RNA–Protein interactions for RNA: ENST00000360449.3

CPNE8-202, Transcript of copine 8, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CPNE8, Length 1,757 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-202ENST00000360449 FOXD4L4Q8WXT5 416 aaPredicted RBP6.36□□□□□ -1.39
CPNE8-202ENST00000360449 TMEM106CQ9BVX2 250 aa6.36□□□□□ -1.39
CPNE8-202ENST00000360449 AMOTL2Q9Y2J4 779 aa6.36□□□□□ -1.39
CPNE8-202ENST00000360449 BRD1O95696 1058 aa6.35□□□□□ -1.39
CPNE8-202ENST00000360449 DIXDC1Q155Q3 683 aa6.35□□□□□ -1.39
CPNE8-202ENST00000360449 CALR3Q96L12 384 aaKnown RBP6.35□□□□□ -1.39
CPNE8-202ENST00000360449 LOC105371045A0A1W2PR82 267 aa6.34□□□□□ -1.39
CPNE8-202ENST00000360449 PLPP6Q8IY26 295 aa6.34□□□□□ -1.39
CPNE8-202ENST00000360449 TMUB1Q9BVT8 246 aa6.34□□□□□ -1.39
CPNE8-202ENST00000360449 USTQ9Y2C2 406 aa6.34□□□□□ -1.39
CPNE8-202ENST00000360449 SSTR3P32745 418 aaPredicted RBP6.34□□□□□ -1.4
CPNE8-202ENST00000360449 BEGAINQ9BUH8 593 aa6.34□□□□□ -1.4
CPNE8-202ENST00000360449 TBC1D12O60347 775 aa6.33□□□□□ -1.4
CPNE8-202ENST00000360449 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.33□□□□□ -1.4
CPNE8-202ENST00000360449 REPIN1Q9BWE0 567 aaKnown RBP6.33□□□□□ -1.4
CPNE8-202ENST00000360449 SOCS7O14512 581 aa6.32□□□□□ -1.4
CPNE8-202ENST00000360449 IGSF3O75054 1194 aa6.32□□□□□ -1.4
CPNE8-202ENST00000360449 MDM2Q00987 491 aaPredicted RBP6.32□□□□□ -1.4
CPNE8-202ENST00000360449 ILDR1Q86SU0 546 aaPredicted RBP6.32□□□□□ -1.4
CPNE8-202ENST00000360449 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.32□□□□□ -1.4
CPNE8-202ENST00000360449 PRKAR2AP13861 404 aaKnown RBP6.31□□□□□ -1.4
CPNE8-202ENST00000360449 CLK2P49760 499 aaKnown RBP6.31□□□□□ -1.4
CPNE8-202ENST00000360449 POLR3EQ9NVU0 708 aa6.31□□□□□ -1.4
CPNE8-202ENST00000360449 CSB-PGBD3P0DP91 1061 aa6.31□□□□□ -1.4
CPNE8-202ENST00000360449 PROCA1Q8NCQ7 364 aaPredicted RBP6.31□□□□□ -1.4
CPNE8-202ENST00000360449 DDX12PQ92771 950 aa6.31□□□□□ -1.4
CPNE8-202ENST00000360449 PBXIP1Q96AQ6 731 aa6.31□□□□□ -1.4
CPNE8-202ENST00000360449 RFC5P40937 340 aa6.3□□□□□ -1.4
CPNE8-202ENST00000360449 MYT1LQ9UL68 1186 aa6.3□□□□□ -1.4
CPNE8-202ENST00000360449 CCDC27Q2M243 656 aa6.29□□□□□ -1.4
CPNE8-202ENST00000360449 MICALL2Q8IY33 904 aa6.29□□□□□ -1.4
CPNE8-202ENST00000360449 MYT1Q01538 1121 aa6.29□□□□□ -1.4
CPNE8-202ENST00000360449 MYSM1Q5VVJ2 828 aa6.29□□□□□ -1.4
CPNE8-202ENST00000360449 GLMNQ92990 594 aa6.29□□□□□ -1.4
CPNE8-202ENST00000360449 SNRKQ9NRH2 765 aa6.29□□□□□ -1.4
CPNE8-202ENST00000360449 FAM217BQ9NTX9 383 aaPredicted RBP6.28□□□□□ -1.4
CPNE8-202ENST00000360449 OATP04181 439 aa6.27□□□□□ -1.41
CPNE8-202ENST00000360449 HSP90B1P14625 803 aaKnown RBP6.27□□□□□ -1.41
CPNE8-202ENST00000360449 PPP2R2DQ66LE6 453 aa6.27□□□□□ -1.41
CPNE8-202ENST00000360449 ZNF428Q96B54 188 aa6.27□□□□□ -1.41
CPNE8-202ENST00000360449 GDPD2Q9HCC8 539 aa6.27□□□□□ -1.41
CPNE8-202ENST00000360449 G3V3G9 751 aa6.26□□□□□ -1.41
CPNE8-202ENST00000360449 UPF1Q92900 1129 aaKnown RBP eCLIP6.26□□□□□ -1.41
CPNE8-202ENST00000360449 ZRANB1Q9UGI0 708 aa6.26□□□□□ -1.41
CPNE8-202ENST00000360449 C2orf72A6NCS6 295 aa6.25□□□□□ -1.41
CPNE8-202ENST00000360449 SND1Q7KZF4 910 aaKnown RBP eCLIP6.25□□□□□ -1.41
CPNE8-202ENST00000360449 TIE1P35590 1138 aa6.24□□□□□ -1.41
CPNE8-202ENST00000360449 ABL2P42684 1182 aa6.24□□□□□ -1.41
CPNE8-202ENST00000360449 EPAS1Q99814 870 aa6.24□□□□□ -1.41
CPNE8-202ENST00000360449 KIF3CO14782 793 aa6.23□□□□□ -1.41
CPNE8-202ENST00000360449 EVI5O60447 810 aa6.23□□□□□ -1.41
CPNE8-202ENST00000360449 TUSC1Q2TAM9 212 aa6.23□□□□□ -1.41
CPNE8-202ENST00000360449 MTMR14Q8NCE2 650 aa6.23□□□□□ -1.41
CPNE8-202ENST00000360449 TBC1D2Q9BYX2 928 aa6.23□□□□□ -1.41
CPNE8-202ENST00000360449 CDK11BP21127 795 aaKnown RBP6.23□□□□□ -1.41
CPNE8-202ENST00000360449 B4GALNT3Q6L9W6 998 aa6.23□□□□□ -1.41
CPNE8-202ENST00000360449 CDK11AQ9UQ88 783 aaPredicted RBP6.23□□□□□ -1.41
CPNE8-202ENST00000360449 EN1Q05925 392 aaPredicted RBP6.22□□□□□ -1.41
CPNE8-202ENST00000360449 WASHC4Q2M389 1173 aa6.22□□□□□ -1.41
CPNE8-202ENST00000360449 RSPH4AQ5TD94 716 aa6.22□□□□□ -1.41
CPNE8-202ENST00000360449 MAP3K7O43318 606 aa6.21□□□□□ -1.41
CPNE8-202ENST00000360449 METTL3Q86U44 580 aaKnown RBP6.21□□□□□ -1.41
CPNE8-202ENST00000360449 PUS7Q96PZ0 661 aaKnown RBP6.21□□□□□ -1.41
CPNE8-202ENST00000360449 PHOX2BQ99453 314 aa6.21□□□□□ -1.41
CPNE8-202ENST00000360449 PRIM1P49642 420 aaKnown RBP6.21□□□□□ -1.42
CPNE8-202ENST00000360449 FXR2P51116 673 aaKnown RBP eCLIP6.21□□□□□ -1.42
CPNE8-202ENST00000360449 PHF12Q96QT6 1004 aa6.21□□□□□ -1.42
CPNE8-202ENST00000360449 TMEM121BQ9BXQ6 578 aaPredicted RBP6.21□□□□□ -1.42
CPNE8-202ENST00000360449 NPDC1Q9NQX5 325 aaPredicted RBP6.21□□□□□ -1.42
CPNE8-202ENST00000360449 USP35Q9P2H5 1018 aa6.21□□□□□ -1.42
CPNE8-202ENST00000360449 PHF14O94880 888 aa6.2□□□□□ -1.42
CPNE8-202ENST00000360449 RIC3Q7Z5B4 369 aa6.2□□□□□ -1.42
CPNE8-202ENST00000360449 CERKQ8TCT0 537 aa6.2□□□□□ -1.42
CPNE8-202ENST00000360449 BOLA1Q9Y3E2 137 aa6.2□□□□□ -1.42
CPNE8-202ENST00000360449 IVNS1ABPQ9Y6Y0 642 aa6.2□□□□□ -1.42
CPNE8-202ENST00000360449 TTLL13PA6NNM8 815 aa6.19□□□□□ -1.42
CPNE8-202ENST00000360449 POM121CA8CG34 1229 aa6.19□□□□□ -1.42
CPNE8-202ENST00000360449 CD44P16070 742 aaKnown RBP6.19□□□□□ -1.42
CPNE8-202ENST00000360449 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.18□□□□□ -1.42
CPNE8-202ENST00000360449 HDGFL1Q5TGJ6 251 aa6.18□□□□□ -1.42
CPNE8-202ENST00000360449 VRTNQ9H8Y1 702 aa6.18□□□□□ -1.42
CPNE8-202ENST00000360449 TBC1D2BQ9UPU7 963 aa6.18□□□□□ -1.42
CPNE8-202ENST00000360449 NDUFB9Q9Y6M9 179 aa6.18□□□□□ -1.42
CPNE8-202ENST00000360449 ERCC3P19447 782 aa6.18□□□□□ -1.42
CPNE8-202ENST00000360449 GJA5P36382 358 aa6.18□□□□□ -1.42
CPNE8-202ENST00000360449 DPY19L2Q6NUT2 758 aa6.18□□□□□ -1.42
CPNE8-202ENST00000360449 CDHR5Q9HBB8 845 aa6.18□□□□□ -1.42
CPNE8-202ENST00000360449 RFX1P22670 979 aa6.17□□□□□ -1.42
CPNE8-202ENST00000360449 SP7Q8TDD2 431 aaPredicted RBP6.17□□□□□ -1.42
CPNE8-202ENST00000360449 PXYLP1Q8TE99 480 aa6.17□□□□□ -1.42
CPNE8-202ENST00000360449 MS4A3Q96HJ5 214 aa6.17□□□□□ -1.42
CPNE8-202ENST00000360449 ANO8Q9HCE9 1232 aaPredicted RBP6.17□□□□□ -1.42
CPNE8-202ENST00000360449 LIMD1Q9UGP4 676 aa6.17□□□□□ -1.42
CPNE8-202ENST00000360449 SPTLC1O15269 473 aa6.16□□□□□ -1.42
CPNE8-202ENST00000360449 CFAP70Q5T0N1 1121 aa6.16□□□□□ -1.42
CPNE8-202ENST00000360449 PPP1R12CQ9BZL4 782 aa6.16□□□□□ -1.42
CPNE8-202ENST00000360449 AP1G2O75843 785 aa6.16□□□□□ -1.42
CPNE8-202ENST00000360449 SLAIN1Q8ND83 568 aa6.16□□□□□ -1.42
CPNE8-202ENST00000360449 RBM27Q9P2N5 1060 aaKnown RBP6.16□□□□□ -1.42
CPNE8-202ENST00000360449 TRIM35Q9UPQ4 493 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms