RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 DHX29Q7Z478 1369 aaKnown RBP15.92■□□□□ 0.14
SLC28A1-203ENST00000394573 AQRO60306 1485 aaKnown RBP eCLIP15.91■□□□□ 0.14
SLC28A1-203ENST00000394573 CCDC18Q5T9S5 1454 aa15.89■□□□□ 0.13
SLC28A1-203ENST00000394573 UNC13AQ9UPW8 1703 aa15.89■□□□□ 0.13
SLC28A1-203ENST00000394573 NBPF8Q3BBV2 869 aa15.88■□□□□ 0.13
SLC28A1-203ENST00000394573 KIF20AO95235 890 aa15.88■□□□□ 0.13
SLC28A1-203ENST00000394573 FAM177BA6PVY3 158 aa15.87■□□□□ 0.13
SLC28A1-203ENST00000394573 MTERF4Q7Z6M4 381 aaKnown RBP15.87■□□□□ 0.13
SLC28A1-203ENST00000394573 SPDYE4A6NLX3 237 aa15.87■□□□□ 0.13
SLC28A1-203ENST00000394573 DYNC1I1O14576 645 aa15.87■□□□□ 0.13
SLC28A1-203ENST00000394573 TERF1P54274 439 aa15.87■□□□□ 0.13
SLC28A1-203ENST00000394573 PANK3Q9H999 370 aa15.87■□□□□ 0.13
SLC28A1-203ENST00000394573 NASPP49321 788 aaPredicted RBP15.87■□□□□ 0.13
SLC28A1-203ENST00000394573 CCDC173Q0VFZ6 552 aa15.86■□□□□ 0.13
SLC28A1-203ENST00000394573 AEBP1Q8IUX7 1158 aa15.86■□□□□ 0.13
SLC28A1-203ENST00000394573 ATP2B3Q16720 1220 aa15.86■□□□□ 0.13
SLC28A1-203ENST00000394573 TOP2AP11388 1531 aaKnown RBP15.85■□□□□ 0.13
SLC28A1-203ENST00000394573 MYOM3Q5VTT5 1437 aa15.85■□□□□ 0.13
SLC28A1-203ENST00000394573 LETM1O95202 739 aaPredicted RBP15.85■□□□□ 0.13
SLC28A1-203ENST00000394573 GTPBP4Q9BZE4 634 aaKnown RBP15.85■□□□□ 0.13
SLC28A1-203ENST00000394573 ZBTB9Q96C00 473 aa15.84■□□□□ 0.13
SLC28A1-203ENST00000394573 UACAQ9BZF9 1416 aa15.83■□□□□ 0.12
SLC28A1-203ENST00000394573 CHMP5Q9NZZ3 219 aa15.83■□□□□ 0.12
SLC28A1-203ENST00000394573 ARHGAP35Q9NRY4 1499 aa15.82■□□□□ 0.12
SLC28A1-203ENST00000394573 LRPPRCP42704 1394 aaKnown RBP15.81■□□□□ 0.12
SLC28A1-203ENST00000394573 DDX11L8A8MPP1 907 aa15.81■□□□□ 0.12
SLC28A1-203ENST00000394573 PPP1R9BQ96SB3 815 aa15.81■□□□□ 0.12
SLC28A1-203ENST00000394573 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.8■□□□□ 0.12
SLC28A1-203ENST00000394573 IGHDP01880 384 aa15.8■□□□□ 0.12
SLC28A1-203ENST00000394573 LRRC9Q6ZRR7 1453 aa15.8■□□□□ 0.12
SLC28A1-203ENST00000394573 ISY1Q9ULR0 285 aaKnown RBP15.79■□□□□ 0.12
SLC28A1-203ENST00000394573 IRX5P78411 483 aaPredicted RBP15.78■□□□□ 0.12
SLC28A1-203ENST00000394573 PDE3BQ13370 1112 aa15.78■□□□□ 0.12
SLC28A1-203ENST00000394573 UPF2Q9HAU5 1272 aaKnown RBP15.78■□□□□ 0.12
SLC28A1-203ENST00000394573 KCNJ4P48050 445 aa15.78■□□□□ 0.12
SLC28A1-203ENST00000394573 TIAM1Q13009 1591 aa15.78■□□□□ 0.12
SLC28A1-203ENST00000394573 SASS6Q6UVJ0 657 aa15.78■□□□□ 0.12
SLC28A1-203ENST00000394573 P3H3Q8IVL6 736 aa15.78■□□□□ 0.12
SLC28A1-203ENST00000394573 TEX2Q8IWB9 1127 aa15.78■□□□□ 0.12
SLC28A1-203ENST00000394573 CHMP4CQ96CF2 233 aa15.78■□□□□ 0.12
SLC28A1-203ENST00000394573 ZNF771Q7L3S4 317 aaPredicted RBP15.77■□□□□ 0.12
SLC28A1-203ENST00000394573 PABPN1Q86U42 306 aaKnown RBP eCLIP15.77■□□□□ 0.12
SLC28A1-203ENST00000394573 ZNF710Q8N1W2 664 aa15.77■□□□□ 0.12
SLC28A1-203ENST00000394573 IRX3P78415 501 aaPredicted RBP15.77■□□□□ 0.11
SLC28A1-203ENST00000394573 NLRP1Q9C000 1473 aa15.77■□□□□ 0.11
SLC28A1-203ENST00000394573 TBC1D32Q96NH3 1257 aa15.76■□□□□ 0.11
SLC28A1-203ENST00000394573 RRP7BPQ9NSQ0 103 aa15.75■□□□□ 0.11
SLC28A1-203ENST00000394573 BRD2P25440 801 aaKnown RBP15.75■□□□□ 0.11
SLC28A1-203ENST00000394573 FOXD4L1Q9NU39 408 aa15.75■□□□□ 0.11
SLC28A1-203ENST00000394573 ZNF500O60304 480 aaPredicted RBP15.74■□□□□ 0.11
SLC28A1-203ENST00000394573 TNPO1Q92973 898 aaKnown RBP15.74■□□□□ 0.11
SLC28A1-203ENST00000394573 NOL7Q9UMY1 257 aaKnown RBP15.74■□□□□ 0.11
SLC28A1-203ENST00000394573 PTPRKQ15262 1439 aa15.74■□□□□ 0.11
SLC28A1-203ENST00000394573 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.74■□□□□ 0.11
SLC28A1-203ENST00000394573 RGS22Q8NE09 1264 aa15.74■□□□□ 0.11
SLC28A1-203ENST00000394573 CHIC2Q9UKJ5 165 aa15.74■□□□□ 0.11
SLC28A1-203ENST00000394573 MPNDQ8N594 471 aa15.72■□□□□ 0.11
SLC28A1-203ENST00000394573 MYBBP1AQ9BQG0 1328 aaKnown RBP15.71■□□□□ 0.11
SLC28A1-203ENST00000394573 SPATA31E1Q6ZUB1 1445 aa15.7■□□□□ 0.1
SLC28A1-203ENST00000394573 PRXQ9BXM0 1461 aa15.7■□□□□ 0.1
SLC28A1-203ENST00000394573 MFAP1P55081 439 aaKnown RBP15.69■□□□□ 0.1
SLC28A1-203ENST00000394573 U2AF2P26368 475 aaKnown RBP eCLIP15.69■□□□□ 0.1
SLC28A1-203ENST00000394573 ZNF692Q9BU19 519 aaPredicted RBP15.69■□□□□ 0.1
SLC28A1-203ENST00000394573 ZKSCAN5Q9Y2L8 839 aa15.69■□□□□ 0.1
SLC28A1-203ENST00000394573 BRD4O60885 1362 aaPredicted RBP15.68■□□□□ 0.1
SLC28A1-203ENST00000394573 CSPP1Q1MSJ5 1256 aa15.68■□□□□ 0.1
SLC28A1-203ENST00000394573 TRERF1Q96PN7 1200 aa15.68■□□□□ 0.1
SLC28A1-203ENST00000394573 CHRM1P11229 460 aaPredicted RBP15.68■□□□□ 0.1
SLC28A1-203ENST00000394573 TAF3Q5VWG9 929 aa15.68■□□□□ 0.1
SLC28A1-203ENST00000394573 NGEFQ8N5V2 710 aa15.67■□□□□ 0.1
SLC28A1-203ENST00000394573 ABCA5Q8WWZ7 1642 aa15.66■□□□□ 0.1
SLC28A1-203ENST00000394573 HFM1A2PYH4 1435 aa15.66■□□□□ 0.1
SLC28A1-203ENST00000394573 NAIPQ13075 1403 aa15.66■□□□□ 0.1
SLC28A1-203ENST00000394573 MYRIPQ8NFW9 859 aa15.65■□□□□ 0.1
SLC28A1-203ENST00000394573 DDX49Q9Y6V7 483 aaKnown RBP15.65■□□□□ 0.1
SLC28A1-203ENST00000394573 PTPN23Q9H3S7 1636 aa15.65■□□□□ 0.1
SLC28A1-203ENST00000394573 HSCBQ8IWL3 235 aa15.65■□□□□ 0.1
SLC28A1-203ENST00000394573 RBSNQ9H1K0 784 aa15.65■□□□□ 0.1
SLC28A1-203ENST00000394573 TRIM6-TRIM34B2RNG4 842 aa15.64■□□□□ 0.09
SLC28A1-203ENST00000394573 GBP4Q96PP9 640 aa15.64■□□□□ 0.09
SLC28A1-203ENST00000394573 TRIM34Q9BYJ4 488 aa15.64■□□□□ 0.09
SLC28A1-203ENST00000394573 FMN1Q68DA7 1419 aa15.64■□□□□ 0.09
SLC28A1-203ENST00000394573 BCAR3O75815 825 aa15.63■□□□□ 0.09
SLC28A1-203ENST00000394573 C22orf23Q9BZE7 217 aa15.63■□□□□ 0.09
SLC28A1-203ENST00000394573 KIF15Q9NS87 1388 aa15.63■□□□□ 0.09
SLC28A1-203ENST00000394573 BICRAQ9NZM4 1560 aa15.63■□□□□ 0.09
SLC28A1-203ENST00000394573 C17orf53Q8N3J3 647 aaPredicted RBP15.62■□□□□ 0.09
SLC28A1-203ENST00000394573 PDCL2Q8N4E4 241 aa15.62■□□□□ 0.09
SLC28A1-203ENST00000394573 DENND4BO75064 1496 aaPredicted RBP15.62■□□□□ 0.09
SLC28A1-203ENST00000394573 MAPK8IP3Q9UPT6 1336 aa15.62■□□□□ 0.09
SLC28A1-203ENST00000394573 MPHOSPH9Q99550 1183 aa15.62■□□□□ 0.09
SLC28A1-203ENST00000394573 KCNG1Q9UIX4 513 aa15.62■□□□□ 0.09
SLC28A1-203ENST00000394573 SKOR2Q2VWA4 1001 aaPredicted RBP15.61■□□□□ 0.09
SLC28A1-203ENST00000394573 CAVIN1Q6NZI2 390 aaKnown RBP15.61■□□□□ 0.09
SLC28A1-203ENST00000394573 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.61■□□□□ 0.09
SLC28A1-203ENST00000394573 USP47Q96K76 1375 aa15.61■□□□□ 0.09
SLC28A1-203ENST00000394573 SLC52A1Q9NWF4 448 aa15.61■□□□□ 0.09
SLC28A1-203ENST00000394573 VIRMAQ69YN4 1812 aaKnown RBP15.6■□□□□ 0.09
SLC28A1-203ENST00000394573 NLRP13Q86W25 1043 aa15.6■□□□□ 0.09
SLC28A1-203ENST00000394573 BCORL1Q5H9F3 1711 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms