RNA–Protein interactions for RNA: ENST00000361575.3

RPL39-201, Transcript of ribosomal protein L39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL39, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-201ENST00000361575 PCDHGA4Q9Y5G9 962 aa9.68□□□□□ -0.86
RPL39-201ENST00000361575 MAP3K7O43318 606 aa9.67□□□□□ -0.86
RPL39-201ENST00000361575 HOMEZQ8IX15 550 aa9.67□□□□□ -0.86
RPL39-201ENST00000361575 RBM33Q96EV2 1170 aaKnown RBP9.67□□□□□ -0.86
RPL39-201ENST00000361575 SLAIN1Q8ND83 568 aa9.66□□□□□ -0.86
RPL39-201ENST00000361575 GOPCQ9HD26 462 aa9.66□□□□□ -0.86
RPL39-201ENST00000361575 ONECUT3O60422 494 aaPredicted RBP9.65□□□□□ -0.86
RPL39-201ENST00000361575 FAM161AQ3B820 660 aa9.63□□□□□ -0.87
RPL39-201ENST00000361575 TYW1BQ6NUM6 668 aa9.63□□□□□ -0.87
RPL39-201ENST00000361575 JPH4Q96JJ6 628 aa9.63□□□□□ -0.87
RPL39-201ENST00000361575 MDM2Q00987 491 aaPredicted RBP9.62□□□□□ -0.87
RPL39-201ENST00000361575 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.62□□□□□ -0.87
RPL39-201ENST00000361575 FOSBP53539 338 aa9.61□□□□□ -0.87
RPL39-201ENST00000361575 NLRP7Q8WX94 980 aa9.6□□□□□ -0.87
RPL39-201ENST00000361575 RSPH6AQ9H0K4 717 aa9.6□□□□□ -0.87
RPL39-201ENST00000361575 GPCPD1Q9NPB8 672 aa9.6□□□□□ -0.87
RPL39-201ENST00000361575 CLCN1P35523 988 aa9.59□□□□□ -0.87
RPL39-201ENST00000361575 C1orf115Q9H7X2 142 aa9.59□□□□□ -0.87
RPL39-201ENST00000361575 POTEJP0CG39 1038 aa9.58□□□□□ -0.88
RPL39-201ENST00000361575 SH3D19Q5HYK7 790 aa9.58□□□□□ -0.88
RPL39-201ENST00000361575 PADI6Q6TGC4 694 aa9.58□□□□□ -0.88
RPL39-201ENST00000361575 METTL3Q86U44 580 aaKnown RBP9.58□□□□□ -0.88
RPL39-201ENST00000361575 TTC13Q8NBP0 860 aa9.58□□□□□ -0.88
RPL39-201ENST00000361575 FBXW7Q969H0 707 aa9.58□□□□□ -0.88
RPL39-201ENST00000361575 C6orf132Q5T0Z8 1188 aa9.57□□□□□ -0.88
RPL39-201ENST00000361575 POTEHQ6S545 545 aa9.57□□□□□ -0.88
RPL39-201ENST00000361575 KHSRPQ92945 711 aaKnown RBP eCLIP9.57□□□□□ -0.88
RPL39-201ENST00000361575 ADGRG1Q9Y653 693 aa9.57□□□□□ -0.88
RPL39-201ENST00000361575 HOXB3P14651 431 aaPredicted RBP9.56□□□□□ -0.88
RPL39-201ENST00000361575 SSTR3P32745 418 aaPredicted RBP9.56□□□□□ -0.88
RPL39-201ENST00000361575 PXYLP1Q8TE99 480 aa9.56□□□□□ -0.88
RPL39-201ENST00000361575 FAM217BQ9NTX9 383 aaPredicted RBP9.56□□□□□ -0.88
RPL39-201ENST00000361575 ADAM33Q9BZ11 813 aa9.55□□□□□ -0.88
RPL39-201ENST00000361575 FLIIQ13045 1269 aa9.54□□□□□ -0.88
RPL39-201ENST00000361575 PCMTD1Q96MG8 357 aaPredicted RBP9.54□□□□□ -0.88
RPL39-201ENST00000361575 NUDT7P0C024 238 aa9.53□□□□□ -0.88
RPL39-201ENST00000361575 ZNF454Q8N9F8 522 aa9.53□□□□□ -0.88
RPL39-201ENST00000361575 ZDHHC16Q969W1 377 aa9.53□□□□□ -0.88
RPL39-201ENST00000361575 BEGAINQ9BUH8 593 aa9.53□□□□□ -0.88
RPL39-201ENST00000361575 UBTFP17480 764 aaKnown RBP9.52□□□□□ -0.89
RPL39-201ENST00000361575 ARSIQ5FYB1 569 aa9.52□□□□□ -0.89
RPL39-201ENST00000361575 SP7Q8TDD2 431 aaPredicted RBP9.52□□□□□ -0.89
RPL39-201ENST00000361575 OATP04181 439 aa9.51□□□□□ -0.89
RPL39-201ENST00000361575 SKIV2LQ15477 1246 aaKnown RBP9.51□□□□□ -0.89
RPL39-201ENST00000361575 PROCA1Q8NCQ7 364 aaPredicted RBP9.51□□□□□ -0.89
RPL39-201ENST00000361575 CERKQ8TCT0 537 aa9.51□□□□□ -0.89
RPL39-201ENST00000361575 RBM27Q9P2N5 1060 aaKnown RBP9.51□□□□□ -0.89
RPL39-201ENST00000361575 FAM198AQ9UFP1 575 aa9.51□□□□□ -0.89
RPL39-201ENST00000361575 POTEB2H3BUK9 544 aa9.5□□□□□ -0.89
RPL39-201ENST00000361575 MCM6Q14566 821 aa9.5□□□□□ -0.89
RPL39-201ENST00000361575 GPR153Q6NV75 609 aa9.5□□□□□ -0.89
RPL39-201ENST00000361575 CLUAP1Q96AJ1 413 aa9.49□□□□□ -0.89
RPL39-201ENST00000361575 ARID3CA6NKF2 412 aa9.48□□□□□ -0.89
RPL39-201ENST00000361575 PRSS12P56730 875 aa9.48□□□□□ -0.89
RPL39-201ENST00000361575 MYSM1Q5VVJ2 828 aa9.48□□□□□ -0.89
RPL39-201ENST00000361575 COL9A1P20849 921 aa9.47□□□□□ -0.89
RPL39-201ENST00000361575 FBXO31Q5XUX0 539 aaPredicted RBP9.47□□□□□ -0.89
RPL39-201ENST00000361575 CDCA7LQ96GN5 454 aa9.47□□□□□ -0.89
RPL39-201ENST00000361575 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.47□□□□□ -0.89
RPL39-201ENST00000361575 C3orf80F5H4A9 247 aa9.46□□□□□ -0.9
RPL39-201ENST00000361575 DOK7Q18PE1 504 aa9.46□□□□□ -0.9
RPL39-201ENST00000361575 POLR3EQ9NVU0 708 aa9.46□□□□□ -0.9
RPL39-201ENST00000361575 A6NJR5 290 aa9.45□□□□□ -0.9
RPL39-201ENST00000361575 ZSWIM6Q9HCJ5 1215 aa9.44□□□□□ -0.9
RPL39-201ENST00000361575 LHX6Q9UPM6 363 aa9.44□□□□□ -0.9
RPL39-201ENST00000361575 EYA1Q99502 592 aa9.43□□□□□ -0.9
RPL39-201ENST00000361575 TBC1D2Q9BYX2 928 aa9.43□□□□□ -0.9
RPL39-201ENST00000361575 APBB1O00213 710 aa9.42□□□□□ -0.9
RPL39-201ENST00000361575 ARID3AQ99856 593 aa9.42□□□□□ -0.9
RPL39-201ENST00000361575 TSKSQ9UJT2 592 aa9.42□□□□□ -0.9
RPL39-201ENST00000361575 TRAK2O60296 914 aa9.41□□□□□ -0.9
RPL39-201ENST00000361575 RBM46Q8TBY0 533 aaKnown RBP9.41□□□□□ -0.9
RPL39-201ENST00000361575 POM121Q96HA1 1249 aa9.41□□□□□ -0.9
RPL39-201ENST00000361575 BCL2L12Q9HB09 334 aa9.41□□□□□ -0.9
RPL39-201ENST00000361575 LIMD1Q9UGP4 676 aa9.41□□□□□ -0.9
RPL39-201ENST00000361575 RCCD1A6NED2 376 aa9.4□□□□□ -0.9
RPL39-201ENST00000361575 CLK2P49760 499 aaKnown RBP9.4□□□□□ -0.9
RPL39-201ENST00000361575 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.39□□□□□ -0.91
RPL39-201ENST00000361575 CD46P15529 392 aa9.38□□□□□ -0.91
RPL39-201ENST00000361575 FNBP4Q8N3X1 1017 aaPredicted RBP9.38□□□□□ -0.91
RPL39-201ENST00000361575 RIMBP2O15034 1052 aa9.37□□□□□ -0.91
RPL39-201ENST00000361575 PPP4R3BQ5MIZ7 849 aa9.37□□□□□ -0.91
RPL39-201ENST00000361575 SPIRE2Q8WWL2 714 aa9.37□□□□□ -0.91
RPL39-201ENST00000361575 PPP1R3GB7ZBB8 358 aa9.36□□□□□ -0.91
RPL39-201ENST00000361575 RFC5P40937 340 aa9.36□□□□□ -0.91
RPL39-201ENST00000361575 PPP2R2DQ66LE6 453 aa9.35□□□□□ -0.91
RPL39-201ENST00000361575 NUDT18Q6ZVK8 323 aa9.35□□□□□ -0.91
RPL39-201ENST00000361575 SNRKQ9NRH2 765 aa9.35□□□□□ -0.91
RPL39-201ENST00000361575 PROSER2Q86WR7 435 aaPredicted RBP9.34□□□□□ -0.91
RPL39-201ENST00000361575 ZNF710Q8N1W2 664 aa9.34□□□□□ -0.91
RPL39-201ENST00000361575 CCDC82Q8N4S0 544 aa9.34□□□□□ -0.91
RPL39-201ENST00000361575 SPDYE5A6NIY4 337 aa9.33□□□□□ -0.92
RPL39-201ENST00000361575 TRIM6-TRIM34B2RNG4 842 aa9.33□□□□□ -0.92
RPL39-201ENST00000361575 RIC3Q7Z5B4 369 aa9.33□□□□□ -0.92
RPL39-201ENST00000361575 COG6Q9Y2V7 657 aa9.33□□□□□ -0.92
RPL39-201ENST00000361575 SPTLC1O15269 473 aa9.32□□□□□ -0.92
RPL39-201ENST00000361575 PTPREP23469 700 aa9.32□□□□□ -0.92
RPL39-201ENST00000361575 DIXDC1Q155Q3 683 aa9.32□□□□□ -0.92
RPL39-201ENST00000361575 TATDN2Q93075 761 aa9.32□□□□□ -0.92
RPL39-201ENST00000361575 TMEM134Q9H6X4 195 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms