RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 TMX4Q9H1E5 349 aaPredicted RBP19.29■□□□□ 0.68
ALK-201ENST00000389048 KIF16BQ96L93 1317 aa19.29■□□□□ 0.68
ALK-201ENST00000389048 ZNF771Q7L3S4 317 aaPredicted RBP19.28■□□□□ 0.68
ALK-201ENST00000389048 FOSBP53539 338 aa19.27■□□□□ 0.68
ALK-201ENST00000389048 MCTP1Q6DN14 999 aa19.26■□□□□ 0.67
ALK-201ENST00000389048 NGEFQ8N5V2 710 aa19.26■□□□□ 0.67
ALK-201ENST00000389048 SPAG9O60271 1321 aaKnown RBP19.25■□□□□ 0.67
ALK-201ENST00000389048 CSPP1Q1MSJ5 1256 aa19.25■□□□□ 0.67
ALK-201ENST00000389048 SETQ01105 290 aaPredicted RBP19.25■□□□□ 0.67
ALK-201ENST00000389048 DDX49Q9Y6V7 483 aaKnown RBP19.24■□□□□ 0.67
ALK-201ENST00000389048 ST18O60284 1047 aa19.23■□□□□ 0.67
ALK-201ENST00000389048 ANKRD45Q5TZF3 282 aa19.23■□□□□ 0.67
ALK-201ENST00000389048 CENPJQ9HC77 1338 aaPredicted RBP19.23■□□□□ 0.67
ALK-201ENST00000389048 NECTIN2Q92692 538 aa19.22■□□□□ 0.67
ALK-201ENST00000389048 PCMTD1Q96MG8 357 aaPredicted RBP19.21■□□□□ 0.67
ALK-201ENST00000389048 PHF14O94880 888 aa19.21■□□□□ 0.67
ALK-201ENST00000389048 FAM184AQ8NB25 1140 aa19.21■□□□□ 0.67
ALK-201ENST00000389048 GOLGA6L19H0YKK7 550 aa19.2■□□□□ 0.66
ALK-201ENST00000389048 HMMRO75330 724 aa19.2■□□□□ 0.66
ALK-201ENST00000389048 RSPH6AQ9H0K4 717 aa19.2■□□□□ 0.66
ALK-201ENST00000389048 CCDC34Q96HJ3 373 aa19.2■□□□□ 0.66
ALK-201ENST00000389048 WRNQ14191 1432 aaPredicted RBP eCLIP19.19■□□□□ 0.66
ALK-201ENST00000389048 HDGFP51858 240 aaKnown RBP19.19■□□□□ 0.66
ALK-201ENST00000389048 FAM13BQ9NYF5 915 aa19.19■□□□□ 0.66
ALK-201ENST00000389048 GTF2E1P29083 439 aaPredicted RBP19.18■□□□□ 0.66
ALK-201ENST00000389048 KDM4AO75164 1064 aa19.18■□□□□ 0.66
ALK-201ENST00000389048 BECN2A8MW95 431 aa19.17■□□□□ 0.66
ALK-201ENST00000389048 KIF27Q86VH2 1401 aa19.17■□□□□ 0.66
ALK-201ENST00000389048 SETD5Q9C0A6 1442 aa19.16■□□□□ 0.66
ALK-201ENST00000389048 TNIKQ9UKE5 1360 aa19.16■□□□□ 0.66
ALK-201ENST00000389048 AMPHP49418 695 aa19.16■□□□□ 0.66
ALK-201ENST00000389048 TSR1Q2NL82 804 aaKnown RBP19.16■□□□□ 0.66
ALK-201ENST00000389048 RALBP1Q15311 655 aa19.16■□□□□ 0.66
ALK-201ENST00000389048 DDX11L8A8MPP1 907 aa19.15■□□□□ 0.66
ALK-201ENST00000389048 EEA1Q15075 1411 aa19.15■□□□□ 0.66
ALK-201ENST00000389048 KANK4Q5T7N3 995 aaPredicted RBP19.15■□□□□ 0.66
ALK-201ENST00000389048 CEP164Q9UPV0 1460 aa19.15■□□□□ 0.66
ALK-201ENST00000389048 EXOC6Q8TAG9 804 aa19.14■□□□□ 0.65
ALK-201ENST00000389048 SAMD1Q6SPF0 538 aaPredicted RBP19.14■□□□□ 0.65
ALK-201ENST00000389048 CRBNQ96SW2 442 aa19.13■□□□□ 0.65
ALK-201ENST00000389048 GSE1Q14687 1217 aa19.13■□□□□ 0.65
ALK-201ENST00000389048 NGDNQ8NEJ9 315 aaKnown RBP19.13■□□□□ 0.65
ALK-201ENST00000389048 MPHOSPH9Q99550 1183 aa19.12■□□□□ 0.65
ALK-201ENST00000389048 ERCC6Q03468 1493 aa19.12■□□□□ 0.65
ALK-201ENST00000389048 PDE4AP27815 886 aa19.11■□□□□ 0.65
ALK-201ENST00000389048 MSH5O43196 834 aa19.11■□□□□ 0.65
ALK-201ENST00000389048 AKAP17AQ02040 695 aaKnown RBP19.1■□□□□ 0.65
ALK-201ENST00000389048 EIF2S2P20042 333 aaKnown RBP19.1■□□□□ 0.65
ALK-201ENST00000389048 ANO2Q9NQ90 1003 aa19.1■□□□□ 0.65
ALK-201ENST00000389048 HOMER1Q86YM7 354 aa19.09■□□□□ 0.65
ALK-201ENST00000389048 COG6Q9Y2V7 657 aa19.09■□□□□ 0.65
ALK-201ENST00000389048 TRAK1Q9UPV9 953 aa19.09■□□□□ 0.65
ALK-201ENST00000389048 SKIDA1Q1XH10 827 aa19.08■□□□□ 0.65
ALK-201ENST00000389048 TPM2P07951 284 aa19.08■□□□□ 0.65
ALK-201ENST00000389048 CALRP27797 417 aaKnown RBP19.07■□□□□ 0.64
ALK-201ENST00000389048 NUP155O75694 1391 aa19.07■□□□□ 0.64
ALK-201ENST00000389048 APPP05067 770 aa19.07■□□□□ 0.64
ALK-201ENST00000389048 ARHGAP35Q9NRY4 1499 aa19.06■□□□□ 0.64
ALK-201ENST00000389048 TCEAL9Q9UHQ7 104 aa19.06■□□□□ 0.64
ALK-201ENST00000389048 DHX16O60231 1041 aaKnown RBP19.06■□□□□ 0.64
ALK-201ENST00000389048 RAB3GAP2Q9H2M9 1393 aa19.05■□□□□ 0.64
ALK-201ENST00000389048 TPM1P09493 284 aa19.05■□□□□ 0.64
ALK-201ENST00000389048 NAP1L1P55209 391 aaKnown RBP19.05■□□□□ 0.64
ALK-201ENST00000389048 FAM161AQ3B820 660 aa19.05■□□□□ 0.64
ALK-201ENST00000389048 BICD2Q8TD16 824 aa19.04■□□□□ 0.64
ALK-201ENST00000389048 CCDC70Q6NSX1 233 aa19.04■□□□□ 0.64
ALK-201ENST00000389048 DIAPH3Q9NSV4 1193 aa19.03■□□□□ 0.64
ALK-201ENST00000389048 TTLL5Q6EMB2 1281 aa19.03■□□□□ 0.64
ALK-201ENST00000389048 HNRNPMP52272 730 aaKnown RBP eCLIP19.03■□□□□ 0.64
ALK-201ENST00000389048 DHX37Q8IY37 1157 aaKnown RBP19.03■□□□□ 0.64
ALK-201ENST00000389048 USP35Q9P2H5 1018 aa19.02■□□□□ 0.64
ALK-201ENST00000389048 MTMR7Q9Y216 660 aa19.02■□□□□ 0.64
ALK-201ENST00000389048 GPS2Q13227 327 aa19.02■□□□□ 0.63
ALK-201ENST00000389048 KIF3AQ9Y496 699 aa19.02■□□□□ 0.63
ALK-201ENST00000389048 TERF2IPQ9NYB0 399 aa19.01■□□□□ 0.63
ALK-201ENST00000389048 SYNE3Q6ZMZ3 975 aa19.01■□□□□ 0.63
ALK-201ENST00000389048 VPS37CA5D8V6 355 aaPredicted RBP19.01■□□□□ 0.63
ALK-201ENST00000389048 CNKSR2Q8WXI2 1034 aa19.01■□□□□ 0.63
ALK-201ENST00000389048 PANK3Q9H999 370 aa19.01■□□□□ 0.63
ALK-201ENST00000389048 SOGA1O94964 1423 aa19■□□□□ 0.63
ALK-201ENST00000389048 FYB1O15117 783 aa19■□□□□ 0.63
ALK-201ENST00000389048 L3MBTL2Q969R5 705 aa19■□□□□ 0.63
ALK-201ENST00000389048 KIF3BO15066 747 aa19■□□□□ 0.63
ALK-201ENST00000389048 TRIM29Q14134 588 aa18.99■□□□□ 0.63
ALK-201ENST00000389048 TRIM34Q9BYJ4 488 aa18.99■□□□□ 0.63
ALK-201ENST00000389048 CENPQQ7L2Z9 268 aaPredicted RBP18.98■□□□□ 0.63
ALK-201ENST00000389048 NFXL1Q6ZNB6 911 aa18.98■□□□□ 0.63
ALK-201ENST00000389048 IFT57Q9NWB7 429 aa18.98■□□□□ 0.63
ALK-201ENST00000389048 EIF3AQ14152 1382 aaKnown RBP18.98■□□□□ 0.63
ALK-201ENST00000389048 SYTL4Q96C24 671 aaPredicted RBP18.97■□□□□ 0.63
ALK-201ENST00000389048 CTDP1Q9Y5B0 961 aaPredicted RBP18.97■□□□□ 0.63
ALK-201ENST00000389048 KRI1Q8N9T8 703 aaKnown RBP18.97■□□□□ 0.63
ALK-201ENST00000389048 RRP1P56182 461 aaKnown RBP18.96■□□□□ 0.63
ALK-201ENST00000389048 RRP12Q5JTH9 1297 aaKnown RBP18.96■□□□□ 0.63
ALK-201ENST00000389048 C1orf141Q5JVX7 400 aa18.95■□□□□ 0.62
ALK-201ENST00000389048 PDILTQ8N807 584 aa18.95■□□□□ 0.62
ALK-201ENST00000389048 C9orf78Q9NZ63 289 aaPredicted RBP18.95■□□□□ 0.62
ALK-201ENST00000389048 ZNF428Q96B54 188 aa18.95■□□□□ 0.62
ALK-201ENST00000389048 R3HCC1Q9Y3T6 440 aaKnown RBP18.95■□□□□ 0.62
ALK-201ENST00000389048 FHAD1B1AJZ9 1412 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms