RNA–Protein interactions for RNA: ENST00000390879.1

SNORA48.1-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 135 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.1-201ENST00000390879 MDM2Q00987 491 aaPredicted RBP3.37□□□□□ -1.87
SNORA48.1-201ENST00000390879 MCM6Q14566 821 aa3.37□□□□□ -1.87
SNORA48.1-201ENST00000390879 OXER1Q8TDS5 423 aa3.37□□□□□ -1.87
SNORA48.1-201ENST00000390879 CDHR5Q9HBB8 845 aa3.37□□□□□ -1.87
SNORA48.1-201ENST00000390879 ZNF777Q9ULD5 760 aaPredicted RBP3.37□□□□□ -1.87
SNORA48.1-201ENST00000390879 ZBTB7CA1YPR0 619 aa3.36□□□□□ -1.87
SNORA48.1-201ENST00000390879 TBC1D12O60347 775 aa3.36□□□□□ -1.87
SNORA48.1-201ENST00000390879 ATN1P54259 1190 aaPredicted RBP3.36□□□□□ -1.87
SNORA48.1-201ENST00000390879 SH3D19Q5HYK7 790 aa3.36□□□□□ -1.87
SNORA48.1-201ENST00000390879 PROSER2Q86WR7 435 aaPredicted RBP3.36□□□□□ -1.87
SNORA48.1-201ENST00000390879 RBM33Q96EV2 1170 aaKnown RBP3.36□□□□□ -1.87
SNORA48.1-201ENST00000390879 POM121Q96HA1 1249 aa3.36□□□□□ -1.87
SNORA48.1-201ENST00000390879 DCBLD2Q96PD2 775 aa3.36□□□□□ -1.87
SNORA48.1-201ENST00000390879 TMEM121BQ9BXQ6 578 aaPredicted RBP3.36□□□□□ -1.87
SNORA48.1-201ENST00000390879 GOPCQ9HD26 462 aa3.36□□□□□ -1.87
SNORA48.1-201ENST00000390879 POLR3EQ9NVU0 708 aa3.36□□□□□ -1.87
SNORA48.1-201ENST00000390879 MAP3K7O43318 606 aa3.35□□□□□ -1.87
SNORA48.1-201ENST00000390879 PLCG2P16885 1265 aa3.35□□□□□ -1.87
SNORA48.1-201ENST00000390879 CLCN1P35523 988 aa3.35□□□□□ -1.87
SNORA48.1-201ENST00000390879 PTGER2P43116 358 aa3.35□□□□□ -1.87
SNORA48.1-201ENST00000390879 IRX5P78411 483 aaPredicted RBP3.35□□□□□ -1.87
SNORA48.1-201ENST00000390879 FAM161AQ3B820 660 aa3.35□□□□□ -1.87
SNORA48.1-201ENST00000390879 TMEM92Q6UXU6 159 aa3.35□□□□□ -1.87
SNORA48.1-201ENST00000390879 PROCA1Q8NCQ7 364 aaPredicted RBP3.35□□□□□ -1.87
SNORA48.1-201ENST00000390879 NLRP7Q8WX94 980 aa3.35□□□□□ -1.87
SNORA48.1-201ENST00000390879 NECTIN2Q92692 538 aa3.35□□□□□ -1.87
SNORA48.1-201ENST00000390879 PHOX2BQ99453 314 aa3.35□□□□□ -1.87
SNORA48.1-201ENST00000390879 OCEL1Q9H607 264 aa3.35□□□□□ -1.87
SNORA48.1-201ENST00000390879 GPCPD1Q9NPB8 672 aa3.35□□□□□ -1.87
SNORA48.1-201ENST00000390879 RAD21O60216 631 aa3.34□□□□□ -1.87
SNORA48.1-201ENST00000390879 SSTR3P32745 418 aaPredicted RBP3.34□□□□□ -1.87
SNORA48.1-201ENST00000390879 CCDC97Q96F63 343 aaPredicted RBP3.34□□□□□ -1.87
SNORA48.1-201ENST00000390879 BEGAINQ9BUH8 593 aa3.34□□□□□ -1.87
SNORA48.1-201ENST00000390879 EN1Q05925 392 aaPredicted RBP3.33□□□□□ -1.88
SNORA48.1-201ENST00000390879 SKIV2LQ15477 1246 aaKnown RBP3.33□□□□□ -1.88
SNORA48.1-201ENST00000390879 TSR1Q2NL82 804 aaKnown RBP3.33□□□□□ -1.88
SNORA48.1-201ENST00000390879 NPDC1Q9NQX5 325 aaPredicted RBP3.33□□□□□ -1.88
SNORA48.1-201ENST00000390879 CCDC9Q9Y3X0 531 aaKnown RBP3.33□□□□□ -1.88
SNORA48.1-201ENST00000390879 ATMINO43313 823 aaPredicted RBP3.32□□□□□ -1.88
SNORA48.1-201ENST00000390879 AEBP1Q8IUX7 1158 aa3.32□□□□□ -1.88
SNORA48.1-201ENST00000390879 PELP1Q8IZL8 1130 aaKnown RBP3.32□□□□□ -1.88
SNORA48.1-201ENST00000390879 L3MBTL3Q96JM7 780 aaPredicted RBP3.32□□□□□ -1.88
SNORA48.1-201ENST00000390879 TMUB1Q9BVT8 246 aa3.32□□□□□ -1.88
SNORA48.1-201ENST00000390879 IER5LQ5T953 404 aa3.31□□□□□ -1.88
SNORA48.1-201ENST00000390879 MYSM1Q5VVJ2 828 aa3.31□□□□□ -1.88
SNORA48.1-201ENST00000390879 FNBP4Q8N3X1 1017 aaPredicted RBP3.31□□□□□ -1.88
SNORA48.1-201ENST00000390879 SNRKQ9NRH2 765 aa3.31□□□□□ -1.88
SNORA48.1-201ENST00000390879 FAM217BQ9NTX9 383 aaPredicted RBP3.31□□□□□ -1.88
SNORA48.1-201ENST00000390879 SERPINA10Q9UK55 444 aa3.31□□□□□ -1.88
SNORA48.1-201ENST00000390879 COG6Q9Y2V7 657 aa3.31□□□□□ -1.88
SNORA48.1-201ENST00000390879 PHF14O94880 888 aa3.3□□□□□ -1.88
SNORA48.1-201ENST00000390879 SEC24BO95487 1268 aa3.3□□□□□ -1.88
SNORA48.1-201ENST00000390879 CLK2P49760 499 aaKnown RBP3.3□□□□□ -1.88
SNORA48.1-201ENST00000390879 ASTLQ6HA08 431 aaPredicted RBP3.3□□□□□ -1.88
SNORA48.1-201ENST00000390879 PADI6Q6TGC4 694 aa3.3□□□□□ -1.88
SNORA48.1-201ENST00000390879 METTL3Q86U44 580 aaKnown RBP3.3□□□□□ -1.88
SNORA48.1-201ENST00000390879 KCTD17Q8N5Z5 321 aa3.3□□□□□ -1.88
SNORA48.1-201ENST00000390879 SLAIN1Q8ND83 568 aa3.3□□□□□ -1.88
SNORA48.1-201ENST00000390879 PTCD2Q8WV60 388 aaKnown RBP3.3□□□□□ -1.88
SNORA48.1-201ENST00000390879 EPAS1Q99814 870 aa3.3□□□□□ -1.88
SNORA48.1-201ENST00000390879 TBC1D2Q9BYX2 928 aa3.3□□□□□ -1.88
SNORA48.1-201ENST00000390879 ZNF330Q9Y3S2 320 aaPredicted RBP3.3□□□□□ -1.88
SNORA48.1-201ENST00000390879 PCDHGA10Q9Y5H3 936 aa3.3□□□□□ -1.88
SNORA48.1-201ENST00000390879 SPDYE5A6NIY4 337 aa3.29□□□□□ -1.88
SNORA48.1-201ENST00000390879 OATP04181 439 aa3.29□□□□□ -1.88
SNORA48.1-201ENST00000390879 RFC5P40937 340 aa3.29□□□□□ -1.88
SNORA48.1-201ENST00000390879 CSPP1Q1MSJ5 1256 aa3.29□□□□□ -1.88
SNORA48.1-201ENST00000390879 FBXO31Q5XUX0 539 aaPredicted RBP3.29□□□□□ -1.88
SNORA48.1-201ENST00000390879 TYW1BQ6NUM6 668 aa3.29□□□□□ -1.88
SNORA48.1-201ENST00000390879 RETREG2Q8NC44 543 aa3.29□□□□□ -1.88
SNORA48.1-201ENST00000390879 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.29□□□□□ -1.88
SNORA48.1-201ENST00000390879 TRAIPQ9BWF2 469 aa3.29□□□□□ -1.88
SNORA48.1-201ENST00000390879 ANO8Q9HCE9 1232 aaPredicted RBP3.29□□□□□ -1.88
SNORA48.1-201ENST00000390879 COLQQ9Y215 455 aaPredicted RBP3.29□□□□□ -1.88
SNORA48.1-201ENST00000390879 ADGRG1Q9Y653 693 aa3.29□□□□□ -1.88
SNORA48.1-201ENST00000390879 ABL2P42684 1182 aa3.28□□□□□ -1.88
SNORA48.1-201ENST00000390879 C3orf67Q6ZVT6 689 aa3.28□□□□□ -1.88
SNORA48.1-201ENST00000390879 GDPD2Q9HCC8 539 aa3.28□□□□□ -1.88
SNORA48.1-201ENST00000390879 LIMD1Q9UGP4 676 aa3.28□□□□□ -1.88
SNORA48.1-201ENST00000390879 MTMR14Q8NCE2 650 aa3.27□□□□□ -1.89
SNORA48.1-201ENST00000390879 BANK1Q8NDB2 785 aa3.27□□□□□ -1.89
SNORA48.1-201ENST00000390879 PXYLP1Q8TE99 480 aa3.27□□□□□ -1.89
SNORA48.1-201ENST00000390879 PCDHGA4Q9Y5G9 962 aa3.27□□□□□ -1.89
SNORA48.1-201ENST00000390879 LOC100996750A0A140TA64 210 aa3.26□□□□□ -1.89
SNORA48.1-201ENST00000390879 POM121CA8CG34 1229 aa3.26□□□□□ -1.89
SNORA48.1-201ENST00000390879 AP1G2O75843 785 aa3.26□□□□□ -1.89
SNORA48.1-201ENST00000390879 SLC34A2O95436 690 aa3.26□□□□□ -1.89
SNORA48.1-201ENST00000390879 IRF5Q13568 498 aa3.26□□□□□ -1.89
SNORA48.1-201ENST00000390879 TMEM259Q4ZIN3 620 aa3.26□□□□□ -1.89
SNORA48.1-201ENST00000390879 C6orf132Q5T0Z8 1188 aa3.26□□□□□ -1.89
SNORA48.1-201ENST00000390879 RIC3Q7Z5B4 369 aa3.26□□□□□ -1.89
SNORA48.1-201ENST00000390879 WWC1Q8IX03 1113 aa3.26□□□□□ -1.89
SNORA48.1-201ENST00000390879 ZNF454Q8N9F8 522 aa3.26□□□□□ -1.89
SNORA48.1-201ENST00000390879 SPIRE2Q8WWL2 714 aa3.26□□□□□ -1.89
SNORA48.1-201ENST00000390879 FBXW7Q969H0 707 aa3.26□□□□□ -1.89
SNORA48.1-201ENST00000390879 JPH4Q96JJ6 628 aa3.26□□□□□ -1.89
SNORA48.1-201ENST00000390879 CALR3Q96L12 384 aaKnown RBP3.26□□□□□ -1.89
SNORA48.1-201ENST00000390879 KRTAP4-6Q9BYQ5 205 aa3.26□□□□□ -1.89
SNORA48.1-201ENST00000390879 GZF1Q9H116 711 aaPredicted RBP3.26□□□□□ -1.89
SNORA48.1-201ENST00000390879 DIXDC1Q155Q3 683 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms