RNA–Protein interactions for RNA: ENST00000396987.7

GPAT4-201, Transcript of glycerol-3-phosphate acyltransferase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPAT4, Length 6,298 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPAT4-201ENST00000396987 CCDC175P0C221 793 aa17.71■□□□□ 0.42
GPAT4-201ENST00000396987 AXDND1Q5T1B0 1012 aaPredicted RBP17.71■□□□□ 0.42
GPAT4-201ENST00000396987 DCAF8Q5TAQ9 597 aa17.71■□□□□ 0.42
GPAT4-201ENST00000396987 AEBP1Q8IUX7 1158 aa17.71■□□□□ 0.42
GPAT4-201ENST00000396987 RRP7BPQ9NSQ0 103 aa17.71■□□□□ 0.42
GPAT4-201ENST00000396987 CLGNO14967 610 aa17.7■□□□□ 0.42
GPAT4-201ENST00000396987 ARGLU1Q9NWB6 273 aaPredicted RBP17.7■□□□□ 0.42
GPAT4-201ENST00000396987 CCDC66A2RUB6 948 aa17.7■□□□□ 0.42
GPAT4-201ENST00000396987 WRNQ14191 1432 aaPredicted RBP eCLIP17.7■□□□□ 0.42
GPAT4-201ENST00000396987 RALBP1Q15311 655 aa17.69■□□□□ 0.42
GPAT4-201ENST00000396987 ENOX2Q16206 610 aaKnown RBP17.69■□□□□ 0.42
GPAT4-201ENST00000396987 B4GALNT3Q6L9W6 998 aa17.69■□□□□ 0.42
GPAT4-201ENST00000396987 MNS1Q8NEH6 495 aa17.68■□□□□ 0.42
GPAT4-201ENST00000396987 TICAM2Q86XR7 235 aa17.68■□□□□ 0.42
GPAT4-201ENST00000396987 ZNF330Q9Y3S2 320 aaPredicted RBP17.67■□□□□ 0.42
GPAT4-201ENST00000396987 GOLGA6L7A0A1B0GV03 622 aa17.67■□□□□ 0.42
GPAT4-201ENST00000396987 GOLGA3Q08378 1498 aa17.66■□□□□ 0.42
GPAT4-201ENST00000396987 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.66■□□□□ 0.42
GPAT4-201ENST00000396987 IBSPP21815 317 aaPredicted RBP17.66■□□□□ 0.42
GPAT4-201ENST00000396987 GORABQ5T7V8 394 aa17.66■□□□□ 0.42
GPAT4-201ENST00000396987 CENPHQ9H3R5 247 aa17.66■□□□□ 0.42
GPAT4-201ENST00000396987 CFAP44Q96MT7 982 aa17.66■□□□□ 0.42
GPAT4-201ENST00000396987 ERCC6Q03468 1493 aa17.66■□□□□ 0.42
GPAT4-201ENST00000396987 LEKR1Q6ZMV7 388 aa17.65■□□□□ 0.42
GPAT4-201ENST00000396987 MS4A1P11836 297 aa17.65■□□□□ 0.42
GPAT4-201ENST00000396987 CCDC173Q0VFZ6 552 aa17.65■□□□□ 0.42
GPAT4-201ENST00000396987 CAGE1Q8TC20 777 aa17.64■□□□□ 0.41
GPAT4-201ENST00000396987 SEPT7Q16181 437 aaKnown RBP17.64■□□□□ 0.41
GPAT4-201ENST00000396987 CEP63Q96MT8 703 aa17.63■□□□□ 0.41
GPAT4-201ENST00000396987 EEA1Q15075 1411 aa17.63■□□□□ 0.41
GPAT4-201ENST00000396987 KIAA0754O94854 1291 aa17.63■□□□□ 0.41
GPAT4-201ENST00000396987 EZRP15311 586 aaKnown RBP17.62■□□□□ 0.41
GPAT4-201ENST00000396987 KIF27Q86VH2 1401 aa17.62■□□□□ 0.41
GPAT4-201ENST00000396987 RAD21O60216 631 aa17.62■□□□□ 0.41
GPAT4-201ENST00000396987 FOXD4L6Q3SYB3 417 aaPredicted RBP17.62■□□□□ 0.41
GPAT4-201ENST00000396987 FOXD4L3Q6VB84 417 aaPredicted RBP17.62■□□□□ 0.41
GPAT4-201ENST00000396987 SOGA3Q5TF21 947 aa17.61■□□□□ 0.41
GPAT4-201ENST00000396987 DDX23Q9BUQ8 820 aaKnown RBP17.61■□□□□ 0.41
GPAT4-201ENST00000396987 SPATA24Q86W54 205 aa17.61■□□□□ 0.41
GPAT4-201ENST00000396987 TSHZ2Q9NRE2 1034 aa17.6■□□□□ 0.41
GPAT4-201ENST00000396987 CEP162Q5TB80 1403 aa17.6■□□□□ 0.41
GPAT4-201ENST00000396987 VGFO15240 615 aaPredicted RBP17.6■□□□□ 0.41
GPAT4-201ENST00000396987 PUS7Q96PZ0 661 aaKnown RBP17.6■□□□□ 0.41
GPAT4-201ENST00000396987 H3BQV1 296 aa17.6■□□□□ 0.41
GPAT4-201ENST00000396987 U2SURPO15042 1029 aaKnown RBP17.6■□□□□ 0.41
GPAT4-201ENST00000396987 IFFO2Q5TF58 517 aa17.6■□□□□ 0.41
GPAT4-201ENST00000396987 ANKRD20A12PQ8NF67 263 aa17.59■□□□□ 0.41
GPAT4-201ENST00000396987 TNNT1P13805 278 aa17.59■□□□□ 0.41
GPAT4-201ENST00000396987 PPM1FP49593 454 aaPredicted RBP17.59■□□□□ 0.41
GPAT4-201ENST00000396987 ANKRD18AQ8IVF6 992 aa17.58■□□□□ 0.41
GPAT4-201ENST00000396987 DEF6Q9H4E7 631 aa17.58■□□□□ 0.41
GPAT4-201ENST00000396987 CHMP3Q9Y3E7 222 aa17.58■□□□□ 0.41
GPAT4-201ENST00000396987 TTLL5Q6EMB2 1281 aa17.58■□□□□ 0.4
GPAT4-201ENST00000396987 MFAP1P55081 439 aaKnown RBP17.58■□□□□ 0.4
GPAT4-201ENST00000396987 MYO6Q9UM54 1294 aa17.58■□□□□ 0.4
GPAT4-201ENST00000396987 CT47B1P0C2W7 299 aaPredicted RBP17.57■□□□□ 0.4
GPAT4-201ENST00000396987 CTDP1Q9Y5B0 961 aaPredicted RBP17.57■□□□□ 0.4
GPAT4-201ENST00000396987 NUDCQ9Y266 331 aa17.57■□□□□ 0.4
GPAT4-201ENST00000396987 FBXW7Q969H0 707 aa17.57■□□□□ 0.4
GPAT4-201ENST00000396987 TRIM6-TRIM34B2RNG4 842 aa17.56■□□□□ 0.4
GPAT4-201ENST00000396987 TAX1BP1Q86VP1 789 aa17.56■□□□□ 0.4
GPAT4-201ENST00000396987 ERCC4Q92889 916 aaPredicted RBP17.56■□□□□ 0.4
GPAT4-201ENST00000396987 CFDP1Q9UEE9 299 aaPredicted RBP17.56■□□□□ 0.4
GPAT4-201ENST00000396987 GPATCH11Q8N954 259 aa17.56■□□□□ 0.4
GPAT4-201ENST00000396987 GOLGA6L10A0A0M3HER8 536 aa17.55■□□□□ 0.4
GPAT4-201ENST00000396987 GOLGA6L10A6NI86 522 aa17.55■□□□□ 0.4
GPAT4-201ENST00000396987 R3HCC1Q9Y3T6 440 aaKnown RBP17.55■□□□□ 0.4
GPAT4-201ENST00000396987 KIF16BQ96L93 1317 aa17.55■□□□□ 0.4
GPAT4-201ENST00000396987 CCDC47Q96A33 483 aaKnown RBP17.54■□□□□ 0.4
GPAT4-201ENST00000396987 CFAP57Q96MR6 1250 aa17.54■□□□□ 0.4
GPAT4-201ENST00000396987 BAZ1AQ9NRL2 1556 aaPredicted RBP17.54■□□□□ 0.4
GPAT4-201ENST00000396987 RGL3Q3MIN7 710 aa17.53■□□□□ 0.4
GPAT4-201ENST00000396987 KNSTRNQ9Y448 316 aa17.53■□□□□ 0.4
GPAT4-201ENST00000396987 CCDC43Q96MW1 224 aaKnown RBP17.53■□□□□ 0.4
GPAT4-201ENST00000396987 IFT57Q9NWB7 429 aa17.52■□□□□ 0.4
GPAT4-201ENST00000396987 AKAP17AQ02040 695 aaKnown RBP17.52■□□□□ 0.4
GPAT4-201ENST00000396987 FRAT2O75474 233 aaPredicted RBP17.51■□□□□ 0.39
GPAT4-201ENST00000396987 CWC22Q9HCG8 908 aaKnown RBP17.51■□□□□ 0.39
GPAT4-201ENST00000396987 IPO4Q8TEX9 1081 aaKnown RBP17.51■□□□□ 0.39
GPAT4-201ENST00000396987 OFD1O75665 1012 aa17.5■□□□□ 0.39
GPAT4-201ENST00000396987 USP8P40818 1118 aa17.5■□□□□ 0.39
GPAT4-201ENST00000396987 MCTP1Q6DN14 999 aa17.5■□□□□ 0.39
GPAT4-201ENST00000396987 FAM184AQ8NB25 1140 aa17.5■□□□□ 0.39
GPAT4-201ENST00000396987 IPO9Q96P70 1041 aaKnown RBP17.5■□□□□ 0.39
GPAT4-201ENST00000396987 CECR2Q9BXF3 1484 aa17.49■□□□□ 0.39
GPAT4-201ENST00000396987 SOX12O15370 315 aa17.49■□□□□ 0.39
GPAT4-201ENST00000396987 CEP164Q9UPV0 1460 aa17.49■□□□□ 0.39
GPAT4-201ENST00000396987 TCERG1O14776 1098 aaKnown RBP17.48■□□□□ 0.39
GPAT4-201ENST00000396987 PPM1EQ8WY54 764 aa17.48■□□□□ 0.39
GPAT4-201ENST00000396987 DDX49Q9Y6V7 483 aaKnown RBP17.47■□□□□ 0.39
GPAT4-201ENST00000396987 FLIIQ13045 1269 aa17.47■□□□□ 0.39
GPAT4-201ENST00000396987 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.47■□□□□ 0.39
GPAT4-201ENST00000396987 EPS15P42566 896 aa17.47■□□□□ 0.39
GPAT4-201ENST00000396987 GPATCH3Q96I76 525 aa17.46■□□□□ 0.39
GPAT4-201ENST00000396987 DDX11L8A8MPP1 907 aa17.46■□□□□ 0.39
GPAT4-201ENST00000396987 DIAPH3Q9NSV4 1193 aa17.46■□□□□ 0.39
GPAT4-201ENST00000396987 EIF3JO75822 258 aaKnown RBP17.46■□□□□ 0.39
GPAT4-201ENST00000396987 ZWINTO95229 277 aa17.45■□□□□ 0.38
GPAT4-201ENST00000396987 TNIKQ9UKE5 1360 aa17.45■□□□□ 0.38
GPAT4-201ENST00000396987 PMFBP1Q8TBY8 1022 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms