RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 SAMD9Q5K651 1589 aa19.24■□□□□ 0.67
VLDLR-202ENST00000382099 MYOM3Q5VTT5 1437 aa19.24■□□□□ 0.67
VLDLR-202ENST00000382099 CENPQQ7L2Z9 268 aaPredicted RBP19.24■□□□□ 0.67
VLDLR-202ENST00000382099 GTF2E1P29083 439 aaPredicted RBP19.23■□□□□ 0.67
VLDLR-202ENST00000382099 GRIN2BQ13224 1484 aa19.23■□□□□ 0.67
VLDLR-202ENST00000382099 NCOA1Q15788 1441 aa19.23■□□□□ 0.67
VLDLR-202ENST00000382099 DENND4BO75064 1496 aaPredicted RBP19.22■□□□□ 0.67
VLDLR-202ENST00000382099 MCM4P33991 863 aa19.22■□□□□ 0.67
VLDLR-202ENST00000382099 TNNT2P45379 298 aaPredicted RBP19.21■□□□□ 0.67
VLDLR-202ENST00000382099 ZNF326Q5BKZ1 582 aaKnown RBP19.21■□□□□ 0.67
VLDLR-202ENST00000382099 MSNP26038 577 aaKnown RBP19.21■□□□□ 0.67
VLDLR-202ENST00000382099 PAXIP1Q6ZW49 1069 aaPredicted RBP19.21■□□□□ 0.67
VLDLR-202ENST00000382099 MAP7D2Q96T17 732 aa19.21■□□□□ 0.67
VLDLR-202ENST00000382099 SMAP1Q8IYB5 467 aaPredicted RBP19.2■□□□□ 0.66
VLDLR-202ENST00000382099 ANP32BQ92688 251 aaKnown RBP19.2■□□□□ 0.66
VLDLR-202ENST00000382099 RIPK4P57078 832 aa19.2■□□□□ 0.66
VLDLR-202ENST00000382099 MAGI3Q5TCQ9 1506 aa19.2■□□□□ 0.66
VLDLR-202ENST00000382099 PLCD3Q8N3E9 789 aa19.19■□□□□ 0.66
VLDLR-202ENST00000382099 SUPT6HQ7KZ85 1726 aaKnown RBP19.18■□□□□ 0.66
VLDLR-202ENST00000382099 FBLN2P98095 1184 aa19.18■□□□□ 0.66
VLDLR-202ENST00000382099 STAC3Q96MF2 364 aa19.18■□□□□ 0.66
VLDLR-202ENST00000382099 NCLP19338 710 aaKnown RBP19.18■□□□□ 0.66
VLDLR-202ENST00000382099 KDM6BO15054 1643 aa19.18■□□□□ 0.66
VLDLR-202ENST00000382099 VGLL3A8MV65 326 aa19.17■□□□□ 0.66
VLDLR-202ENST00000382099 TAF7LQ5H9L4 462 aa19.17■□□□□ 0.66
VLDLR-202ENST00000382099 UGGT2Q9NYU1 1516 aa19.15■□□□□ 0.66
VLDLR-202ENST00000382099 URB2Q14146 1524 aaKnown RBP19.15■□□□□ 0.66
VLDLR-202ENST00000382099 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.15■□□□□ 0.66
VLDLR-202ENST00000382099 SEC24BO95487 1268 aa19.15■□□□□ 0.66
VLDLR-202ENST00000382099 ARHGEF11O15085 1522 aa19.14■□□□□ 0.66
VLDLR-202ENST00000382099 EHBP1L1Q8N3D4 1523 aa19.14■□□□□ 0.66
VLDLR-202ENST00000382099 UPF2Q9HAU5 1272 aaKnown RBP19.14■□□□□ 0.65
VLDLR-202ENST00000382099 ABCA5Q8WWZ7 1642 aa19.13■□□□□ 0.65
VLDLR-202ENST00000382099 UQCRHLA0A096LP55 91 aa19.13■□□□□ 0.65
VLDLR-202ENST00000382099 UQCRHP07919 91 aa19.13■□□□□ 0.65
VLDLR-202ENST00000382099 KDM2BQ8NHM5 1336 aa19.12■□□□□ 0.65
VLDLR-202ENST00000382099 NBPF8Q3BBV2 869 aa19.12■□□□□ 0.65
VLDLR-202ENST00000382099 THOC2Q8NI27 1593 aaKnown RBP19.11■□□□□ 0.65
VLDLR-202ENST00000382099 ZBTB7CA1YPR0 619 aa19.11■□□□□ 0.65
VLDLR-202ENST00000382099 GCC2Q8IWJ2 1684 aa19.11■□□□□ 0.65
VLDLR-202ENST00000382099 HECW1Q76N89 1606 aa19.11■□□□□ 0.65
VLDLR-202ENST00000382099 PDE3BQ13370 1112 aa19.1■□□□□ 0.65
VLDLR-202ENST00000382099 OFD1O75665 1012 aa19.1■□□□□ 0.65
VLDLR-202ENST00000382099 ZNF777Q9ULD5 760 aaPredicted RBP19.1■□□□□ 0.65
VLDLR-202ENST00000382099 ANTXR1Q9H6X2 564 aa19.09■□□□□ 0.65
VLDLR-202ENST00000382099 MAPK8IP2Q13387 824 aaPredicted RBP19.09■□□□□ 0.65
VLDLR-202ENST00000382099 PPP4R3BQ5MIZ7 849 aa19.08■□□□□ 0.65
VLDLR-202ENST00000382099 ZSCAN30Q86W11 494 aa19.08■□□□□ 0.64
VLDLR-202ENST00000382099 TBC1D2Q9BYX2 928 aa19.08■□□□□ 0.64
VLDLR-202ENST00000382099 TCOF1Q13428 1488 aaKnown RBP19.08■□□□□ 0.64
VLDLR-202ENST00000382099 GAPVD1Q14C86 1478 aa19.08■□□□□ 0.64
VLDLR-202ENST00000382099 CDK11BP21127 795 aaKnown RBP19.06■□□□□ 0.64
VLDLR-202ENST00000382099 USP19O94966 1318 aa19.06■□□□□ 0.64
VLDLR-202ENST00000382099 DHX29Q7Z478 1369 aaKnown RBP19.06■□□□□ 0.64
VLDLR-202ENST00000382099 LAMC3Q9Y6N6 1575 aa19.05■□□□□ 0.64
VLDLR-202ENST00000382099 DMTNQ08495 405 aa19.04■□□□□ 0.64
VLDLR-202ENST00000382099 GAS2L3Q86XJ1 694 aa19.04■□□□□ 0.64
VLDLR-202ENST00000382099 XPCQ01831 940 aaPredicted RBP19.04■□□□□ 0.64
VLDLR-202ENST00000382099 IPO4Q8TEX9 1081 aaKnown RBP19.04■□□□□ 0.64
VLDLR-202ENST00000382099 MPHOSPH9Q99550 1183 aa19.03■□□□□ 0.64
VLDLR-202ENST00000382099 CHMP5Q9NZZ3 219 aa19.02■□□□□ 0.64
VLDLR-202ENST00000382099 CBX1P83916 185 aa19.02■□□□□ 0.63
VLDLR-202ENST00000382099 MTERF4Q7Z6M4 381 aaKnown RBP19.02■□□□□ 0.63
VLDLR-202ENST00000382099 KIF21AQ7Z4S6 1674 aa19.01■□□□□ 0.63
VLDLR-202ENST00000382099 ZNF644Q9H582 1327 aaPredicted RBP19.01■□□□□ 0.63
VLDLR-202ENST00000382099 DDX11L8A8MPP1 907 aa19■□□□□ 0.63
VLDLR-202ENST00000382099 NASPP49321 788 aaPredicted RBP19■□□□□ 0.63
VLDLR-202ENST00000382099 CDK13Q14004 1512 aaKnown RBP19■□□□□ 0.63
VLDLR-202ENST00000382099 CCDC173Q0VFZ6 552 aa18.99■□□□□ 0.63
VLDLR-202ENST00000382099 MYBBP1AQ9BQG0 1328 aaKnown RBP18.99■□□□□ 0.63
VLDLR-202ENST00000382099 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.99■□□□□ 0.63
VLDLR-202ENST00000382099 UTP14CQ5TAP6 766 aaKnown RBP18.98■□□□□ 0.63
VLDLR-202ENST00000382099 EPRSP07814 1512 aaKnown RBP18.97■□□□□ 0.63
VLDLR-202ENST00000382099 ISY1Q9ULR0 285 aaKnown RBP18.96■□□□□ 0.63
VLDLR-202ENST00000382099 ZSCAN20P17040 1043 aaPredicted RBP18.96■□□□□ 0.63
VLDLR-202ENST00000382099 ZNF830Q96NB3 372 aaPredicted RBP18.96■□□□□ 0.63
VLDLR-202ENST00000382099 TMEM51Q9NW97 253 aa18.95■□□□□ 0.62
VLDLR-202ENST00000382099 CCDC94Q9BW85 323 aaPredicted RBP18.95■□□□□ 0.62
VLDLR-202ENST00000382099 IGSF3O75054 1194 aa18.95■□□□□ 0.62
VLDLR-202ENST00000382099 LRPPRCP42704 1394 aaKnown RBP18.94■□□□□ 0.62
VLDLR-202ENST00000382099 DNTTIP2Q5QJE6 756 aaKnown RBP18.94■□□□□ 0.62
VLDLR-202ENST00000382099 BRD4O60885 1362 aaPredicted RBP18.93■□□□□ 0.62
VLDLR-202ENST00000382099 ZBTB22O15209 634 aa18.93■□□□□ 0.62
VLDLR-202ENST00000382099 TERF1P54274 439 aa18.93■□□□□ 0.62
VLDLR-202ENST00000382099 TEX14Q8IWB6 1497 aa18.93■□□□□ 0.62
VLDLR-202ENST00000382099 DYNC1I1O14576 645 aa18.93■□□□□ 0.62
VLDLR-202ENST00000382099 CGNQ9P2M7 1197 aaKnown RBP18.93■□□□□ 0.62
VLDLR-202ENST00000382099 ANKRD30BQ9BXX2 1392 aa18.92■□□□□ 0.62
VLDLR-202ENST00000382099 TARBP1Q13395 1621 aaKnown RBP18.92■□□□□ 0.62
VLDLR-202ENST00000382099 MIA2Q96PC5 1412 aa18.91■□□□□ 0.62
VLDLR-202ENST00000382099 KIF15Q9NS87 1388 aa18.91■□□□□ 0.62
VLDLR-202ENST00000382099 RALBP1Q15311 655 aa18.91■□□□□ 0.62
VLDLR-202ENST00000382099 RPRD2Q5VT52 1461 aaKnown RBP18.91■□□□□ 0.62
VLDLR-202ENST00000382099 SPATA31E1Q6ZUB1 1445 aa18.9■□□□□ 0.62
VLDLR-202ENST00000382099 IGHDP01880 384 aa18.9■□□□□ 0.62
VLDLR-202ENST00000382099 WDR62O43379 1518 aa18.9■□□□□ 0.62
VLDLR-202ENST00000382099 NLRP13Q86W25 1043 aa18.89■□□□□ 0.62
VLDLR-202ENST00000382099 HSCBQ8IWL3 235 aa18.89■□□□□ 0.61
VLDLR-202ENST00000382099 PDS5BQ9NTI5 1447 aa18.88■□□□□ 0.61
VLDLR-202ENST00000382099 TBC1D32Q96NH3 1257 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms