RNA–Protein interactions for RNA: ENST00000369510.8

VANGL1-204, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VANGL1, Length 8,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-204ENST00000369510 HSP90AB3PQ58FF7 597 aa10.65□□□□□ -0.7
VANGL1-204ENST00000369510 DIAPH3Q9NSV4 1193 aa10.65□□□□□ -0.71
VANGL1-204ENST00000369510 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.65□□□□□ -0.71
VANGL1-204ENST00000369510 EIF3JO75822 258 aaKnown RBP10.64□□□□□ -0.71
VANGL1-204ENST00000369510 FAM114A1Q8IWE2 563 aa10.64□□□□□ -0.71
VANGL1-204ENST00000369510 KDM2AQ9Y2K7 1162 aa10.64□□□□□ -0.71
VANGL1-204ENST00000369510 PLEKHD1A6NEE1 506 aa10.63□□□□□ -0.71
VANGL1-204ENST00000369510 VSIG10Q8N0Z9 540 aa10.63□□□□□ -0.71
VANGL1-204ENST00000369510 GOLGA6L10A0A0M3HER8 536 aa10.63□□□□□ -0.71
VANGL1-204ENST00000369510 CREBRFQ8IUR6 639 aa10.63□□□□□ -0.71
VANGL1-204ENST00000369510 TMCO5BA8MYB1 307 aa10.63□□□□□ -0.71
VANGL1-204ENST00000369510 CCAR2Q8N163 923 aaKnown RBP10.63□□□□□ -0.71
VANGL1-204ENST00000369510 SEPT6Q14141 434 aa10.62□□□□□ -0.71
VANGL1-204ENST00000369510 ERCC6Q03468 1493 aa10.62□□□□□ -0.71
VANGL1-204ENST00000369510 PDE4CQ08493 712 aa10.62□□□□□ -0.71
VANGL1-204ENST00000369510 CAVIN1Q6NZI2 390 aaKnown RBP10.62□□□□□ -0.71
VANGL1-204ENST00000369510 DEKP35659 375 aaKnown RBP10.61□□□□□ -0.71
VANGL1-204ENST00000369510 SEPT7Q16181 437 aaKnown RBP10.61□□□□□ -0.71
VANGL1-204ENST00000369510 MARCH6O60337 910 aa10.61□□□□□ -0.71
VANGL1-204ENST00000369510 ZCCHC6Q5VYS8 1495 aaKnown RBP10.61□□□□□ -0.71
VANGL1-204ENST00000369510 GRIPAP1Q4V328 841 aa10.61□□□□□ -0.71
VANGL1-204ENST00000369510 DDX23Q9BUQ8 820 aaKnown RBP10.61□□□□□ -0.71
VANGL1-204ENST00000369510 GTPBP4Q9BZE4 634 aaKnown RBP10.61□□□□□ -0.71
VANGL1-204ENST00000369510 ANKRD18BA2A2Z9 1011 aa10.61□□□□□ -0.71
VANGL1-204ENST00000369510 KCNH8Q96L42 1107 aa10.61□□□□□ -0.71
VANGL1-204ENST00000369510 SLC26A8Q96RN1 970 aa10.61□□□□□ -0.71
VANGL1-204ENST00000369510 PLCD4Q9BRC7 762 aa10.61□□□□□ -0.71
VANGL1-204ENST00000369510 LRRFIP1Q32MZ4 808 aaKnown RBP10.6□□□□□ -0.71
VANGL1-204ENST00000369510 FAM107BQ9H098 131 aa10.6□□□□□ -0.71
VANGL1-204ENST00000369510 SIN3AQ96ST3 1273 aa10.6□□□□□ -0.71
VANGL1-204ENST00000369510 SEPT10Q9P0V9 454 aa10.6□□□□□ -0.71
VANGL1-204ENST00000369510 BECN2A8MW95 431 aa10.59□□□□□ -0.71
VANGL1-204ENST00000369510 CCDC91Q7Z6B0 441 aa10.59□□□□□ -0.71
VANGL1-204ENST00000369510 R3HCC1Q9Y3T6 440 aaKnown RBP10.59□□□□□ -0.71
VANGL1-204ENST00000369510 FAM193AP78312 1265 aa10.59□□□□□ -0.71
VANGL1-204ENST00000369510 B4GALNT3Q6L9W6 998 aa10.59□□□□□ -0.71
VANGL1-204ENST00000369510 FBXO3Q9UK99 471 aa10.59□□□□□ -0.71
VANGL1-204ENST00000369510 LUC7LQ9NQ29 371 aaKnown RBP10.59□□□□□ -0.71
VANGL1-204ENST00000369510 FAM114A2Q9NRY5 505 aa10.59□□□□□ -0.71
VANGL1-204ENST00000369510 PKNOX2Q96KN3 472 aa10.58□□□□□ -0.72
VANGL1-204ENST00000369510 ERC1Q8IUD2 1116 aa10.58□□□□□ -0.72
VANGL1-204ENST00000369510 HOMER1Q86YM7 354 aa10.58□□□□□ -0.72
VANGL1-204ENST00000369510 PMFBP1Q8TBY8 1022 aa10.58□□□□□ -0.72
VANGL1-204ENST00000369510 CENPJQ9HC77 1338 aaPredicted RBP10.58□□□□□ -0.72
VANGL1-204ENST00000369510 SSR1P43307 286 aaKnown RBP10.58□□□□□ -0.72
VANGL1-204ENST00000369510 WWC1Q8IX03 1113 aa10.57□□□□□ -0.72
VANGL1-204ENST00000369510 DDX11Q96FC9 970 aa10.57□□□□□ -0.72
VANGL1-204ENST00000369510 CEP63Q96MT8 703 aa10.57□□□□□ -0.72
VANGL1-204ENST00000369510 RBM19Q9Y4C8 960 aaKnown RBP10.57□□□□□ -0.72
VANGL1-204ENST00000369510 DESP17661 470 aa10.57□□□□□ -0.72
VANGL1-204ENST00000369510 HSP90AB2PQ58FF8 381 aa10.57□□□□□ -0.72
VANGL1-204ENST00000369510 IPO8O15397 1037 aaKnown RBP10.57□□□□□ -0.72
VANGL1-204ENST00000369510 IQCEQ6IPM2 695 aa10.57□□□□□ -0.72
VANGL1-204ENST00000369510 CCAR1Q8IX12 1150 aaKnown RBP10.57□□□□□ -0.72
VANGL1-204ENST00000369510 SF3A1Q15459 793 aaKnown RBP10.57□□□□□ -0.72
VANGL1-204ENST00000369510 PODXL2Q9NZ53 605 aa10.57□□□□□ -0.72
VANGL1-204ENST00000369510 SENP3Q9H4L4 574 aaPredicted RBP10.56□□□□□ -0.72
VANGL1-204ENST00000369510 PAIP2Q9BPZ3 127 aaKnown RBP10.56□□□□□ -0.72
VANGL1-204ENST00000369510 TSHZ2Q9NRE2 1034 aa10.56□□□□□ -0.72
VANGL1-204ENST00000369510 RRP7BPQ9NSQ0 103 aa10.56□□□□□ -0.72
VANGL1-204ENST00000369510 RTF1Q92541 710 aaKnown RBP10.56□□□□□ -0.72
VANGL1-204ENST00000369510 ZWINTO95229 277 aa10.56□□□□□ -0.72
VANGL1-204ENST00000369510 PLEKHG5O94827 1062 aa10.56□□□□□ -0.72
VANGL1-204ENST00000369510 ST18O60284 1047 aa10.55□□□□□ -0.72
VANGL1-204ENST00000369510 WWC2Q6AWC2 1192 aa10.55□□□□□ -0.72
VANGL1-204ENST00000369510 MFAP1P55081 439 aaKnown RBP10.54□□□□□ -0.72
VANGL1-204ENST00000369510 RNF20Q5VTR2 975 aa10.54□□□□□ -0.72
VANGL1-204ENST00000369510 NACADO15069 1562 aa10.54□□□□□ -0.72
VANGL1-204ENST00000369510 ARID3AQ99856 593 aa10.54□□□□□ -0.72
VANGL1-204ENST00000369510 SWAP70Q9UH65 585 aa10.54□□□□□ -0.72
VANGL1-204ENST00000369510 BAZ1BQ9UIG0 1483 aaKnown RBP10.54□□□□□ -0.72
VANGL1-204ENST00000369510 WDR66Q8TBY9 1149 aa10.54□□□□□ -0.72
VANGL1-204ENST00000369510 CLIP1P30622 1438 aa10.53□□□□□ -0.72
VANGL1-204ENST00000369510 DNAI2Q9GZS0 605 aa10.53□□□□□ -0.72
VANGL1-204ENST00000369510 KNSTRNQ9Y448 316 aa10.53□□□□□ -0.72
VANGL1-204ENST00000369510 AKAP17AQ02040 695 aaKnown RBP10.53□□□□□ -0.72
VANGL1-204ENST00000369510 CCDC6Q16204 474 aa10.53□□□□□ -0.72
VANGL1-204ENST00000369510 CPLX2Q6PUV4 134 aaKnown RBP10.53□□□□□ -0.72
VANGL1-204ENST00000369510 NAT10Q9H0A0 1025 aaKnown RBP10.53□□□□□ -0.72
VANGL1-204ENST00000369510 IPO9Q96P70 1041 aaKnown RBP10.53□□□□□ -0.72
VANGL1-204ENST00000369510 EEA1Q15075 1411 aa10.53□□□□□ -0.72
VANGL1-204ENST00000369510 CCDC43Q96MW1 224 aaKnown RBP10.53□□□□□ -0.72
VANGL1-204ENST00000369510 CCDC146Q8IYE0 955 aa10.53□□□□□ -0.72
VANGL1-204ENST00000369510 TRIM21P19474 475 aaKnown RBP10.52□□□□□ -0.72
VANGL1-204ENST00000369510 DAAM2Q86T65 1068 aa10.52□□□□□ -0.72
VANGL1-204ENST00000369510 AMOTL1Q8IY63 956 aa10.52□□□□□ -0.72
VANGL1-204ENST00000369510 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.52□□□□□ -0.72
VANGL1-204ENST00000369510 AXDND1Q5T1B0 1012 aaPredicted RBP10.52□□□□□ -0.72
VANGL1-204ENST00000369510 TAOK2Q9UL54 1235 aa10.52□□□□□ -0.72
VANGL1-204ENST00000369510 ERLIN1O75477 346 aa10.52□□□□□ -0.73
VANGL1-204ENST00000369510 SMC1AQ14683 1233 aaKnown RBP10.52□□□□□ -0.73
VANGL1-204ENST00000369510 ENOX2Q16206 610 aaKnown RBP10.52□□□□□ -0.73
VANGL1-204ENST00000369510 VPS53Q5VIR6 699 aa10.52□□□□□ -0.73
VANGL1-204ENST00000369510 CEP162Q5TB80 1403 aa10.52□□□□□ -0.73
VANGL1-204ENST00000369510 NASPP49321 788 aaPredicted RBP10.51□□□□□ -0.73
VANGL1-204ENST00000369510 CHMP5Q9NZZ3 219 aa10.51□□□□□ -0.73
VANGL1-204ENST00000369510 CT47B1P0C2W7 299 aaPredicted RBP10.51□□□□□ -0.73
VANGL1-204ENST00000369510 HDGFP51858 240 aaKnown RBP10.51□□□□□ -0.73
VANGL1-204ENST00000369510 PAF1Q8N7H5 531 aa10.51□□□□□ -0.73
VANGL1-204ENST00000369510 PCMTD1Q96MG8 357 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms