RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 CPSF2Q9P2I0 782 aaKnown RBP7.3□□□□□ -1.24
SCN2A-202ENST00000375427 GBP2P32456 591 aaPredicted RBP7.3□□□□□ -1.24
SCN2A-202ENST00000375427 HOMER1Q86YM7 354 aa7.3□□□□□ -1.24
SCN2A-202ENST00000375427 MKL2Q9ULH7 1088 aa7.3□□□□□ -1.24
SCN2A-202ENST00000375427 SMC1AQ14683 1233 aaKnown RBP7.29□□□□□ -1.24
SCN2A-202ENST00000375427 IRX3P78415 501 aaPredicted RBP7.29□□□□□ -1.24
SCN2A-202ENST00000375427 AEBP1Q8IUX7 1158 aa7.29□□□□□ -1.24
SCN2A-202ENST00000375427 RBM28Q9NW13 759 aaKnown RBP7.29□□□□□ -1.24
SCN2A-202ENST00000375427 OFD1O75665 1012 aa7.29□□□□□ -1.24
SCN2A-202ENST00000375427 RBM25P49756 843 aaKnown RBP7.29□□□□□ -1.24
SCN2A-202ENST00000375427 CCDC91Q7Z6B0 441 aa7.29□□□□□ -1.24
SCN2A-202ENST00000375427 CNKSR2Q8WXI2 1034 aa7.29□□□□□ -1.24
SCN2A-202ENST00000375427 ODF2Q5BJF6 829 aa7.28□□□□□ -1.24
SCN2A-202ENST00000375427 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.28□□□□□ -1.24
SCN2A-202ENST00000375427 V9GYY5 206 aaPredicted RBP7.28□□□□□ -1.24
SCN2A-202ENST00000375427 WDR78Q5VTH9 848 aa7.28□□□□□ -1.24
SCN2A-202ENST00000375427 CFAP53Q96M91 514 aa7.28□□□□□ -1.24
SCN2A-202ENST00000375427 SEPT7Q16181 437 aaKnown RBP7.28□□□□□ -1.24
SCN2A-202ENST00000375427 GOLIM4O00461 696 aa7.28□□□□□ -1.24
SCN2A-202ENST00000375427 GSE1Q14687 1217 aa7.28□□□□□ -1.24
SCN2A-202ENST00000375427 GPATCH11Q8N954 259 aa7.28□□□□□ -1.24
SCN2A-202ENST00000375427 TPD52L1Q16890 204 aaPredicted RBP7.28□□□□□ -1.24
SCN2A-202ENST00000375427 ZC4H2Q9NQZ6 224 aa7.28□□□□□ -1.24
SCN2A-202ENST00000375427 CCDC112Q8NEF3 446 aa7.28□□□□□ -1.24
SCN2A-202ENST00000375427 KIF3BO15066 747 aa7.27□□□□□ -1.25
SCN2A-202ENST00000375427 STAMBPO95630 424 aa7.27□□□□□ -1.25
SCN2A-202ENST00000375427 PDIA4P13667 645 aaKnown RBP7.27□□□□□ -1.25
SCN2A-202ENST00000375427 NUCB2P80303 420 aa7.27□□□□□ -1.25
SCN2A-202ENST00000375427 DDX11L8A8MPP1 907 aa7.27□□□□□ -1.25
SCN2A-202ENST00000375427 TRIM35Q9UPQ4 493 aa7.27□□□□□ -1.25
SCN2A-202ENST00000375427 GZF1Q9H116 711 aaPredicted RBP7.27□□□□□ -1.25
SCN2A-202ENST00000375427 FLIIQ13045 1269 aa7.26□□□□□ -1.25
SCN2A-202ENST00000375427 ERC1Q8IUD2 1116 aa7.26□□□□□ -1.25
SCN2A-202ENST00000375427 BMS1Q14692 1282 aaKnown RBP7.26□□□□□ -1.25
SCN2A-202ENST00000375427 CCDC6Q16204 474 aa7.26□□□□□ -1.25
SCN2A-202ENST00000375427 LETM1O95202 739 aaPredicted RBP7.26□□□□□ -1.25
SCN2A-202ENST00000375427 FAM9BQ8IZU0 186 aa7.26□□□□□ -1.25
SCN2A-202ENST00000375427 CT47B1P0C2W7 299 aaPredicted RBP7.26□□□□□ -1.25
SCN2A-202ENST00000375427 PPFIBP2Q8ND30 876 aa7.26□□□□□ -1.25
SCN2A-202ENST00000375427 MRVI1Q9Y6F6 885 aa7.26□□□□□ -1.25
SCN2A-202ENST00000375427 MBD3O95983 291 aa7.26□□□□□ -1.25
SCN2A-202ENST00000375427 KIAA1328Q86T90 577 aa7.26□□□□□ -1.25
SCN2A-202ENST00000375427 ZNF592Q92610 1267 aa7.26□□□□□ -1.25
SCN2A-202ENST00000375427 ZNF622Q969S3 477 aaKnown RBP eCLIP7.26□□□□□ -1.25
SCN2A-202ENST00000375427 TICAM2Q86XR7 235 aa7.25□□□□□ -1.25
SCN2A-202ENST00000375427 SLC26A8Q96RN1 970 aa7.25□□□□□ -1.25
SCN2A-202ENST00000375427 SRPK2P78362 688 aaKnown RBP7.25□□□□□ -1.25
SCN2A-202ENST00000375427 IPO9Q96P70 1041 aaKnown RBP7.25□□□□□ -1.25
SCN2A-202ENST00000375427 ZNHIT6Q9NWK9 470 aaKnown RBP7.25□□□□□ -1.25
SCN2A-202ENST00000375427 ANKRD20A12PQ8NF67 263 aa7.25□□□□□ -1.25
SCN2A-202ENST00000375427 PRPF31Q8WWY3 499 aaKnown RBP7.25□□□□□ -1.25
SCN2A-202ENST00000375427 ERLIN2O94905 339 aa7.25□□□□□ -1.25
SCN2A-202ENST00000375427 NPHP1O15259 732 aa7.24□□□□□ -1.25
SCN2A-202ENST00000375427 ZBTB17Q13105 803 aa7.24□□□□□ -1.25
SCN2A-202ENST00000375427 WWC1Q8IX03 1113 aa7.24□□□□□ -1.25
SCN2A-202ENST00000375427 CT47A1Q5JQC4 288 aaPredicted RBP7.24□□□□□ -1.25
SCN2A-202ENST00000375427 CENPHQ9H3R5 247 aa7.24□□□□□ -1.25
SCN2A-202ENST00000375427 RABEP1Q15276 862 aa7.24□□□□□ -1.25
SCN2A-202ENST00000375427 FAM107BQ9H098 131 aa7.24□□□□□ -1.25
SCN2A-202ENST00000375427 CCDC174Q6PII3 467 aa7.23□□□□□ -1.25
SCN2A-202ENST00000375427 SMC6Q96SB8 1091 aa7.23□□□□□ -1.25
SCN2A-202ENST00000375427 TNNT1P13805 278 aa7.23□□□□□ -1.25
SCN2A-202ENST00000375427 MICALCLQ6ZW33 695 aa7.23□□□□□ -1.25
SCN2A-202ENST00000375427 KIAA1211Q6ZU35 1233 aa7.23□□□□□ -1.25
SCN2A-202ENST00000375427 CCDC146Q8IYE0 955 aa7.23□□□□□ -1.25
SCN2A-202ENST00000375427 GRIPAP1Q4V328 841 aa7.22□□□□□ -1.25
SCN2A-202ENST00000375427 IPO4Q8TEX9 1081 aaKnown RBP7.22□□□□□ -1.25
SCN2A-202ENST00000375427 NASPP49321 788 aaPredicted RBP7.22□□□□□ -1.25
SCN2A-202ENST00000375427 MAPK8IP2Q13387 824 aaPredicted RBP7.22□□□□□ -1.25
SCN2A-202ENST00000375427 HSP90AB2PQ58FF8 381 aa7.22□□□□□ -1.25
SCN2A-202ENST00000375427 PMFBP1Q8TBY8 1022 aa7.22□□□□□ -1.25
SCN2A-202ENST00000375427 SALL2Q9Y467 1007 aaPredicted RBP7.22□□□□□ -1.25
SCN2A-202ENST00000375427 PPP4R4Q6NUP7 873 aa7.22□□□□□ -1.25
SCN2A-202ENST00000375427 CFAP45Q9UL16 551 aa7.22□□□□□ -1.25
SCN2A-202ENST00000375427 ANKRD62A6NC57 917 aa7.22□□□□□ -1.25
SCN2A-202ENST00000375427 SARNPP82979 210 aaKnown RBP7.22□□□□□ -1.25
SCN2A-202ENST00000375427 A0A0G2JS52 829 aa7.22□□□□□ -1.25
SCN2A-202ENST00000375427 NAP1L3Q99457 506 aaPredicted RBP7.22□□□□□ -1.25
SCN2A-202ENST00000375427 FEZ2Q9UHY8 353 aaPredicted RBP7.22□□□□□ -1.25
SCN2A-202ENST00000375427 SUPT16HQ9Y5B9 1047 aaKnown RBP7.22□□□□□ -1.25
SCN2A-202ENST00000375427 PDCL2Q8N4E4 241 aa7.22□□□□□ -1.25
SCN2A-202ENST00000375427 POLR3GO15318 223 aaPredicted RBP7.21□□□□□ -1.25
SCN2A-202ENST00000375427 MS4A1P11836 297 aa7.21□□□□□ -1.25
SCN2A-202ENST00000375427 ANO8Q9HCE9 1232 aaPredicted RBP7.21□□□□□ -1.26
SCN2A-202ENST00000375427 BAZ2BQ9UIF8 2168 aaKnown RBP7.21□□□□□ -1.26
SCN2A-202ENST00000375427 TDO2P48775 406 aa7.21□□□□□ -1.26
SCN2A-202ENST00000375427 C10orf67Q8IYJ2 551 aa7.21□□□□□ -1.26
SCN2A-202ENST00000375427 LUZP1Q86V48 1076 aa7.21□□□□□ -1.26
SCN2A-202ENST00000375427 BECN2A8MW95 431 aa7.21□□□□□ -1.26
SCN2A-202ENST00000375427 DDX46Q7L014 1031 aaKnown RBP7.21□□□□□ -1.26
SCN2A-202ENST00000375427 MIPOL1Q8TD10 442 aa7.21□□□□□ -1.26
SCN2A-202ENST00000375427 MYO10Q9HD67 2058 aa7.2□□□□□ -1.26
SCN2A-202ENST00000375427 FAM43AQ8N2R8 423 aa7.2□□□□□ -1.26
SCN2A-202ENST00000375427 HIRIP3Q9BW71 556 aaPredicted RBP7.2□□□□□ -1.26
SCN2A-202ENST00000375427 ANKRD18BA2A2Z9 1011 aa7.2□□□□□ -1.26
SCN2A-202ENST00000375427 SMARCE1Q969G3 411 aa7.2□□□□□ -1.26
SCN2A-202ENST00000375427 TIGD1Q96MW7 591 aa7.2□□□□□ -1.26
SCN2A-202ENST00000375427 BRD2P25440 801 aaKnown RBP7.2□□□□□ -1.26
SCN2A-202ENST00000375427 GCOM1H8Y6P7 765 aaPredicted RBP7.2□□□□□ -1.26
SCN2A-202ENST00000375427 MYZAPP0CAP1 466 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms