RNA–Protein interactions for RNA: ENST00000382203.5

SMARCA2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCA2, Length 5,867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-209ENST00000382203 WWC1Q8IX03 1113 aa15.18■□□□□ 0.02
SMARCA2-209ENST00000382203 KIF16BQ96L93 1317 aa15.18■□□□□ 0.02
SMARCA2-209ENST00000382203 IPO8O15397 1037 aaKnown RBP15.17■□□□□ 0.02
SMARCA2-209ENST00000382203 RSPH4AQ5TD94 716 aa15.17■□□□□ 0.02
SMARCA2-209ENST00000382203 ERCC4Q92889 916 aaPredicted RBP15.17■□□□□ 0.02
SMARCA2-209ENST00000382203 GOLGA6L7A0A1B0GV03 622 aa15.16■□□□□ 0.02
SMARCA2-209ENST00000382203 ZNF526Q8TF50 670 aaPredicted RBP15.16■□□□□ 0.02
SMARCA2-209ENST00000382203 KIAA0754O94854 1291 aa15.16■□□□□ 0.02
SMARCA2-209ENST00000382203 SOX12O15370 315 aa15.16■□□□□ 0.02
SMARCA2-209ENST00000382203 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.15■□□□□ 0.02
SMARCA2-209ENST00000382203 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.15■□□□□ 0.02
SMARCA2-209ENST00000382203 APBB1O00213 710 aa15.14■□□□□ 0.01
SMARCA2-209ENST00000382203 FOXD4L5Q5VV16 416 aaPredicted RBP15.14■□□□□ 0.01
SMARCA2-209ENST00000382203 FOXD4L4Q8WXT5 416 aaPredicted RBP15.14■□□□□ 0.01
SMARCA2-209ENST00000382203 EEA1Q15075 1411 aa15.14■□□□□ 0.01
SMARCA2-209ENST00000382203 HDGFL2Q7Z4V5 671 aaPredicted RBP15.14■□□□□ 0.01
SMARCA2-209ENST00000382203 GPATCH3Q96I76 525 aa15.14■□□□□ 0.01
SMARCA2-209ENST00000382203 IFT57Q9NWB7 429 aa15.14■□□□□ 0.01
SMARCA2-209ENST00000382203 RBM25P49756 843 aaKnown RBP15.13■□□□□ 0.01
SMARCA2-209ENST00000382203 RBM10P98175 930 aaKnown RBP15.13■□□□□ 0.01
SMARCA2-209ENST00000382203 RWDD1Q9H446 243 aaPredicted RBP15.12■□□□□ 0.01
SMARCA2-209ENST00000382203 NOL8Q76FK4 1167 aaKnown RBP15.12■□□□□ 0.01
SMARCA2-209ENST00000382203 CHMP4AQ9BY43 222 aa15.12■□□□□ 0.01
SMARCA2-209ENST00000382203 CSB-PGBD3P0DP91 1061 aa15.11■□□□□ 0.01
SMARCA2-209ENST00000382203 GORABQ5T7V8 394 aa15.11■□□□□ 0.01
SMARCA2-209ENST00000382203 ST18O60284 1047 aa15.1■□□□□ 0.01
SMARCA2-209ENST00000382203 RRP9O43818 475 aaKnown RBP15.1■□□□□ 0.01
SMARCA2-209ENST00000382203 SKIDA1Q1XH10 827 aa15.1■□□□□ 0.01
SMARCA2-209ENST00000382203 AXDND1Q5T1B0 1012 aaPredicted RBP15.1■□□□□ 0.01
SMARCA2-209ENST00000382203 CCNB3Q8WWL7 1395 aa15.1■□□□□ 0.01
SMARCA2-209ENST00000382203 G3V3G9 751 aa15.09■□□□□ 0.01
SMARCA2-209ENST00000382203 DCAF8Q5TAQ9 597 aa15.09■□□□□ 0.01
SMARCA2-209ENST00000382203 BCL11BQ9C0K0 894 aaPredicted RBP15.09■□□□□ 0.01
SMARCA2-209ENST00000382203 BCCIPQ9P287 314 aaKnown RBP eCLIP15.09■□□□□ 0.01
SMARCA2-209ENST00000382203 DHX37Q8IY37 1157 aaKnown RBP15.09■□□□□ 0.01
SMARCA2-209ENST00000382203 ATP6V1DQ9Y5K8 247 aa15.09■□□□□ 0.01
SMARCA2-209ENST00000382203 CEP162Q5TB80 1403 aa15.09■□□□□ 0.01
SMARCA2-209ENST00000382203 GPATCH11Q8N954 259 aa15.09■□□□□ 0.01
SMARCA2-209ENST00000382203 ZNF330Q9Y3S2 320 aaPredicted RBP15.09■□□□□ 0.01
SMARCA2-209ENST00000382203 PCMTD1Q96MG8 357 aaPredicted RBP15.08■□□□□ 0
SMARCA2-209ENST00000382203 DCAF11Q8TEB1 546 aa15.08■□□□□ 0
SMARCA2-209ENST00000382203 CT47B1P0C2W7 299 aaPredicted RBP15.07■□□□□ 0
SMARCA2-209ENST00000382203 HDAC5Q9UQL6 1122 aa15.07■□□□□ 0
SMARCA2-209ENST00000382203 CLASRPQ8N2M8 674 aaKnown RBP15.07■□□□□ 0
SMARCA2-209ENST00000382203 HMGN5P82970 282 aaKnown RBP15.06■□□□□ 0
SMARCA2-209ENST00000382203 ITPRIPQ8IWB1 547 aa15.06■□□□□ 0
SMARCA2-209ENST00000382203 ANKRD20A12PQ8NF67 263 aa15.06■□□□□ 0
SMARCA2-209ENST00000382203 KTN1Q86UP2 1357 aaKnown RBP15.06■□□□□ 0
SMARCA2-209ENST00000382203 PAK3O75914 559 aaPredicted RBP15.05■□□□□ 0
SMARCA2-209ENST00000382203 TRHP20396 242 aaPredicted RBP15.05■□□□□ 0
SMARCA2-209ENST00000382203 MLECQ14165 292 aa15.05■□□□□ 0
SMARCA2-209ENST00000382203 IPO4Q8TEX9 1081 aaKnown RBP15.05■□□□□ 0
SMARCA2-209ENST00000382203 CENPHQ9H3R5 247 aa15.05■□□□□ 0
SMARCA2-209ENST00000382203 CHMP3Q9Y3E7 222 aa15.04■□□□□ -0
SMARCA2-209ENST00000382203 SLC4A3P48751 1232 aa15.04■□□□□ -0
SMARCA2-209ENST00000382203 CCDC173Q0VFZ6 552 aa15.04■□□□□ -0
SMARCA2-209ENST00000382203 KIF27Q86VH2 1401 aa15.04■□□□□ -0
SMARCA2-209ENST00000382203 SPAG9O60271 1321 aaKnown RBP15.04■□□□□ -0
SMARCA2-209ENST00000382203 CCDC39Q9UFE4 941 aa15.04■□□□□ -0
SMARCA2-209ENST00000382203 ERCC6Q03468 1493 aa15.03■□□□□ -0
SMARCA2-209ENST00000382203 MARCH6O60337 910 aa15.03■□□□□ -0
SMARCA2-209ENST00000382203 SAFB2Q14151 953 aaKnown RBP eCLIP15.03■□□□□ -0
SMARCA2-209ENST00000382203 RALBP1Q15311 655 aa15.03■□□□□ -0
SMARCA2-209ENST00000382203 STK31Q9BXU1 1019 aa15.03■□□□□ -0
SMARCA2-209ENST00000382203 CLGNO14967 610 aa15.03■□□□□ -0
SMARCA2-209ENST00000382203 H3BQV1 296 aa15.02■□□□□ -0
SMARCA2-209ENST00000382203 NAP1L1P55209 391 aaKnown RBP15.02■□□□□ -0
SMARCA2-209ENST00000382203 IFFO2Q5TF58 517 aa15.02■□□□□ -0
SMARCA2-209ENST00000382203 PMFBP1Q8TBY8 1022 aa15.02■□□□□ -0
SMARCA2-209ENST00000382203 TNNT1P13805 278 aa15.02■□□□□ -0
SMARCA2-209ENST00000382203 FOXD4L6Q3SYB3 417 aaPredicted RBP15.02□□□□□ -0.01
SMARCA2-209ENST00000382203 FOXD4L3Q6VB84 417 aaPredicted RBP15.02□□□□□ -0.01
SMARCA2-209ENST00000382203 CAGE1Q8TC20 777 aa15.02□□□□□ -0.01
SMARCA2-209ENST00000382203 TICAM2Q86XR7 235 aa15.01□□□□□ -0.01
SMARCA2-209ENST00000382203 CCDC9Q9Y3X0 531 aaKnown RBP15.01□□□□□ -0.01
SMARCA2-209ENST00000382203 VPS53Q5VIR6 699 aa15.01□□□□□ -0.01
SMARCA2-209ENST00000382203 ERICH4A6NGS2 130 aa15.01□□□□□ -0.01
SMARCA2-209ENST00000382203 SIN3AQ96ST3 1273 aa15.01□□□□□ -0.01
SMARCA2-209ENST00000382203 MYO6Q9UM54 1294 aa15□□□□□ -0.01
SMARCA2-209ENST00000382203 TRIM6-TRIM34B2RNG4 842 aa15□□□□□ -0.01
SMARCA2-209ENST00000382203 STK26Q9P289 416 aa14.99□□□□□ -0.01
SMARCA2-209ENST00000382203 MRE11P49959 708 aa14.99□□□□□ -0.01
SMARCA2-209ENST00000382203 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.99□□□□□ -0.016e-6■■■■■ 56.9
SMARCA2-209ENST00000382203 CEP164Q9UPV0 1460 aa14.99□□□□□ -0.01
SMARCA2-209ENST00000382203 NF2P35240 595 aa14.98□□□□□ -0.01
SMARCA2-209ENST00000382203 BBXQ8WY36 941 aaPredicted RBP14.98□□□□□ -0.01
SMARCA2-209ENST00000382203 RCAN3Q9UKA8 241 aa14.98□□□□□ -0.01
SMARCA2-209ENST00000382203 CCER2I3L3R5 266 aa14.97□□□□□ -0.01
SMARCA2-209ENST00000382203 U2AF1L5P0DN76 240 aaPredicted RBP14.97□□□□□ -0.01
SMARCA2-209ENST00000382203 U2AF1Q01081 240 aaKnown RBP eCLIP14.97□□□□□ -0.01
SMARCA2-209ENST00000382203 FAM184AQ8NB25 1140 aa14.97□□□□□ -0.01
SMARCA2-209ENST00000382203 EIF4G1Q04637 1599 aaKnown RBP14.96□□□□□ -0.01
SMARCA2-209ENST00000382203 EIF3AQ14152 1382 aaKnown RBP14.96□□□□□ -0.01
SMARCA2-209ENST00000382203 CT47A1Q5JQC4 288 aaPredicted RBP14.96□□□□□ -0.01
SMARCA2-209ENST00000382203 IL27Q8NEV9 243 aa14.96□□□□□ -0.01
SMARCA2-209ENST00000382203 IBSPP21815 317 aaPredicted RBP14.96□□□□□ -0.02
SMARCA2-209ENST00000382203 KRI1Q8N9T8 703 aaKnown RBP14.95□□□□□ -0.02
SMARCA2-209ENST00000382203 FANCIQ9NVI1 1328 aa14.95□□□□□ -0.02
SMARCA2-209ENST00000382203 CCAR1Q8IX12 1150 aaKnown RBP14.95□□□□□ -0.02
SMARCA2-209ENST00000382203 GOLGA6L10A6NI86 522 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms