18.98■□□□□ 0.63
ABCC1-201ENST00000399408 RUNDC1Q96C34 613 aa18.97■□□□□ 0.63
ABCC1-201ENST00000399408 CSPP1Q1MSJ5 1256 aa18.97■□□□□ 0.63
ABCC1-201ENST00000399408 RIPK4P57078 832 aa18.97■□□□□ 0.63
ABCC1-201ENST00000399408 TEFQ10587 303 aa18.97■□□□□ 0.63
ABCC1-201ENST00000399408 EFCAB5A4FU69 1503 aa18.95■□□□□ 0.62
ABCC1-201ENST00000399408 DZIP1LQ8IYY4 767 aaKnown RBP18.94■□□□□ 0.62
ABCC1-201ENST00000399408 API5Q9BZZ5 524 aaKnown RBP18.94■□□□□ 0.62
ABCC1-201ENST00000399408 WASHC2AQ641Q2 1341 aa18.94■□□□□ 0.62
ABCC1-201ENST00000399408 PRXQ9BXM0 1461 aa18.94■□□□□ 0.62
ABCC1-201ENST00000399408 SYNJ2O15056 1496 aa18.94■□□□□ 0.62
ABCC1-201ENST00000399408 KIF16BQ96L93 1317 aa18.93■□□□□ 0.62
ABCC1-201ENST00000399408 ARHGAP5Q13017 1502 aa18.93■□□□□ 0.62
ABCC1-201ENST00000399408 FAM69CQ0P6D2 419 aa18.93■□□□□ 0.62
ABCC1-201ENST00000399408 RILPL2Q969X0 211 aa18.92■□□□□ 0.62
ABCC1-201ENST00000399408 TMX4Q9H1E5 349 aaPredicted RBP18.92■□□□□ 0.62
ABCC1-201ENST00000399408 BRD4O60885 1362 aaPredicted RBP18.91■□□□□ 0.62
ABCC1-201ENST00000399408 USP35Q9P2H5 1018 aa18.91■□□□□ 0.62
ABCC1-201ENST00000399408 DDX11L8A8MPP1 907 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms