RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 ADCY10Q96PN6 1610 aa23.11■■□□□ 1.29
VEGFA-205ENST00000372067 PLEKHH2Q8IVE3 1493 aa23.1■■□□□ 1.29
VEGFA-205ENST00000372067 MBD5Q9P267 1494 aa23.09■■□□□ 1.29
VEGFA-205ENST00000372067 SHANK2Q9UPX8 1470 aa23.08■■□□□ 1.29
VEGFA-205ENST00000372067 ABCC2Q92887 1545 aa23.07■■□□□ 1.28
VEGFA-205ENST00000372067 SENP3Q9H4L4 574 aaPredicted RBP23.05■■□□□ 1.28
VEGFA-205ENST00000372067 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.05■■□□□ 1.28
VEGFA-205ENST00000372067 SAMD9LQ8IVG5 1584 aa23.04■■□□□ 1.28
VEGFA-205ENST00000372067 CC2D1BQ5T0F9 858 aaKnown RBP23.03■■□□□ 1.28
VEGFA-205ENST00000372067 OSCARQ8IYS5 282 aa23.03■■□□□ 1.28
VEGFA-205ENST00000372067 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.03■■□□□ 1.281e-6■■□□□ 12.4
VEGFA-205ENST00000372067 TTC37Q6PGP7 1564 aa23.02■■□□□ 1.28
VEGFA-205ENST00000372067 FAM135AQ9P2D6 1515 aa23■■□□□ 1.27
VEGFA-205ENST00000372067 GGT6Q6P531 493 aa22.99■■□□□ 1.27
VEGFA-205ENST00000372067 PLCH2O75038 1416 aa22.99■■□□□ 1.27
VEGFA-205ENST00000372067 TRAPPC8Q9Y2L5 1435 aa22.99■■□□□ 1.27
VEGFA-205ENST00000372067 CROCC2H7BZ55 1655 aa22.98■■□□□ 1.27
VEGFA-205ENST00000372067 KANK1Q14678 1352 aa22.97■■□□□ 1.27
VEGFA-205ENST00000372067 FANCIQ9NVI1 1328 aa22.97■■□□□ 1.27
VEGFA-205ENST00000372067 SCAPERQ9BY12 1400 aa22.96■■□□□ 1.27
VEGFA-205ENST00000372067 SPATA31E1Q6ZUB1 1445 aa22.95■■□□□ 1.26
VEGFA-205ENST00000372067 ARHGEF5Q12774 1597 aa22.94■■□□□ 1.26
VEGFA-205ENST00000372067 TMF1P82094 1093 aa22.94■■□□□ 1.26
VEGFA-205ENST00000372067 PREX2Q70Z35 1606 aa22.94■■□□□ 1.26
VEGFA-205ENST00000372067 ERICH6BQ5W0A0 696 aa22.94■■□□□ 1.26
VEGFA-205ENST00000372067 CDC42BPBQ9Y5S2 1711 aa22.93■■□□□ 1.26
VEGFA-205ENST00000372067 IL27Q8NEV9 243 aa22.93■■□□□ 1.26
VEGFA-205ENST00000372067 EIF5BO60841 1220 aaKnown RBP22.89■■□□□ 1.25
VEGFA-205ENST00000372067 ARHGEF12Q9NZN5 1544 aa22.89■■□□□ 1.25
VEGFA-205ENST00000372067 PANK3Q9H999 370 aa22.88■■□□□ 1.25
VEGFA-205ENST00000372067 RALGAPBQ86X10 1494 aa22.88■■□□□ 1.25
VEGFA-205ENST00000372067 ARID4BQ4LE39 1312 aaPredicted RBP22.87■■□□□ 1.25
VEGFA-205ENST00000372067 ZBED9Q6R2W3 1325 aa22.86■■□□□ 1.25
VEGFA-205ENST00000372067 RTN4Q9NQC3 1192 aaKnown RBP22.86■■□□□ 1.25
VEGFA-205ENST00000372067 MYO5CQ9NQX4 1742 aa22.86■■□□□ 1.25
VEGFA-205ENST00000372067 KTN1Q86UP2 1357 aaKnown RBP22.85■■□□□ 1.25
VEGFA-205ENST00000372067 ZCCHC11Q5TAX3 1644 aaKnown RBP22.84■■□□□ 1.25
VEGFA-205ENST00000372067 FANCAO15360 1455 aa22.84■■□□□ 1.25
VEGFA-205ENST00000372067 RALBP1Q15311 655 aa22.84■■□□□ 1.25
VEGFA-205ENST00000372067 DUOX2Q9NRD8 1548 aa22.83■■□□□ 1.25
VEGFA-205ENST00000372067 B4GALNT3Q6L9W6 998 aa22.83■■□□□ 1.25
VEGFA-205ENST00000372067 KNSTRNQ9Y448 316 aa22.83■■□□□ 1.25
VEGFA-205ENST00000372067 SHROOM2Q13796 1616 aa22.82■■□□□ 1.24
VEGFA-205ENST00000372067 UHRF1BP1Q6BDS2 1440 aa22.82■■□□□ 1.24
VEGFA-205ENST00000372067 MYBBP1AQ9BQG0 1328 aaKnown RBP22.82■■□□□ 1.24
VEGFA-205ENST00000372067 CYB5RLQ6IPT4 315 aa22.81■■□□□ 1.24
VEGFA-205ENST00000372067 ADGRL1O94910 1474 aa22.81■■□□□ 1.24
VEGFA-205ENST00000372067 WDR7Q9Y4E6 1490 aa22.81■■□□□ 1.24
VEGFA-205ENST00000372067 PRAG1Q86YV5 1406 aa22.8■■□□□ 1.24
VEGFA-205ENST00000372067 NUTM2DQ5VT03 806 aaPredicted RBP22.8■■□□□ 1.24
VEGFA-205ENST00000372067 DHX29Q7Z478 1369 aaKnown RBP22.8■■□□□ 1.24
VEGFA-205ENST00000372067 ASXL2Q76L83 1435 aa22.79■■□□□ 1.24
VEGFA-205ENST00000372067 PLEKHG5O94827 1062 aa22.78■■□□□ 1.24
VEGFA-205ENST00000372067 ERBINQ96RT1 1412 aa22.77■■□□□ 1.24
VEGFA-205ENST00000372067 NLRP13Q86W25 1043 aa22.77■■□□□ 1.24
VEGFA-205ENST00000372067 PNISRQ8TF01 805 aaKnown RBP22.76■■□□□ 1.23
VEGFA-205ENST00000372067 A2MP01023 1474 aa22.76■■□□□ 1.23
VEGFA-205ENST00000372067 PLA2R1Q13018 1463 aa22.76■■□□□ 1.23
VEGFA-205ENST00000372067 KDM5DQ9BY66 1539 aa22.76■■□□□ 1.23
VEGFA-205ENST00000372067 PPP4R2Q9NY27 417 aa22.76■■□□□ 1.23
VEGFA-205ENST00000372067 CFAP70Q5T0N1 1121 aa22.75■■□□□ 1.23
VEGFA-205ENST00000372067 CLASP1Q7Z460 1538 aa22.75■■□□□ 1.23
VEGFA-205ENST00000372067 WASHC2CQ9Y4E1 1318 aa22.75■■□□□ 1.23
VEGFA-205ENST00000372067 RAPGEF3O95398 923 aa22.75■■□□□ 1.23
VEGFA-205ENST00000372067 PKNOX2Q96KN3 472 aa22.75■■□□□ 1.23
VEGFA-205ENST00000372067 UHRF1BP1LA0JNW5 1464 aa22.75■■□□□ 1.23
VEGFA-205ENST00000372067 BCORL1Q5H9F3 1711 aa22.74■■□□□ 1.23
VEGFA-205ENST00000372067 CDCA8Q53HL2 280 aa22.73■■□□□ 1.23
VEGFA-205ENST00000372067 KDM5CP41229 1560 aa22.73■■□□□ 1.23
VEGFA-205ENST00000372067 NUDCQ9Y266 331 aa22.73■■□□□ 1.23
VEGFA-205ENST00000372067 DISP3Q9P2K9 1392 aa22.73■■□□□ 1.23
VEGFA-205ENST00000372067 NBR1Q14596 966 aa22.73■■□□□ 1.23
VEGFA-205ENST00000372067 WDR43Q15061 677 aaKnown RBP eCLIP22.72■■□□□ 1.238e-10■□□□□ 9.1
VEGFA-205ENST00000372067 ABCC1P33527 1531 aa22.7■■□□□ 1.22
VEGFA-205ENST00000372067 TRAK1Q9UPV9 953 aa22.69■■□□□ 1.22
VEGFA-205ENST00000372067 CD109Q6YHK3 1445 aa22.68■■□□□ 1.22
VEGFA-205ENST00000372067 TESK2Q96S53 571 aa22.68■■□□□ 1.22
VEGFA-205ENST00000372067 SAFB2Q14151 953 aaKnown RBP eCLIP22.66■■□□□ 1.22
VEGFA-205ENST00000372067 TNNT2P45379 298 aaPredicted RBP22.66■■□□□ 1.22
VEGFA-205ENST00000372067 STAG3Q9UJ98 1225 aa22.66■■□□□ 1.22
VEGFA-205ENST00000372067 BRD4O60885 1362 aaPredicted RBP22.65■■□□□ 1.22
VEGFA-205ENST00000372067 MAST1Q9Y2H9 1570 aa22.64■■□□□ 1.22
VEGFA-205ENST00000372067 SLC24A1O60721 1099 aa22.64■■□□□ 1.21
VEGFA-205ENST00000372067 ADGRF5Q8IZF2 1346 aa22.63■■□□□ 1.21
VEGFA-205ENST00000372067 RTEL1-TNFRSF6BF6WH68 1400 aa22.62■■□□□ 1.21
VEGFA-205ENST00000372067 TMEM132EQ6IEE7 984 aa22.62■■□□□ 1.21
VEGFA-205ENST00000372067 PLXNC1O60486 1568 aa22.62■■□□□ 1.21
VEGFA-205ENST00000372067 MLECQ14165 292 aa22.61■■□□□ 1.21
VEGFA-205ENST00000372067 ATP7AQ04656 1500 aa22.6■■□□□ 1.21
VEGFA-205ENST00000372067 EIF3AQ14152 1382 aaKnown RBP22.6■■□□□ 1.21
VEGFA-205ENST00000372067 UNC13BO14795 1591 aa22.6■■□□□ 1.21
VEGFA-205ENST00000372067 STK26Q9P289 416 aa22.6■■□□□ 1.21
VEGFA-205ENST00000372067 PAK3O75914 559 aaPredicted RBP22.58■■□□□ 1.21
VEGFA-205ENST00000372067 IQGAP3Q86VI3 1631 aa22.57■■□□□ 1.2
VEGFA-205ENST00000372067 PER1O15534 1290 aaPredicted RBP22.56■■□□□ 1.2
VEGFA-205ENST00000372067 CDCA7LQ96GN5 454 aa22.56■■□□□ 1.2
VEGFA-205ENST00000372067 FAM69CQ0P6D2 419 aa22.54■■□□□ 1.2
VEGFA-205ENST00000372067 RCAN3Q9UKA8 241 aa22.54■■□□□ 1.2
VEGFA-205ENST00000372067 ZFYVE16Q7Z3T8 1539 aa22.54■■□□□ 1.2
VEGFA-205ENST00000372067 ATP10AO60312 1499 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms