RNA–Protein interactions for RNA: ENST00000367694.2

RC3H1-202, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene RC3H1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-202ENST00000367694 ZKSCAN8Q15776 578 aaPredicted RBP6.36□□□□□ -1.39
RC3H1-202ENST00000367694 PNNQ9H307 717 aaKnown RBP6.36□□□□□ -1.39
RC3H1-202ENST00000367694 TULP2O00295 520 aa6.35□□□□□ -1.39
RC3H1-202ENST00000367694 SMARCA2P51531 1590 aa6.35□□□□□ -1.39
RC3H1-202ENST00000367694 SDR16C5Q8N3Y7 309 aa6.35□□□□□ -1.39
RC3H1-202ENST00000367694 ZBTB7CA1YPR0 619 aa6.34□□□□□ -1.39
RC3H1-202ENST00000367694 SOCS7O14512 581 aa6.34□□□□□ -1.39
RC3H1-202ENST00000367694 MTA1Q13330 715 aa6.34□□□□□ -1.39
RC3H1-202ENST00000367694 SENP3Q9H4L4 574 aaPredicted RBP6.34□□□□□ -1.39
RC3H1-202ENST00000367694 RSF1Q96T23 1441 aaPredicted RBP6.34□□□□□ -1.39
RC3H1-202ENST00000367694 SATB1Q01826 763 aa6.34□□□□□ -1.39
RC3H1-202ENST00000367694 CASC1Q6TDU7 716 aa6.34□□□□□ -1.4
RC3H1-202ENST00000367694 ZHX1Q9UKY1 873 aaPredicted RBP6.34□□□□□ -1.4
RC3H1-202ENST00000367694 PRDM2Q13029 1718 aa6.34□□□□□ -1.4
RC3H1-202ENST00000367694 IRX5P78411 483 aaPredicted RBP6.33□□□□□ -1.4
RC3H1-202ENST00000367694 RINLQ6ZS11 566 aa6.33□□□□□ -1.4
RC3H1-202ENST00000367694 TSPAN18Q96SJ8 248 aa6.33□□□□□ -1.4
RC3H1-202ENST00000367694 ZBTB47Q9UFB7 747 aaPredicted RBP6.33□□□□□ -1.4
RC3H1-202ENST00000367694 RIPK4P57078 832 aa6.33□□□□□ -1.4
RC3H1-202ENST00000367694 CDCA8Q53HL2 280 aa6.33□□□□□ -1.4
RC3H1-202ENST00000367694 APPP05067 770 aa6.33□□□□□ -1.4
RC3H1-202ENST00000367694 MAP2K1Q02750 393 aaPredicted RBP6.33□□□□□ -1.4
RC3H1-202ENST00000367694 NBPF6Q5VWK0 638 aa6.32□□□□□ -1.4
RC3H1-202ENST00000367694 NBPF5PQ86XG9 351 aaPredicted RBP6.32□□□□□ -1.4
RC3H1-202ENST00000367694 NBPF4Q96M43 638 aa6.32□□□□□ -1.4
RC3H1-202ENST00000367694 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.32□□□□□ -1.41e-8■■■■□ 24.7
RC3H1-202ENST00000367694 MYBPC2Q14324 1141 aa6.31□□□□□ -1.4
RC3H1-202ENST00000367694 EFCC1Q9HA90 598 aa6.31□□□□□ -1.4
RC3H1-202ENST00000367694 TERF2IPQ9NYB0 399 aa6.31□□□□□ -1.4
RC3H1-202ENST00000367694 ZNF500O60304 480 aaPredicted RBP6.31□□□□□ -1.4
RC3H1-202ENST00000367694 ARHGEF1Q92888 912 aaKnown RBP6.31□□□□□ -1.4
RC3H1-202ENST00000367694 LOC102724159A0A0B4J2E5 919 aa6.3□□□□□ -1.4
RC3H1-202ENST00000367694 PRR29P0C7W0 189 aa6.3□□□□□ -1.4
RC3H1-202ENST00000367694 PWP2Q15269 919 aaKnown RBP6.3□□□□□ -1.4
RC3H1-202ENST00000367694 DNAJC14Q6Y2X3 702 aaPredicted RBP6.3□□□□□ -1.4
RC3H1-202ENST00000367694 ITGAEP38570 1179 aa6.3□□□□□ -1.4
RC3H1-202ENST00000367694 FBXO41Q8TF61 875 aa6.3□□□□□ -1.4
RC3H1-202ENST00000367694 ZBED9Q6R2W3 1325 aa6.3□□□□□ -1.4
RC3H1-202ENST00000367694 BRPF1P55201 1214 aaPredicted RBP6.3□□□□□ -1.4
RC3H1-202ENST00000367694 THOC2Q8NI27 1593 aaKnown RBP6.29□□□□□ -1.4
RC3H1-202ENST00000367694 UVSSAQ2YD98 709 aa6.29□□□□□ -1.4
RC3H1-202ENST00000367694 NME8Q8N427 588 aa6.29□□□□□ -1.4
RC3H1-202ENST00000367694 PPP4R2Q9NY27 417 aa6.29□□□□□ -1.4
RC3H1-202ENST00000367694 FEZ2Q9UHY8 353 aaPredicted RBP6.29□□□□□ -1.4
RC3H1-202ENST00000367694 ITFG2Q969R8 447 aa6.29□□□□□ -1.4
RC3H1-202ENST00000367694 KIF16BQ96L93 1317 aa6.29□□□□□ -1.4
RC3H1-202ENST00000367694 SIRT1Q96EB6 747 aa6.29□□□□□ -1.4
RC3H1-202ENST00000367694 CCDC94Q9BW85 323 aaPredicted RBP6.29□□□□□ -1.4
RC3H1-202ENST00000367694 ESPNB1AK53 854 aa6.28□□□□□ -1.4
RC3H1-202ENST00000367694 FSD2A1L4K1 749 aa6.28□□□□□ -1.4
RC3H1-202ENST00000367694 RNF217Q8TC41 542 aa6.28□□□□□ -1.4
RC3H1-202ENST00000367694 C11orf91Q3C1V1 193 aa6.28□□□□□ -1.4
RC3H1-202ENST00000367694 SPTY2D1Q68D10 685 aaPredicted RBP6.28□□□□□ -1.4
RC3H1-202ENST00000367694 CCDC125Q86Z20 511 aa6.28□□□□□ -1.4
RC3H1-202ENST00000367694 CEP83Q9Y592 693 aa6.28□□□□□ -1.4
RC3H1-202ENST00000367694 NRDCO43847 1150 aa6.27□□□□□ -1.41
RC3H1-202ENST00000367694 COQ9O75208 318 aa6.27□□□□□ -1.41
RC3H1-202ENST00000367694 RIPOR2Q9Y4F9 1068 aa6.27□□□□□ -1.41
RC3H1-202ENST00000367694 NUB1Q9Y5A7 615 aa6.27□□□□□ -1.41
RC3H1-202ENST00000367694 PHLDB1Q86UU1 1377 aa6.27□□□□□ -1.41
RC3H1-202ENST00000367694 MAPK8IP2Q13387 824 aaPredicted RBP6.27□□□□□ -1.41
RC3H1-202ENST00000367694 DNTTIP2Q5QJE6 756 aaKnown RBP6.27□□□□□ -1.41
RC3H1-202ENST00000367694 TSPYL1Q9H0U9 437 aa6.27□□□□□ -1.41
RC3H1-202ENST00000367694 L1TD1Q5T7N2 865 aaKnown RBP6.26□□□□□ -1.41
RC3H1-202ENST00000367694 WRNQ14191 1432 aaPredicted RBP eCLIP6.26□□□□□ -1.41
RC3H1-202ENST00000367694 NFKBIBQ15653 356 aa6.26□□□□□ -1.41
RC3H1-202ENST00000367694 ZNF526Q8TF50 670 aaPredicted RBP6.26□□□□□ -1.41
RC3H1-202ENST00000367694 VIRMAQ69YN4 1812 aaKnown RBP6.26□□□□□ -1.41
RC3H1-202ENST00000367694 ARID4AP29374 1257 aaPredicted RBP6.26□□□□□ -1.41
RC3H1-202ENST00000367694 ZC3H12AQ5D1E8 599 aaKnown RBP6.26□□□□□ -1.41
RC3H1-202ENST00000367694 CT47A1Q5JQC4 288 aaPredicted RBP6.26□□□□□ -1.41
RC3H1-202ENST00000367694 TNNT2P45379 298 aaPredicted RBP6.25□□□□□ -1.41
RC3H1-202ENST00000367694 FAM210AQ96ND0 272 aa6.25□□□□□ -1.41
RC3H1-202ENST00000367694 RBM28Q9NW13 759 aaKnown RBP6.25□□□□□ -1.41
RC3H1-202ENST00000367694 GOLIM4O00461 696 aa6.24□□□□□ -1.41
RC3H1-202ENST00000367694 KDM4AO75164 1064 aa6.24□□□□□ -1.41
RC3H1-202ENST00000367694 SWT1Q5T5J6 900 aaKnown RBP6.24□□□□□ -1.41
RC3H1-202ENST00000367694 C1orf115Q9H7X2 142 aa6.24□□□□□ -1.41
RC3H1-202ENST00000367694 CCDC189A1A4V9 331 aa6.24□□□□□ -1.41
RC3H1-202ENST00000367694 DDX46Q7L014 1031 aaKnown RBP6.24□□□□□ -1.41
RC3H1-202ENST00000367694 BANK1Q8NDB2 785 aa6.24□□□□□ -1.41
RC3H1-202ENST00000367694 LAMC3Q9Y6N6 1575 aa6.24□□□□□ -1.41
RC3H1-202ENST00000367694 KLHL33A6NCF5 533 aa6.24□□□□□ -1.41
RC3H1-202ENST00000367694 CCDC172P0C7W6 258 aa6.24□□□□□ -1.41
RC3H1-202ENST00000367694 SMARCA4P51532 1647 aa6.24□□□□□ -1.41
RC3H1-202ENST00000367694 CAPN2P17655 700 aa6.23□□□□□ -1.41
RC3H1-202ENST00000367694 C1QTNF12Q5T7M4 302 aa6.23□□□□□ -1.41
RC3H1-202ENST00000367694 MSL3Q8N5Y2 521 aaKnown RBP6.23□□□□□ -1.41
RC3H1-202ENST00000367694 SNRNP27Q8WVK2 155 aaKnown RBP6.23□□□□□ -1.41
RC3H1-202ENST00000367694 ZNF428Q96B54 188 aa6.23□□□□□ -1.41
RC3H1-202ENST00000367694 ANKRD33BA6NCL7 494 aa6.23□□□□□ -1.41
RC3H1-202ENST00000367694 OFD1O75665 1012 aa6.23□□□□□ -1.41
RC3H1-202ENST00000367694 LMOD3Q0VAK6 560 aa6.23□□□□□ -1.41
RC3H1-202ENST00000367694 HDAC1Q13547 482 aaPredicted RBP6.23□□□□□ -1.41
RC3H1-202ENST00000367694 FAM50AQ14320 339 aaKnown RBP6.23□□□□□ -1.41
RC3H1-202ENST00000367694 RPS6KL1Q9Y6S9 549 aa6.23□□□□□ -1.41
RC3H1-202ENST00000367694 KIF1CO43896 1103 aaKnown RBP6.23□□□□□ -1.41
RC3H1-202ENST00000367694 NCAPGQ9BPX3 1015 aa6.23□□□□□ -1.41
RC3H1-202ENST00000367694 CACTIN-AS1Q8N1I8 211 aa6.22□□□□□ -1.41
RC3H1-202ENST00000367694 DONSONQ9NYP3 566 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms