RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 CWC15Q9P013 229 aaKnown RBP21.32■■□□□ 1
CACNA1A-201ENST00000360228 KTN1Q86UP2 1357 aaKnown RBP21.32■■□□□ 1
CACNA1A-201ENST00000360228 HOMER1Q86YM7 354 aa21.31■■□□□ 1
CACNA1A-201ENST00000360228 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.31■■□□□ 1
CACNA1A-201ENST00000360228 MCTP1Q6DN14 999 aa21.31■■□□□ 1
CACNA1A-201ENST00000360228 IPO9Q96P70 1041 aaKnown RBP21.3■■□□□ 1
CACNA1A-201ENST00000360228 RAD21O60216 631 aa21.29■■□□□ 1
CACNA1A-201ENST00000360228 CCDC9Q9Y3X0 531 aaKnown RBP21.29■■□□□ 1
CACNA1A-201ENST00000360228 SMC4Q9NTJ3 1288 aa21.29■■□□□ 1
CACNA1A-201ENST00000360228 ODF2Q5BJF6 829 aa21.28■■□□□ 1
CACNA1A-201ENST00000360228 NAP1L1P55209 391 aaKnown RBP21.28■■□□□ 1
CACNA1A-201ENST00000360228 CDR1P51861 262 aa21.28■■□□□ 1
CACNA1A-201ENST00000360228 ANKRD20A12PQ8NF67 263 aa21.27■■□□□ 1
CACNA1A-201ENST00000360228 STK26Q9P289 416 aa21.27■□□□□ 0.99
CACNA1A-201ENST00000360228 U2AF1L5P0DN76 240 aaPredicted RBP21.26■□□□□ 0.99
CACNA1A-201ENST00000360228 U2AF1Q01081 240 aaKnown RBP eCLIP21.26■□□□□ 0.99
CACNA1A-201ENST00000360228 FAM13BQ9NYF5 915 aa21.26■□□□□ 0.99
CACNA1A-201ENST00000360228 HDGFL2Q7Z4V5 671 aaPredicted RBP21.26■□□□□ 0.99
CACNA1A-201ENST00000360228 HDGFP51858 240 aaKnown RBP21.26■□□□□ 0.99
CACNA1A-201ENST00000360228 CT47A1Q5JQC4 288 aaPredicted RBP21.26■□□□□ 0.99
CACNA1A-201ENST00000360228 ATP6V1DQ9Y5K8 247 aa21.25■□□□□ 0.99
CACNA1A-201ENST00000360228 DCTN1Q14203 1278 aa21.25■□□□□ 0.99
CACNA1A-201ENST00000360228 TIMELESSQ9UNS1 1208 aa21.24■□□□□ 0.99
CACNA1A-201ENST00000360228 TRIM34Q9BYJ4 488 aa21.24■□□□□ 0.99
CACNA1A-201ENST00000360228 DDX49Q9Y6V7 483 aaKnown RBP21.24■□□□□ 0.99
CACNA1A-201ENST00000360228 HDAC5Q9UQL6 1122 aa21.23■□□□□ 0.99
CACNA1A-201ENST00000360228 MEX3CQ5U5Q3 659 aaKnown RBP21.23■□□□□ 0.99
CACNA1A-201ENST00000360228 GTF2E1P29083 439 aaPredicted RBP21.23■□□□□ 0.99
CACNA1A-201ENST00000360228 MTERF4Q7Z6M4 381 aaKnown RBP21.22■□□□□ 0.99
CACNA1A-201ENST00000360228 PODXL2Q9NZ53 605 aa21.22■□□□□ 0.99
CACNA1A-201ENST00000360228 CTDP1Q9Y5B0 961 aaPredicted RBP21.22■□□□□ 0.99
CACNA1A-201ENST00000360228 RILPL2Q969X0 211 aa21.22■□□□□ 0.99
CACNA1A-201ENST00000360228 SIN3AQ96ST3 1273 aa21.22■□□□□ 0.99
CACNA1A-201ENST00000360228 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.22■□□□□ 0.99
CACNA1A-201ENST00000360228 PLCD4Q9BRC7 762 aa21.22■□□□□ 0.99
CACNA1A-201ENST00000360228 BCL11BQ9C0K0 894 aaPredicted RBP21.21■□□□□ 0.99
CACNA1A-201ENST00000360228 HOOK1Q9UJC3 728 aaKnown RBP21.21■□□□□ 0.99
CACNA1A-201ENST00000360228 H0YHG0 523 aa21.21■□□□□ 0.99
CACNA1A-201ENST00000360228 CCDC66A2RUB6 948 aa21.21■□□□□ 0.99
CACNA1A-201ENST00000360228 ACBD3Q9H3P7 528 aa21.21■□□□□ 0.99
CACNA1A-201ENST00000360228 CHMP4AQ9BY43 222 aa21.21■□□□□ 0.99
CACNA1A-201ENST00000360228 MLECQ14165 292 aa21.2■□□□□ 0.98
CACNA1A-201ENST00000360228 SYNE3Q6ZMZ3 975 aa21.18■□□□□ 0.98
CACNA1A-201ENST00000360228 TRIM29Q14134 588 aa21.18■□□□□ 0.98
CACNA1A-201ENST00000360228 HSP90AB2PQ58FF8 381 aa21.18■□□□□ 0.98
CACNA1A-201ENST00000360228 CCDC43Q96MW1 224 aaKnown RBP21.18■□□□□ 0.98
CACNA1A-201ENST00000360228 HSP90B2PQ58FF3 399 aa21.18■□□□□ 0.98
CACNA1A-201ENST00000360228 FBXW7Q969H0 707 aa21.18■□□□□ 0.98
CACNA1A-201ENST00000360228 GOLGA3Q08378 1498 aa21.17■□□□□ 0.98
CACNA1A-201ENST00000360228 EPS15P42566 896 aa21.17■□□□□ 0.98
CACNA1A-201ENST00000360228 SKOR2Q2VWA4 1001 aaPredicted RBP21.17■□□□□ 0.98
CACNA1A-201ENST00000360228 NEFHP12036 1026 aa21.16■□□□□ 0.98
CACNA1A-201ENST00000360228 ZFYVE27Q5T4F4 411 aa21.16■□□□□ 0.98
CACNA1A-201ENST00000360228 AMOTL1Q8IY63 956 aa21.16■□□□□ 0.98
CACNA1A-201ENST00000360228 CCDC47Q96A33 483 aaKnown RBP21.16■□□□□ 0.98
CACNA1A-201ENST00000360228 ARGLU1Q9NWB6 273 aaPredicted RBP21.15■□□□□ 0.98
CACNA1A-201ENST00000360228 PKNOX2Q96KN3 472 aa21.14■□□□□ 0.97
CACNA1A-201ENST00000360228 ROCK2O75116 1388 aaKnown RBP21.14■□□□□ 0.97
CACNA1A-201ENST00000360228 CHMP4CQ96CF2 233 aa21.13■□□□□ 0.97
CACNA1A-201ENST00000360228 NEXNQ0ZGT2 675 aa21.13■□□□□ 0.97
CACNA1A-201ENST00000360228 CLUAP1Q96AJ1 413 aa21.13■□□□□ 0.97
CACNA1A-201ENST00000360228 CEP162Q5TB80 1403 aa21.13■□□□□ 0.97
CACNA1A-201ENST00000360228 DYDC1Q8WWB3 177 aa21.12■□□□□ 0.97
CACNA1A-201ENST00000360228 NOL10Q9BSC4 688 aaKnown RBP21.12■□□□□ 0.97
CACNA1A-201ENST00000360228 SKIDA1Q1XH10 827 aa21.12■□□□□ 0.97
CACNA1A-201ENST00000360228 CAGE1Q8TC20 777 aa21.11■□□□□ 0.97
CACNA1A-201ENST00000360228 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.11■□□□□ 0.97
CACNA1A-201ENST00000360228 GSE1Q14687 1217 aa21.11■□□□□ 0.97
CACNA1A-201ENST00000360228 IFT57Q9NWB7 429 aa21.1■□□□□ 0.97
CACNA1A-201ENST00000360228 CCDC173Q0VFZ6 552 aa21.1■□□□□ 0.97
CACNA1A-201ENST00000360228 MNS1Q8NEH6 495 aa21.1■□□□□ 0.97
CACNA1A-201ENST00000360228 DHX16O60231 1041 aaKnown RBP21.09■□□□□ 0.97
CACNA1A-201ENST00000360228 CWC22Q9HCG8 908 aaKnown RBP21.09■□□□□ 0.97
CACNA1A-201ENST00000360228 HSP90AB3PQ58FF7 597 aa21.08■□□□□ 0.97
CACNA1A-201ENST00000360228 MYO6Q9UM54 1294 aa21.08■□□□□ 0.97
CACNA1A-201ENST00000360228 ZRSR2Q15696 482 aaKnown RBP21.07■□□□□ 0.96
CACNA1A-201ENST00000360228 BICD2Q8TD16 824 aa21.07■□□□□ 0.96
CACNA1A-201ENST00000360228 EIF4G1Q04637 1599 aaKnown RBP21.07■□□□□ 0.96
CACNA1A-201ENST00000360228 CCDC146Q8IYE0 955 aa21.07■□□□□ 0.96
CACNA1A-201ENST00000360228 CENPJQ9HC77 1338 aaPredicted RBP21.06■□□□□ 0.96
CACNA1A-201ENST00000360228 CCER2I3L3R5 266 aa21.06■□□□□ 0.96
CACNA1A-201ENST00000360228 LRRFIP1Q32MZ4 808 aaKnown RBP21.06■□□□□ 0.96
CACNA1A-201ENST00000360228 INCENPQ9NQS7 918 aa21.06■□□□□ 0.96
CACNA1A-201ENST00000360228 CPLX2Q6PUV4 134 aaKnown RBP21.05■□□□□ 0.96
CACNA1A-201ENST00000360228 EEA1Q15075 1411 aa21.05■□□□□ 0.96
CACNA1A-201ENST00000360228 SASS6Q6UVJ0 657 aa21.05■□□□□ 0.96
CACNA1A-201ENST00000360228 ANKRD45Q5TZF3 282 aa21.04■□□□□ 0.96
CACNA1A-201ENST00000360228 DIAPH3Q9NSV4 1193 aa21.04■□□□□ 0.96
CACNA1A-201ENST00000360228 TTLL5Q6EMB2 1281 aa21.04■□□□□ 0.96
CACNA1A-201ENST00000360228 TRHP20396 242 aaPredicted RBP21.03■□□□□ 0.96
CACNA1A-201ENST00000360228 EIF3AQ14152 1382 aaKnown RBP21.03■□□□□ 0.96
CACNA1A-201ENST00000360228 CPLX1O14810 134 aa21.03■□□□□ 0.96
CACNA1A-201ENST00000360228 VPS37DQ86XT2 251 aa21.03■□□□□ 0.96
CACNA1A-201ENST00000360228 R3HCC1Q9Y3T6 440 aaKnown RBP21.03■□□□□ 0.96
CACNA1A-201ENST00000360228 PAF1Q8N7H5 531 aa21.03■□□□□ 0.96
CACNA1A-201ENST00000360228 ANO2Q9NQ90 1003 aa21.01■□□□□ 0.95
CACNA1A-201ENST00000360228 CCNB3Q8WWL7 1395 aa21.01■□□□□ 0.95
CACNA1A-201ENST00000360228 FOSBP53539 338 aa21.01■□□□□ 0.95
CACNA1A-201ENST00000360228 NFXL1Q6ZNB6 911 aa21.01■□□□□ 0.95
CACNA1A-201ENST00000360228 RALBP1Q15311 655 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms