RNA–Protein interactions for RNA: ENST00000391111.1

RNU11-3P-201, Transcript of RNA, U11 small nuclear 3, pseudogene, humanhuman

BASIC

Gene RNU11-3P, Length 133 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU11-3P-201ENST00000391111 GPCPD1Q9NPB8 672 aa3.49□□□□□ -1.85
RNU11-3P-201ENST00000391111 TRIM35Q9UPQ4 493 aa3.49□□□□□ -1.85
RNU11-3P-201ENST00000391111 BOLA1Q9Y3E2 137 aa3.49□□□□□ -1.85
RNU11-3P-201ENST00000391111 C19orf67A6NJJ6 358 aa3.48□□□□□ -1.85
RNU11-3P-201ENST00000391111 EVI5O60447 810 aa3.48□□□□□ -1.85
RNU11-3P-201ENST00000391111 OATP04181 439 aa3.48□□□□□ -1.85
RNU11-3P-201ENST00000391111 PTCD2Q8WV60 388 aaKnown RBP3.48□□□□□ -1.85
RNU11-3P-201ENST00000391111 DDX12PQ92771 950 aa3.48□□□□□ -1.85
RNU11-3P-201ENST00000391111 CCDC97Q96F63 343 aaPredicted RBP3.48□□□□□ -1.85
RNU11-3P-201ENST00000391111 SOCS7O14512 581 aa3.47□□□□□ -1.85
RNU11-3P-201ENST00000391111 PPP1R15AO75807 674 aaPredicted RBP3.47□□□□□ -1.85
RNU11-3P-201ENST00000391111 PHF14O94880 888 aa3.47□□□□□ -1.85
RNU11-3P-201ENST00000391111 IRX5P78411 483 aaPredicted RBP3.47□□□□□ -1.85
RNU11-3P-201ENST00000391111 TMEM259Q4ZIN3 620 aa3.47□□□□□ -1.85
RNU11-3P-201ENST00000391111 PDCD7Q8N8D1 485 aaKnown RBP3.47□□□□□ -1.85
RNU11-3P-201ENST00000391111 NECTIN2Q92692 538 aa3.47□□□□□ -1.85
RNU11-3P-201ENST00000391111 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.47□□□□□ -1.85
RNU11-3P-201ENST00000391111 NPDC1Q9NQX5 325 aaPredicted RBP3.47□□□□□ -1.85
RNU11-3P-201ENST00000391111 ZNF777Q9ULD5 760 aaPredicted RBP3.47□□□□□ -1.85
RNU11-3P-201ENST00000391111 ACIN1Q9UKV3 1341 aaKnown RBP3.46□□□□□ -1.85
RNU11-3P-201ENST00000391111 SLC34A2O95436 690 aa3.46□□□□□ -1.86
RNU11-3P-201ENST00000391111 TUSC1Q2TAM9 212 aa3.46□□□□□ -1.86
RNU11-3P-201ENST00000391111 PPP2R2DQ66LE6 453 aa3.46□□□□□ -1.86
RNU11-3P-201ENST00000391111 CERKQ8TCT0 537 aa3.46□□□□□ -1.86
RNU11-3P-201ENST00000391111 UPF1Q92900 1129 aaKnown RBP eCLIP3.46□□□□□ -1.86
RNU11-3P-201ENST00000391111 BEGAINQ9BUH8 593 aa3.46□□□□□ -1.86
RNU11-3P-201ENST00000391111 PLSCR2Q9NRY7 297 aa3.46□□□□□ -1.86
RNU11-3P-201ENST00000391111 PATL2C9JE40 543 aaKnown RBP3.45□□□□□ -1.86
RNU11-3P-201ENST00000391111 PRIM1P49642 420 aaKnown RBP3.45□□□□□ -1.86
RNU11-3P-201ENST00000391111 MDM2Q00987 491 aaPredicted RBP3.45□□□□□ -1.86
RNU11-3P-201ENST00000391111 EN1Q05925 392 aaPredicted RBP3.45□□□□□ -1.86
RNU11-3P-201ENST00000391111 WWC1Q8IX03 1113 aa3.45□□□□□ -1.86
RNU11-3P-201ENST00000391111 PROCA1Q8NCQ7 364 aaPredicted RBP3.45□□□□□ -1.86
RNU11-3P-201ENST00000391111 PRM3Q9NNZ6 103 aa3.45□□□□□ -1.86
RNU11-3P-201ENST00000391111 FAM217BQ9NTX9 383 aaPredicted RBP3.45□□□□□ -1.86
RNU11-3P-201ENST00000391111 COG6Q9Y2V7 657 aa3.45□□□□□ -1.86
RNU11-3P-201ENST00000391111 TYW1BQ6NUM6 668 aa3.44□□□□□ -1.86
RNU11-3P-201ENST00000391111 SLAIN1Q8ND83 568 aa3.44□□□□□ -1.86
RNU11-3P-201ENST00000391111 FBXW7Q969H0 707 aa3.44□□□□□ -1.86
RNU11-3P-201ENST00000391111 ZNF330Q9Y3S2 320 aaPredicted RBP3.44□□□□□ -1.86
RNU11-3P-201ENST00000391111 ATMINO43313 823 aaPredicted RBP3.43□□□□□ -1.86
RNU11-3P-201ENST00000391111 CLK2P49760 499 aaKnown RBP3.43□□□□□ -1.86
RNU11-3P-201ENST00000391111 MYSM1Q5VVJ2 828 aa3.43□□□□□ -1.86
RNU11-3P-201ENST00000391111 ASTLQ6HA08 431 aaPredicted RBP3.43□□□□□ -1.86
RNU11-3P-201ENST00000391111 POLR3EQ9NVU0 708 aa3.43□□□□□ -1.86
RNU11-3P-201ENST00000391111 RBM27Q9P2N5 1060 aaKnown RBP3.43□□□□□ -1.86
RNU11-3P-201ENST00000391111 ATP1B4Q9UN42 357 aaPredicted RBP3.43□□□□□ -1.86
RNU11-3P-201ENST00000391111 MAP3K7O43318 606 aa3.42□□□□□ -1.86
RNU11-3P-201ENST00000391111 GALR2O43603 387 aaPredicted RBP3.42□□□□□ -1.86
RNU11-3P-201ENST00000391111 PLCG2P16885 1265 aa3.42□□□□□ -1.86
RNU11-3P-201ENST00000391111 GJA5P36382 358 aa3.42□□□□□ -1.86
RNU11-3P-201ENST00000391111 RFC5P40937 340 aa3.42□□□□□ -1.86
RNU11-3P-201ENST00000391111 ATN1P54259 1190 aaPredicted RBP3.42□□□□□ -1.86
RNU11-3P-201ENST00000391111 TMEM92Q6UXU6 159 aa3.42□□□□□ -1.86
RNU11-3P-201ENST00000391111 METTL3Q86U44 580 aaKnown RBP3.42□□□□□ -1.86
RNU11-3P-201ENST00000391111 TTC13Q8NBP0 860 aa3.42□□□□□ -1.86
RNU11-3P-201ENST00000391111 PXYLP1Q8TE99 480 aa3.42□□□□□ -1.86
RNU11-3P-201ENST00000391111 POM121Q96HA1 1249 aa3.42□□□□□ -1.86
RNU11-3P-201ENST00000391111 PHOX2BQ99453 314 aa3.42□□□□□ -1.86
RNU11-3P-201ENST00000391111 SPTLC1O15269 473 aa3.41□□□□□ -1.86
RNU11-3P-201ENST00000391111 AEBP1Q8IUX7 1158 aa3.41□□□□□ -1.86
RNU11-3P-201ENST00000391111 TBC1D2Q9BYX2 928 aa3.41□□□□□ -1.86
RNU11-3P-201ENST00000391111 SNRKQ9NRH2 765 aa3.41□□□□□ -1.86
RNU11-3P-201ENST00000391111 PCDHGA10Q9Y5H3 936 aa3.41□□□□□ -1.86
RNU11-3P-201ENST00000391111 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.4□□□□□ -1.87
RNU11-3P-201ENST00000391111 TMCO4Q5TGY1 634 aa3.4□□□□□ -1.87
RNU11-3P-201ENST00000391111 RIC3Q7Z5B4 369 aa3.4□□□□□ -1.87
RNU11-3P-201ENST00000391111 RGS22Q8NE09 1264 aa3.4□□□□□ -1.87
RNU11-3P-201ENST00000391111 RBM46Q8TBY0 533 aaKnown RBP3.4□□□□□ -1.87
RNU11-3P-201ENST00000391111 CDHR5Q9HBB8 845 aa3.4□□□□□ -1.87
RNU11-3P-201ENST00000391111 ADGRG1Q9Y653 693 aa3.4□□□□□ -1.87
RNU11-3P-201ENST00000391111 C6orf132Q5T0Z8 1188 aa3.39□□□□□ -1.87
RNU11-3P-201ENST00000391111 RETREG2Q8NC44 543 aa3.39□□□□□ -1.87
RNU11-3P-201ENST00000391111 JPH4Q96JJ6 628 aa3.39□□□□□ -1.87
RNU11-3P-201ENST00000391111 CALR3Q96L12 384 aaKnown RBP3.39□□□□□ -1.87
RNU11-3P-201ENST00000391111 KDM4FA0A1W2PPD8 638 aa3.38□□□□□ -1.87
RNU11-3P-201ENST00000391111 BRD1O95696 1058 aa3.38□□□□□ -1.87
RNU11-3P-201ENST00000391111 WASHC4Q2M389 1173 aa3.38□□□□□ -1.87
RNU11-3P-201ENST00000391111 TSR1Q2NL82 804 aaKnown RBP3.38□□□□□ -1.87
RNU11-3P-201ENST00000391111 SULF1Q8IWU6 871 aa3.38□□□□□ -1.87
RNU11-3P-201ENST00000391111 SPIRE2Q8WWL2 714 aa3.38□□□□□ -1.87
RNU11-3P-201ENST00000391111 RBM33Q96EV2 1170 aaKnown RBP3.38□□□□□ -1.87
RNU11-3P-201ENST00000391111 GZF1Q9H116 711 aaPredicted RBP3.38□□□□□ -1.87
RNU11-3P-201ENST00000391111 USTQ9Y2C2 406 aa3.38□□□□□ -1.87
RNU11-3P-201ENST00000391111 LILRB3O75022 631 aa3.37□□□□□ -1.87
RNU11-3P-201ENST00000391111 SEC24BO95487 1268 aa3.37□□□□□ -1.87
RNU11-3P-201ENST00000391111 CD46P15529 392 aa3.37□□□□□ -1.87
RNU11-3P-201ENST00000391111 FOSBP53539 338 aa3.37□□□□□ -1.87
RNU11-3P-201ENST00000391111 MFAP1P55081 439 aaKnown RBP3.37□□□□□ -1.87
RNU11-3P-201ENST00000391111 PRSS12P56730 875 aa3.37□□□□□ -1.87
RNU11-3P-201ENST00000391111 KCNA1Q09470 495 aa3.37□□□□□ -1.87
RNU11-3P-201ENST00000391111 IRF5Q13568 498 aa3.37□□□□□ -1.87
RNU11-3P-201ENST00000391111 PRPF38BQ5VTL8 546 aaKnown RBP3.37□□□□□ -1.87
RNU11-3P-201ENST00000391111 PADI6Q6TGC4 694 aa3.37□□□□□ -1.87
RNU11-3P-201ENST00000391111 NUTM1Q86Y26 1132 aa3.37□□□□□ -1.87
RNU11-3P-201ENST00000391111 ZNF710Q8N1W2 664 aa3.37□□□□□ -1.87
RNU11-3P-201ENST00000391111 MTMR14Q8NCE2 650 aa3.37□□□□□ -1.87
RNU11-3P-201ENST00000391111 ZDHHC16Q969W1 377 aa3.37□□□□□ -1.87
RNU11-3P-201ENST00000391111 PBXIP1Q96AQ6 731 aa3.37□□□□□ -1.87
RNU11-3P-201ENST00000391111 GDPD2Q9HCC8 539 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms