RNA–Protein interactions for RNA: ENST00000382499.6

SYNJ1-203, Transcript of synaptojanin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNJ1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNJ1-203ENST00000382499 SMC4Q9NTJ3 1288 aa11.96□□□□□ -0.49
SYNJ1-203ENST00000382499 IBSPP21815 317 aaPredicted RBP11.96□□□□□ -0.5
SYNJ1-203ENST00000382499 GTF3C3Q9Y5Q9 886 aa11.96□□□□□ -0.5
SYNJ1-203ENST00000382499 AK7Q96M32 723 aa11.96□□□□□ -0.5
SYNJ1-203ENST00000382499 NUTM2FA1L443 756 aa11.95□□□□□ -0.5
SYNJ1-203ENST00000382499 CCDC47Q96A33 483 aaKnown RBP11.95□□□□□ -0.5
SYNJ1-203ENST00000382499 PDS5BQ9NTI5 1447 aa11.95□□□□□ -0.5
SYNJ1-203ENST00000382499 PEG3Q9GZU2 1588 aa11.94□□□□□ -0.5
SYNJ1-203ENST00000382499 PIP4K2BP78356 416 aa11.93□□□□□ -0.5
SYNJ1-203ENST00000382499 CC2D1BQ5T0F9 858 aaKnown RBP11.93□□□□□ -0.5
SYNJ1-203ENST00000382499 WIZO95785 1651 aa11.93□□□□□ -0.5
SYNJ1-203ENST00000382499 LRRFIP1Q32MZ4 808 aaKnown RBP11.93□□□□□ -0.5
SYNJ1-203ENST00000382499 ZFYVE27Q5T4F4 411 aa11.93□□□□□ -0.5
SYNJ1-203ENST00000382499 HSCBQ8IWL3 235 aa11.93□□□□□ -0.5
SYNJ1-203ENST00000382499 NUTM2BA6NNL0 878 aaPredicted RBP11.92□□□□□ -0.5
SYNJ1-203ENST00000382499 NUTM2EB1AL46 878 aaPredicted RBP11.92□□□□□ -0.5
SYNJ1-203ENST00000382499 NUTM2AQ8IVF1 878 aaPredicted RBP11.92□□□□□ -0.5
SYNJ1-203ENST00000382499 MYCNP04198 464 aaPredicted RBP11.92□□□□□ -0.5
SYNJ1-203ENST00000382499 TMF1P82094 1093 aa11.92□□□□□ -0.5
SYNJ1-203ENST00000382499 IPO8O15397 1037 aaKnown RBP11.92□□□□□ -0.5
SYNJ1-203ENST00000382499 SF3A1Q15459 793 aaKnown RBP11.92□□□□□ -0.5
SYNJ1-203ENST00000382499 KIF3AQ9Y496 699 aa11.92□□□□□ -0.5
SYNJ1-203ENST00000382499 NGEFQ8N5V2 710 aa11.91□□□□□ -0.5
SYNJ1-203ENST00000382499 LAMC3Q9Y6N6 1575 aa11.91□□□□□ -0.5
SYNJ1-203ENST00000382499 TRIM6-TRIM34B2RNG4 842 aa11.9□□□□□ -0.5
SYNJ1-203ENST00000382499 RGS3P49796 1198 aa11.9□□□□□ -0.5
SYNJ1-203ENST00000382499 PCMTD1Q96MG8 357 aaPredicted RBP11.9□□□□□ -0.5
SYNJ1-203ENST00000382499 PLCD3Q8N3E9 789 aa11.9□□□□□ -0.51
SYNJ1-203ENST00000382499 MPHOSPH10O00566 681 aaKnown RBP11.89□□□□□ -0.51
SYNJ1-203ENST00000382499 RFX1P22670 979 aa11.89□□□□□ -0.51
SYNJ1-203ENST00000382499 HMGB2P26583 209 aaKnown RBP11.89□□□□□ -0.51
SYNJ1-203ENST00000382499 PSME1Q06323 249 aa11.89□□□□□ -0.51
SYNJ1-203ENST00000382499 SLC4A10Q6U841 1118 aa11.88□□□□□ -0.51
SYNJ1-203ENST00000382499 RRP12Q5JTH9 1297 aaKnown RBP11.88□□□□□ -0.51
SYNJ1-203ENST00000382499 SENP3-EIF4A1A0A087X0R7 540 aa11.88□□□□□ -0.51
SYNJ1-203ENST00000382499 SPRYD3Q8NCJ5 442 aa11.88□□□□□ -0.51
SYNJ1-203ENST00000382499 APPP05067 770 aa11.88□□□□□ -0.51
SYNJ1-203ENST00000382499 TTLL12Q14166 644 aaPredicted RBP11.88□□□□□ -0.51
SYNJ1-203ENST00000382499 RDXP35241 583 aaKnown RBP11.87□□□□□ -0.51
SYNJ1-203ENST00000382499 CYB5RLQ6IPT4 315 aa11.87□□□□□ -0.51
SYNJ1-203ENST00000382499 CUX2O14529 1486 aa11.87□□□□□ -0.51
SYNJ1-203ENST00000382499 PATL2C9JE40 543 aaKnown RBP11.86□□□□□ -0.51
SYNJ1-203ENST00000382499 NEXNQ0ZGT2 675 aa11.86□□□□□ -0.51
SYNJ1-203ENST00000382499 HMMRO75330 724 aa11.86□□□□□ -0.51
SYNJ1-203ENST00000382499 TPM1P09493 284 aa11.86□□□□□ -0.51
SYNJ1-203ENST00000382499 CHMP4CQ96CF2 233 aa11.86□□□□□ -0.51
SYNJ1-203ENST00000382499 NUTM2DQ5VT03 806 aaPredicted RBP11.85□□□□□ -0.51
SYNJ1-203ENST00000382499 IRX6P78412 446 aaPredicted RBP11.85□□□□□ -0.51
SYNJ1-203ENST00000382499 CPLX2Q6PUV4 134 aaKnown RBP11.85□□□□□ -0.51
SYNJ1-203ENST00000382499 NEBLO76041 1014 aa11.85□□□□□ -0.51
SYNJ1-203ENST00000382499 TEFQ10587 303 aa11.85□□□□□ -0.51
SYNJ1-203ENST00000382499 TRIM29Q14134 588 aa11.85□□□□□ -0.51
SYNJ1-203ENST00000382499 TOP2AP11388 1531 aaKnown RBP11.85□□□□□ -0.51
SYNJ1-203ENST00000382499 ERICH2A1L162 156 aa11.85□□□□□ -0.51
SYNJ1-203ENST00000382499 GRM1Q13255 1194 aa11.84□□□□□ -0.51
SYNJ1-203ENST00000382499 TERF2IPQ9NYB0 399 aa11.84□□□□□ -0.51
SYNJ1-203ENST00000382499 CADPSQ9ULU8 1353 aa11.84□□□□□ -0.51
SYNJ1-203ENST00000382499 CCDC70Q6NSX1 233 aa11.84□□□□□ -0.51
SYNJ1-203ENST00000382499 CCDC27Q2M243 656 aa11.83□□□□□ -0.51
SYNJ1-203ENST00000382499 NOP2P46087 812 aaKnown RBP11.83□□□□□ -0.52
SYNJ1-203ENST00000382499 CSPP1Q1MSJ5 1256 aa11.83□□□□□ -0.52
SYNJ1-203ENST00000382499 CLIP1P30622 1438 aa11.83□□□□□ -0.52
SYNJ1-203ENST00000382499 FYB1O15117 783 aa11.83□□□□□ -0.52
SYNJ1-203ENST00000382499 TRIM21P19474 475 aaKnown RBP11.83□□□□□ -0.52
SYNJ1-203ENST00000382499 RBM5P52756 815 aaKnown RBP eCLIP11.83□□□□□ -0.52
SYNJ1-203ENST00000382499 CRBNQ96SW2 442 aa11.83□□□□□ -0.52
SYNJ1-203ENST00000382499 CA8P35219 290 aa11.83□□□□□ -0.52
SYNJ1-203ENST00000382499 U2AF1L5P0DN76 240 aaPredicted RBP11.82□□□□□ -0.52
SYNJ1-203ENST00000382499 MSNP26038 577 aaKnown RBP11.82□□□□□ -0.52
SYNJ1-203ENST00000382499 U2AF1Q01081 240 aaKnown RBP eCLIP11.82□□□□□ -0.52
SYNJ1-203ENST00000382499 NAP1L5Q96NT1 182 aaPredicted RBP11.82□□□□□ -0.52
SYNJ1-203ENST00000382499 NESP48681 1621 aa11.82□□□□□ -0.52
SYNJ1-203ENST00000382499 WASHC2CQ9Y4E1 1318 aa11.82□□□□□ -0.52
SYNJ1-203ENST00000382499 HIRIP3Q9BW71 556 aaPredicted RBP11.81□□□□□ -0.52
SYNJ1-203ENST00000382499 H3BQV1 296 aa11.81□□□□□ -0.52
SYNJ1-203ENST00000382499 IFFO2Q5TF58 517 aa11.81□□□□□ -0.52
SYNJ1-203ENST00000382499 CHMP4BP1P59074 171 aa11.81□□□□□ -0.52
SYNJ1-203ENST00000382499 IPO7O95373 1038 aaKnown RBP11.8□□□□□ -0.52
SYNJ1-203ENST00000382499 LMOD3Q0VAK6 560 aa11.8□□□□□ -0.52
SYNJ1-203ENST00000382499 HSP90AB2PQ58FF8 381 aa11.8□□□□□ -0.52
SYNJ1-203ENST00000382499 EPS15P42566 896 aa11.8□□□□□ -0.52
SYNJ1-203ENST00000382499 CEP164Q9UPV0 1460 aa11.8□□□□□ -0.52
SYNJ1-203ENST00000382499 ANKRD20A12PQ8NF67 263 aa11.8□□□□□ -0.52
SYNJ1-203ENST00000382499 DCAF11Q8TEB1 546 aa11.8□□□□□ -0.52
SYNJ1-203ENST00000382499 SUPT16HQ9Y5B9 1047 aaKnown RBP11.8□□□□□ -0.52
SYNJ1-203ENST00000382499 FAM184AQ8NB25 1140 aa11.79□□□□□ -0.52
SYNJ1-203ENST00000382499 KIF16BQ96L93 1317 aa11.79□□□□□ -0.52
SYNJ1-203ENST00000382499 SYAP1Q96A49 352 aaPredicted RBP11.79□□□□□ -0.52
SYNJ1-203ENST00000382499 CCNB3Q8WWL7 1395 aa11.79□□□□□ -0.52
SYNJ1-203ENST00000382499 TRDNQ13061 729 aa11.79□□□□□ -0.52
SYNJ1-203ENST00000382499 MTMR7Q9Y216 660 aa11.79□□□□□ -0.52
SYNJ1-203ENST00000382499 DRC1Q96MC2 740 aa11.78□□□□□ -0.52
SYNJ1-203ENST00000382499 PDE3BQ13370 1112 aa11.78□□□□□ -0.52
SYNJ1-203ENST00000382499 NFXL1Q6ZNB6 911 aa11.78□□□□□ -0.52
SYNJ1-203ENST00000382499 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.78□□□□□ -0.52
SYNJ1-203ENST00000382499 BEGAINQ9BUH8 593 aa11.78□□□□□ -0.52
SYNJ1-203ENST00000382499 ITPRIPQ8IWB1 547 aa11.78□□□□□ -0.52
SYNJ1-203ENST00000382499 DNAI2Q9GZS0 605 aa11.77□□□□□ -0.53
SYNJ1-203ENST00000382499 RAPGEF4Q8WZA2 1011 aa11.77□□□□□ -0.53
SYNJ1-203ENST00000382499 EFCAB2Q5VUJ9 269 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms