RNA–Protein interactions for RNA: ENST00000399352.5

ITSN1-209, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-209ENST00000399352 KANK1Q14678 1352 aa19.94■□□□□ 0.78
ITSN1-209ENST00000399352 BECN2A8MW95 431 aa19.93■□□□□ 0.78
ITSN1-209ENST00000399352 PES1O00541 588 aaKnown RBP19.93■□□□□ 0.78
ITSN1-209ENST00000399352 RRP1P56182 461 aaKnown RBP19.92■□□□□ 0.78
ITSN1-209ENST00000399352 RRP7AQ9Y3A4 280 aaKnown RBP19.92■□□□□ 0.78
ITSN1-209ENST00000399352 L3MBTL2Q969R5 705 aa19.92■□□□□ 0.78
ITSN1-209ENST00000399352 PATL2C9JE40 543 aaKnown RBP19.92■□□□□ 0.78
ITSN1-209ENST00000399352 SOGA1O94964 1423 aa19.91■□□□□ 0.78
ITSN1-209ENST00000399352 FAM43AQ8N2R8 423 aa19.91■□□□□ 0.78
ITSN1-209ENST00000399352 ARHGAP35Q9NRY4 1499 aa19.91■□□□□ 0.78
ITSN1-209ENST00000399352 ANKRD45Q5TZF3 282 aa19.9■□□□□ 0.78
ITSN1-209ENST00000399352 VPS8Q8N3P4 1428 aa19.9■□□□□ 0.78
ITSN1-209ENST00000399352 H3BQV1 296 aa19.89■□□□□ 0.77
ITSN1-209ENST00000399352 IFFO2Q5TF58 517 aa19.89■□□□□ 0.77
ITSN1-209ENST00000399352 RILPL2Q969X0 211 aa19.89■□□□□ 0.77
ITSN1-209ENST00000399352 GPS2Q13227 327 aa19.89■□□□□ 0.77
ITSN1-209ENST00000399352 SPAG9O60271 1321 aaKnown RBP19.88■□□□□ 0.77
ITSN1-209ENST00000399352 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.87■□□□□ 0.77
ITSN1-209ENST00000399352 COG6Q9Y2V7 657 aa19.87■□□□□ 0.77
ITSN1-209ENST00000399352 KIF3AQ9Y496 699 aa19.87■□□□□ 0.77
ITSN1-209ENST00000399352 TOMM22Q9NS69 142 aa19.86■□□□□ 0.77
ITSN1-209ENST00000399352 ATP6V1DQ9Y5K8 247 aa19.86■□□□□ 0.77
ITSN1-209ENST00000399352 TPD52L1Q16890 204 aaPredicted RBP19.86■□□□□ 0.77
ITSN1-209ENST00000399352 ANO8Q9HCE9 1232 aaPredicted RBP19.85■□□□□ 0.77
ITSN1-209ENST00000399352 PAK3O75914 559 aaPredicted RBP19.85■□□□□ 0.77
ITSN1-209ENST00000399352 MLECQ14165 292 aa19.85■□□□□ 0.77
ITSN1-209ENST00000399352 CEP89Q96ST8 783 aa19.85■□□□□ 0.77
ITSN1-209ENST00000399352 FAM184AQ8NB25 1140 aa19.84■□□□□ 0.77
ITSN1-209ENST00000399352 CHMP5Q9NZZ3 219 aa19.84■□□□□ 0.77
ITSN1-209ENST00000399352 ELL2O00472 640 aaPredicted RBP19.84■□□□□ 0.77
ITSN1-209ENST00000399352 TAF7LQ5H9L4 462 aa19.84■□□□□ 0.77
ITSN1-209ENST00000399352 NUP155O75694 1391 aa19.83■□□□□ 0.77
ITSN1-209ENST00000399352 GGT6Q6P531 493 aa19.83■□□□□ 0.77
ITSN1-209ENST00000399352 PRM3Q9NNZ6 103 aa19.83■□□□□ 0.77
ITSN1-209ENST00000399352 MYBBP1AQ9BQG0 1328 aaKnown RBP19.83■□□□□ 0.76
ITSN1-209ENST00000399352 NFKBIBQ15653 356 aa19.82■□□□□ 0.76
ITSN1-209ENST00000399352 TSR1Q2NL82 804 aaKnown RBP19.82■□□□□ 0.76
ITSN1-209ENST00000399352 ZBED9Q6R2W3 1325 aa19.82■□□□□ 0.76
ITSN1-209ENST00000399352 TEX35Q5T0J7 233 aa19.82■□□□□ 0.76
ITSN1-209ENST00000399352 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.82■□□□□ 0.76
ITSN1-209ENST00000399352 BCL11BQ9C0K0 894 aaPredicted RBP19.81■□□□□ 0.76
ITSN1-209ENST00000399352 HOMER1Q86YM7 354 aa19.81■□□□□ 0.76
ITSN1-209ENST00000399352 R3HCC1Q9Y3T6 440 aaKnown RBP19.81■□□□□ 0.76
ITSN1-209ENST00000399352 MCTP1Q6DN14 999 aa19.8■□□□□ 0.76
ITSN1-209ENST00000399352 PRKRIP1Q9H875 184 aaPredicted RBP19.8■□□□□ 0.76
ITSN1-209ENST00000399352 HDAC5Q9UQL6 1122 aa19.79■□□□□ 0.76
ITSN1-209ENST00000399352 KIF15Q9NS87 1388 aa19.79■□□□□ 0.76
ITSN1-209ENST00000399352 CARMIL1Q5VZK9 1371 aa19.79■□□□□ 0.76
ITSN1-209ENST00000399352 PHLDB1Q86UU1 1377 aa19.79■□□□□ 0.76
ITSN1-209ENST00000399352 CCDC9Q9Y3X0 531 aaKnown RBP19.79■□□□□ 0.76
ITSN1-209ENST00000399352 ZKSCAN2Q63HK3 967 aa19.78■□□□□ 0.76
ITSN1-209ENST00000399352 TPM1P09493 284 aa19.78■□□□□ 0.76
ITSN1-209ENST00000399352 CSB-PGBD3P0DP91 1061 aa19.78■□□□□ 0.76
ITSN1-209ENST00000399352 HDGFP51858 240 aaKnown RBP19.78■□□□□ 0.76
ITSN1-209ENST00000399352 CCDC70Q6NSX1 233 aa19.77■□□□□ 0.76
ITSN1-209ENST00000399352 EIF4G1Q04637 1599 aaKnown RBP19.77■□□□□ 0.76
ITSN1-209ENST00000399352 CGNL1Q0VF96 1302 aa19.77■□□□□ 0.76
ITSN1-209ENST00000399352 CHMP4AQ9BY43 222 aa19.77■□□□□ 0.75
ITSN1-209ENST00000399352 BRPF3Q9ULD4 1205 aa19.77■□□□□ 0.75
ITSN1-209ENST00000399352 FMN1Q68DA7 1419 aa19.75■□□□□ 0.75
ITSN1-209ENST00000399352 EIF3AQ14152 1382 aaKnown RBP19.74■□□□□ 0.75
ITSN1-209ENST00000399352 MARCH6O60337 910 aa19.74■□□□□ 0.75
ITSN1-209ENST00000399352 IFT57Q9NWB7 429 aa19.74■□□□□ 0.75
ITSN1-209ENST00000399352 PANK3Q9H999 370 aa19.74■□□□□ 0.75
ITSN1-209ENST00000399352 E9PSI1 815 aa19.74■□□□□ 0.75
ITSN1-209ENST00000399352 LMOD3Q0VAK6 560 aa19.74■□□□□ 0.75
ITSN1-209ENST00000399352 IL27Q8NEV9 243 aa19.74■□□□□ 0.75
ITSN1-209ENST00000399352 ST20-MTHFSA0A0A6YYL1 179 aa19.73■□□□□ 0.75
ITSN1-209ENST00000399352 BICD2Q8TD16 824 aa19.73■□□□□ 0.75
ITSN1-209ENST00000399352 TERF2IPQ9NYB0 399 aa19.73■□□□□ 0.75
ITSN1-209ENST00000399352 PKNOX2Q96KN3 472 aa19.73■□□□□ 0.75
ITSN1-209ENST00000399352 FBXW7Q969H0 707 aa19.72■□□□□ 0.75
ITSN1-209ENST00000399352 REC8O95072 547 aa19.71■□□□□ 0.75
ITSN1-209ENST00000399352 CALRP27797 417 aaKnown RBP19.71■□□□□ 0.75
ITSN1-209ENST00000399352 DIAPH3Q9NSV4 1193 aa19.71■□□□□ 0.75
ITSN1-209ENST00000399352 VPS53Q5VIR6 699 aa19.7■□□□□ 0.74
ITSN1-209ENST00000399352 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.7■□□□□ 0.74
ITSN1-209ENST00000399352 MRE11P49959 708 aa19.7■□□□□ 0.74
ITSN1-209ENST00000399352 NASPP49321 788 aaPredicted RBP19.69■□□□□ 0.74
ITSN1-209ENST00000399352 APAF1O14727 1248 aa19.69■□□□□ 0.74
ITSN1-209ENST00000399352 IPO7O95373 1038 aaKnown RBP19.69■□□□□ 0.74
ITSN1-209ENST00000399352 CUX2O14529 1486 aa19.69■□□□□ 0.74
ITSN1-209ENST00000399352 PCMTD1Q96MG8 357 aaPredicted RBP19.69■□□□□ 0.74
ITSN1-209ENST00000399352 VPS37CA5D8V6 355 aaPredicted RBP19.69■□□□□ 0.74
ITSN1-209ENST00000399352 RNF214Q8ND24 703 aa19.69■□□□□ 0.74
ITSN1-209ENST00000399352 MNS1Q8NEH6 495 aa19.69■□□□□ 0.74
ITSN1-209ENST00000399352 WWC1Q8IX03 1113 aa19.68■□□□□ 0.74
ITSN1-209ENST00000399352 NUTM2DQ5VT03 806 aaPredicted RBP19.68■□□□□ 0.74
ITSN1-209ENST00000399352 LTV1Q96GA3 475 aaPredicted RBP19.68■□□□□ 0.74
ITSN1-209ENST00000399352 TPM2P07951 284 aa19.67■□□□□ 0.74
ITSN1-209ENST00000399352 ARGLU1Q9NWB6 273 aaPredicted RBP19.67■□□□□ 0.74
ITSN1-209ENST00000399352 ANO2Q9NQ90 1003 aa19.67■□□□□ 0.74
ITSN1-209ENST00000399352 DHX57Q6P158 1386 aaKnown RBP19.66■□□□□ 0.74
ITSN1-209ENST00000399352 NUCB2P80303 420 aa19.66■□□□□ 0.74
ITSN1-209ENST00000399352 C22orf23Q9BZE7 217 aa19.66■□□□□ 0.74
ITSN1-209ENST00000399352 RBM10P98175 930 aaKnown RBP19.66■□□□□ 0.74
ITSN1-209ENST00000399352 ANKRD30AQ9BXX3 1397 aa19.65■□□□□ 0.74
ITSN1-209ENST00000399352 ZKSCAN1P17029 563 aaPredicted RBP19.65■□□□□ 0.74
ITSN1-209ENST00000399352 RB1CC1Q8TDY2 1594 aa19.65■□□□□ 0.74
ITSN1-209ENST00000399352 AKAP17AQ02040 695 aaKnown RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms