RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 RRP7AQ9Y3A4 280 aaKnown RBP18.18■□□□□ 0.5
SREBF1-202ENST00000355815 DAPK1P53355 1430 aa18.17■□□□□ 0.5
SREBF1-202ENST00000355815 AKNAQ7Z591 1439 aa18.17■□□□□ 0.5
SREBF1-202ENST00000355815 DNTTIP2Q5QJE6 756 aaKnown RBP18.17■□□□□ 0.5
SREBF1-202ENST00000355815 IL27Q8NEV9 243 aa18.17■□□□□ 0.5
SREBF1-202ENST00000355815 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.16■□□□□ 0.53e-17■■■■■ 29
SREBF1-202ENST00000355815 MORC1Q86VD1 984 aa18.15■□□□□ 0.5
SREBF1-202ENST00000355815 EHBP1L1Q8N3D4 1523 aa18.15■□□□□ 0.5
SREBF1-202ENST00000355815 ANKRD30BQ9BXX2 1392 aa18.15■□□□□ 0.5
SREBF1-202ENST00000355815 MAP3K1Q13233 1512 aa18.14■□□□□ 0.49
SREBF1-202ENST00000355815 ABCC5O15440 1437 aa18.14■□□□□ 0.49
SREBF1-202ENST00000355815 CLUAP1Q96AJ1 413 aa18.13■□□□□ 0.49
SREBF1-202ENST00000355815 PNNQ9H307 717 aaKnown RBP18.13■□□□□ 0.49
SREBF1-202ENST00000355815 POGKQ9P215 609 aa18.13■□□□□ 0.49
SREBF1-202ENST00000355815 SRPK2P78362 688 aaKnown RBP18.12■□□□□ 0.49
SREBF1-202ENST00000355815 PTMAP06454 111 aaKnown RBP18.11■□□□□ 0.49
SREBF1-202ENST00000355815 RSPH4AQ5TD94 716 aa18.11■□□□□ 0.49
SREBF1-202ENST00000355815 PNISRQ8TF01 805 aaKnown RBP18.11■□□□□ 0.49
SREBF1-202ENST00000355815 BCL2L13Q9BXK5 485 aa18.11■□□□□ 0.49
SREBF1-202ENST00000355815 MIA2Q96PC5 1412 aa18.11■□□□□ 0.49
SREBF1-202ENST00000355815 SOX12O15370 315 aa18.11■□□□□ 0.49
SREBF1-202ENST00000355815 SKAP1Q86WV1 359 aa18.11■□□□□ 0.49
SREBF1-202ENST00000355815 MRC2Q9UBG0 1479 aa18.11■□□□□ 0.49
SREBF1-202ENST00000355815 TROQ12816 1431 aaPredicted RBP18.1■□□□□ 0.49
SREBF1-202ENST00000355815 PTPN23Q9H3S7 1636 aa18.1■□□□□ 0.49
SREBF1-202ENST00000355815 APAF1O14727 1248 aa18.1■□□□□ 0.49
SREBF1-202ENST00000355815 RRP1P56182 461 aaKnown RBP18.1■□□□□ 0.49
SREBF1-202ENST00000355815 CRBNQ96SW2 442 aa18.1■□□□□ 0.49
SREBF1-202ENST00000355815 SUPT6HQ7KZ85 1726 aaKnown RBP18.09■□□□□ 0.49
SREBF1-202ENST00000355815 ADAMTS8Q9UP79 889 aa18.09■□□□□ 0.49
SREBF1-202ENST00000355815 CFAP53Q96M91 514 aa18.08■□□□□ 0.48
SREBF1-202ENST00000355815 FANCIQ9NVI1 1328 aa18.07■□□□□ 0.48
SREBF1-202ENST00000355815 KANK1Q14678 1352 aa18.07■□□□□ 0.48
SREBF1-202ENST00000355815 U2AF1L5P0DN76 240 aaPredicted RBP18.07■□□□□ 0.48
SREBF1-202ENST00000355815 U2AF1Q01081 240 aaKnown RBP eCLIP18.07■□□□□ 0.48
SREBF1-202ENST00000355815 THOC2Q8NI27 1593 aaKnown RBP18.07■□□□□ 0.48
SREBF1-202ENST00000355815 KIAA1107Q9UPP5 1409 aa18.07■□□□□ 0.48
SREBF1-202ENST00000355815 PKNOX2Q96KN3 472 aa18.06■□□□□ 0.48
SREBF1-202ENST00000355815 GOLGA2Q08379 1002 aa18.06■□□□□ 0.48
SREBF1-202ENST00000355815 PLCB2Q00722 1185 aa18.06■□□□□ 0.48
SREBF1-202ENST00000355815 TMEM132EQ6IEE7 984 aa18.06■□□□□ 0.48
SREBF1-202ENST00000355815 CFAP70Q5T0N1 1121 aa18.06■□□□□ 0.48
SREBF1-202ENST00000355815 IQGAP2Q13576 1575 aa18.05■□□□□ 0.48
SREBF1-202ENST00000355815 C9orf84Q5VXU9 1444 aa18.05■□□□□ 0.48
SREBF1-202ENST00000355815 PODXL2Q9NZ53 605 aa18.05■□□□□ 0.48
SREBF1-202ENST00000355815 ARHGEF11O15085 1522 aa18.05■□□□□ 0.48
SREBF1-202ENST00000355815 PAK3O75914 559 aaPredicted RBP18.04■□□□□ 0.48
SREBF1-202ENST00000355815 FTSJ3Q8IY81 847 aaKnown RBP18.04■□□□□ 0.48
SREBF1-202ENST00000355815 KIAA0586Q9BVV6 1533 aa18.04■□□□□ 0.48
SREBF1-202ENST00000355815 GOLGA6L22H0YM25 854 aa18.03■□□□□ 0.48
SREBF1-202ENST00000355815 MSH5O43196 834 aa18.03■□□□□ 0.48
SREBF1-202ENST00000355815 WASHC2CQ9Y4E1 1318 aa18.02■□□□□ 0.48
SREBF1-202ENST00000355815 IFT140Q96RY7 1462 aa18.01■□□□□ 0.47
SREBF1-202ENST00000355815 NCOA1Q15788 1441 aa18.01■□□□□ 0.47
SREBF1-202ENST00000355815 LAMC3Q9Y6N6 1575 aa18.01■□□□□ 0.47
SREBF1-202ENST00000355815 PDE4AP27815 886 aa18.01■□□□□ 0.47
SREBF1-202ENST00000355815 HECW1Q76N89 1606 aa18■□□□□ 0.47
SREBF1-202ENST00000355815 CUL7Q14999 1698 aa17.99■□□□□ 0.47
SREBF1-202ENST00000355815 NUTM2FA1L443 756 aa17.99■□□□□ 0.47
SREBF1-202ENST00000355815 BRPF3Q9ULD4 1205 aa17.99■□□□□ 0.47
SREBF1-202ENST00000355815 MAPK8IP3Q9UPT6 1336 aa17.99■□□□□ 0.47
SREBF1-202ENST00000355815 HSP90AA2PQ14568 343 aaPredicted RBP17.98■□□□□ 0.47
SREBF1-202ENST00000355815 GSE1Q14687 1217 aa17.97■□□□□ 0.47
SREBF1-202ENST00000355815 TCERG1O14776 1098 aaKnown RBP17.97■□□□□ 0.47
SREBF1-202ENST00000355815 L1TD1Q5T7N2 865 aaKnown RBP17.97■□□□□ 0.47
SREBF1-202ENST00000355815 PDE3BQ13370 1112 aa17.96■□□□□ 0.47
SREBF1-202ENST00000355815 COG6Q9Y2V7 657 aa17.95■□□□□ 0.46
SREBF1-202ENST00000355815 C14orf37Q86TY3 774 aa17.95■□□□□ 0.46
SREBF1-202ENST00000355815 CAMSAP2Q08AD1 1489 aa17.95■□□□□ 0.46
SREBF1-202ENST00000355815 ROCK1Q13464 1354 aa17.94■□□□□ 0.46
SREBF1-202ENST00000355815 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.93■□□□□ 0.46
SREBF1-202ENST00000355815 GRIN2AQ12879 1464 aa17.93■□□□□ 0.46
SREBF1-202ENST00000355815 RPRD2Q5VT52 1461 aaKnown RBP17.93■□□□□ 0.46
SREBF1-202ENST00000355815 ARHGAP5Q13017 1502 aa17.93■□□□□ 0.46
SREBF1-202ENST00000355815 HSP90AB1P08238 724 aaKnown RBP17.92■□□□□ 0.46
SREBF1-202ENST00000355815 ELL2O00472 640 aaPredicted RBP17.91■□□□□ 0.46
SREBF1-202ENST00000355815 MSNP26038 577 aaKnown RBP17.91■□□□□ 0.46
SREBF1-202ENST00000355815 A0A0U1RQG5 324 aaPredicted RBP17.91■□□□□ 0.46
SREBF1-202ENST00000355815 UGGT2Q9NYU1 1516 aa17.91■□□□□ 0.46
SREBF1-202ENST00000355815 CYB5RLQ6IPT4 315 aa17.91■□□□□ 0.46
SREBF1-202ENST00000355815 SLC12A5Q9H2X9 1139 aa17.91■□□□□ 0.46
SREBF1-202ENST00000355815 PPP2R1AP30153 589 aa17.9■□□□□ 0.46
SREBF1-202ENST00000355815 SYNJ2O15056 1496 aa17.9■□□□□ 0.46
SREBF1-202ENST00000355815 NUP153P49790 1475 aaKnown RBP17.9■□□□□ 0.46
SREBF1-202ENST00000355815 MINK1Q8N4C8 1332 aaPredicted RBP17.9■□□□□ 0.46
SREBF1-202ENST00000355815 CDK11BP21127 795 aaKnown RBP17.89■□□□□ 0.46
SREBF1-202ENST00000355815 GPATCH8Q9UKJ3 1502 aaKnown RBP17.88■□□□□ 0.45
SREBF1-202ENST00000355815 C20orf194Q5TEA3 1177 aa17.88■□□□□ 0.45
SREBF1-202ENST00000355815 BRD4O60885 1362 aaPredicted RBP17.88■□□□□ 0.45
SREBF1-202ENST00000355815 MAGI3Q5TCQ9 1506 aa17.87■□□□□ 0.45
SREBF1-202ENST00000355815 APBB1O00213 710 aa17.87■□□□□ 0.45
SREBF1-202ENST00000355815 BCAR3O75815 825 aa17.86■□□□□ 0.45
SREBF1-202ENST00000355815 PANK1Q8TE04 598 aa17.86■□□□□ 0.45
SREBF1-202ENST00000355815 MAGI1Q96QZ7 1491 aaPredicted RBP17.86■□□□□ 0.45
SREBF1-202ENST00000355815 RSPH6AQ9H0K4 717 aa17.86■□□□□ 0.45
SREBF1-202ENST00000355815 CENPJQ9HC77 1338 aaPredicted RBP17.86■□□□□ 0.45
SREBF1-202ENST00000355815 GOLGA6L3A6NEY3 463 aa17.86■□□□□ 0.45
SREBF1-202ENST00000355815 CABP2Q9NPB3 220 aa17.86■□□□□ 0.45
SREBF1-202ENST00000355815 SCAPERQ9BY12 1400 aa17.85■□□□□ 0.45
SREBF1-202ENST00000355815 ITPRIPQ8IWB1 547 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms