RNA–Protein interactions for RNA: ENST00000341460.5

SYDE2-202, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYDE2, Length 5,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-202ENST00000341460 KANK4Q5T7N3 995 aaPredicted RBP21.76■■□□□ 1.07
SYDE2-202ENST00000341460 KIF16BQ96L93 1317 aa21.76■■□□□ 1.07
SYDE2-202ENST00000341460 APBB1O00213 710 aa21.76■■□□□ 1.07
SYDE2-202ENST00000341460 FOXD1Q16676 465 aa21.76■■□□□ 1.07
SYDE2-202ENST00000341460 EFCAB2Q5VUJ9 269 aa21.76■■□□□ 1.07
SYDE2-202ENST00000341460 DIAPH3Q9NSV4 1193 aa21.75■■□□□ 1.07
SYDE2-202ENST00000341460 ARGLU1Q9NWB6 273 aaPredicted RBP21.75■■□□□ 1.07
SYDE2-202ENST00000341460 MRE11P49959 708 aa21.75■■□□□ 1.07
SYDE2-202ENST00000341460 CCDC88BA6NC98 1476 aa21.75■■□□□ 1.07
SYDE2-202ENST00000341460 U2AF1L5P0DN76 240 aaPredicted RBP21.75■■□□□ 1.07
SYDE2-202ENST00000341460 U2AF1Q01081 240 aaKnown RBP eCLIP21.75■■□□□ 1.077e-8■■■■■ 29.4
SYDE2-202ENST00000341460 MPHOSPH9Q99550 1183 aa21.75■■□□□ 1.07
SYDE2-202ENST00000341460 NFKBIBQ15653 356 aa21.74■■□□□ 1.07
SYDE2-202ENST00000341460 MROH2BQ7Z745 1585 aa21.74■■□□□ 1.07
SYDE2-202ENST00000341460 NUP155O75694 1391 aa21.74■■□□□ 1.07
SYDE2-202ENST00000341460 CCDC34Q96HJ3 373 aa21.74■■□□□ 1.07
SYDE2-202ENST00000341460 ANKRD30AQ9BXX3 1397 aa21.73■■□□□ 1.07
SYDE2-202ENST00000341460 FMN1Q68DA7 1419 aa21.73■■□□□ 1.07
SYDE2-202ENST00000341460 ST18O60284 1047 aa21.73■■□□□ 1.07
SYDE2-202ENST00000341460 CCDC70Q6NSX1 233 aa21.72■■□□□ 1.07
SYDE2-202ENST00000341460 RDXP35241 583 aaKnown RBP21.72■■□□□ 1.07
SYDE2-202ENST00000341460 PAK3O75914 559 aaPredicted RBP21.71■■□□□ 1.07
SYDE2-202ENST00000341460 GOLGA6L19H0YKK7 550 aa21.71■■□□□ 1.07
SYDE2-202ENST00000341460 EIF3AQ14152 1382 aaKnown RBP21.7■■□□□ 1.06
SYDE2-202ENST00000341460 CHMP4AQ9BY43 222 aa21.7■■□□□ 1.06
SYDE2-202ENST00000341460 PDE4CQ08493 712 aa21.69■■□□□ 1.06
SYDE2-202ENST00000341460 RBM10P98175 930 aaKnown RBP21.68■■□□□ 1.06
SYDE2-202ENST00000341460 CHMP5Q9NZZ3 219 aa21.68■■□□□ 1.06
SYDE2-202ENST00000341460 TAF3Q5VWG9 929 aa21.68■■□□□ 1.06
SYDE2-202ENST00000341460 RRP12Q5JTH9 1297 aaKnown RBP21.67■■□□□ 1.06
SYDE2-202ENST00000341460 CENPQQ7L2Z9 268 aaPredicted RBP21.67■■□□□ 1.06
SYDE2-202ENST00000341460 CSB-PGBD3P0DP91 1061 aa21.67■■□□□ 1.06
SYDE2-202ENST00000341460 RAB3GAP2Q9H2M9 1393 aa21.67■■□□□ 1.06
SYDE2-202ENST00000341460 ITPRIPQ8IWB1 547 aa21.67■■□□□ 1.06
SYDE2-202ENST00000341460 ACBD3Q9H3P7 528 aa21.67■■□□□ 1.06
SYDE2-202ENST00000341460 ISY1Q9ULR0 285 aaKnown RBP21.66■■□□□ 1.06
SYDE2-202ENST00000341460 BECN2A8MW95 431 aa21.66■■□□□ 1.06
SYDE2-202ENST00000341460 HSP90B1P14625 803 aaKnown RBP21.66■■□□□ 1.06
SYDE2-202ENST00000341460 TAF7LQ5H9L4 462 aa21.66■■□□□ 1.06
SYDE2-202ENST00000341460 CCDC39Q9UFE4 941 aa21.65■■□□□ 1.06
SYDE2-202ENST00000341460 H0YHG0 523 aa21.65■■□□□ 1.06
SYDE2-202ENST00000341460 FOXD4L5Q5VV16 416 aaPredicted RBP21.65■■□□□ 1.06
SYDE2-202ENST00000341460 FOXD4L4Q8WXT5 416 aaPredicted RBP21.65■■□□□ 1.06
SYDE2-202ENST00000341460 HSP90B2PQ58FF3 399 aa21.64■■□□□ 1.05
SYDE2-202ENST00000341460 TDRD9Q8NDG6 1382 aaKnown RBP21.64■■□□□ 1.05
SYDE2-202ENST00000341460 PDE3BQ13370 1112 aa21.63■■□□□ 1.05
SYDE2-202ENST00000341460 HMGN5P82970 282 aaKnown RBP21.63■■□□□ 1.05
SYDE2-202ENST00000341460 ATP6V1DQ9Y5K8 247 aa21.62■■□□□ 1.05
SYDE2-202ENST00000341460 SPAG9O60271 1321 aaKnown RBP21.62■■□□□ 1.05
SYDE2-202ENST00000341460 STK31Q9BXU1 1019 aa21.62■■□□□ 1.05
SYDE2-202ENST00000341460 TERF2IPQ9NYB0 399 aa21.62■■□□□ 1.05
SYDE2-202ENST00000341460 HOMER1Q86YM7 354 aa21.61■■□□□ 1.05
SYDE2-202ENST00000341460 KIF3BO15066 747 aa21.61■■□□□ 1.05
SYDE2-202ENST00000341460 CCDC191Q8NCU4 936 aa21.6■■□□□ 1.05
SYDE2-202ENST00000341460 MNS1Q8NEH6 495 aa21.6■■□□□ 1.05
SYDE2-202ENST00000341460 NASPP49321 788 aaPredicted RBP21.6■■□□□ 1.05
SYDE2-202ENST00000341460 NOL8Q76FK4 1167 aaKnown RBP21.59■■□□□ 1.05
SYDE2-202ENST00000341460 ZNF330Q9Y3S2 320 aaPredicted RBP21.59■■□□□ 1.05
SYDE2-202ENST00000341460 RSPH4AQ5TD94 716 aa21.58■■□□□ 1.05
SYDE2-202ENST00000341460 CREBRFQ8IUR6 639 aa21.58■■□□□ 1.05
SYDE2-202ENST00000341460 AK7Q96M32 723 aa21.58■■□□□ 1.05
SYDE2-202ENST00000341460 HDAC5Q9UQL6 1122 aa21.58■■□□□ 1.05
SYDE2-202ENST00000341460 IFT57Q9NWB7 429 aa21.57■■□□□ 1.04
SYDE2-202ENST00000341460 PRM3Q9NNZ6 103 aa21.57■■□□□ 1.04
SYDE2-202ENST00000341460 TSR1Q2NL82 804 aaKnown RBP21.55■■□□□ 1.04
SYDE2-202ENST00000341460 SMC4Q9NTJ3 1288 aa21.55■■□□□ 1.04
SYDE2-202ENST00000341460 KIF3AQ9Y496 699 aa21.55■■□□□ 1.04
SYDE2-202ENST00000341460 TPM1P09493 284 aa21.54■■□□□ 1.04
SYDE2-202ENST00000341460 HSP90AB3PQ58FF7 597 aa21.54■■□□□ 1.04
SYDE2-202ENST00000341460 LEKR1Q6ZMV7 388 aa21.54■■□□□ 1.04
SYDE2-202ENST00000341460 HNRNPMP52272 730 aaKnown RBP eCLIP21.54■■□□□ 1.04
SYDE2-202ENST00000341460 HMMRO75330 724 aa21.54■■□□□ 1.04
SYDE2-202ENST00000341460 EID1Q9Y6B2 187 aa21.54■■□□□ 1.04
SYDE2-202ENST00000341460 CDR1P51861 262 aa21.53■■□□□ 1.04
SYDE2-202ENST00000341460 GPATCH3Q96I76 525 aa21.53■■□□□ 1.04
SYDE2-202ENST00000341460 RUFY1Q96T51 708 aa21.53■■□□□ 1.04
SYDE2-202ENST00000341460 GORABQ5T7V8 394 aa21.52■■□□□ 1.04
SYDE2-202ENST00000341460 L3MBTL2Q969R5 705 aa21.52■■□□□ 1.04
SYDE2-202ENST00000341460 SF3A1Q15459 793 aaKnown RBP21.52■■□□□ 1.04
SYDE2-202ENST00000341460 ZMYND15Q9H091 742 aa21.51■■□□□ 1.03
SYDE2-202ENST00000341460 LMOD3Q0VAK6 560 aa21.51■■□□□ 1.03
SYDE2-202ENST00000341460 NLRP13Q86W25 1043 aa21.51■■□□□ 1.03
SYDE2-202ENST00000341460 CEP89Q96ST8 783 aa21.51■■□□□ 1.03
SYDE2-202ENST00000341460 DEF6Q9H4E7 631 aa21.51■■□□□ 1.03
SYDE2-202ENST00000341460 WASHC2CQ9Y4E1 1318 aa21.5■■□□□ 1.03
SYDE2-202ENST00000341460 CCDC173Q0VFZ6 552 aa21.5■■□□□ 1.03
SYDE2-202ENST00000341460 MAPK8IP2Q13387 824 aaPredicted RBP21.5■■□□□ 1.03
SYDE2-202ENST00000341460 CADPSQ9ULU8 1353 aa21.49■■□□□ 1.03
SYDE2-202ENST00000341460 EXOC6Q8TAG9 804 aa21.49■■□□□ 1.03
SYDE2-202ENST00000341460 TMX4Q9H1E5 349 aaPredicted RBP21.49■■□□□ 1.03
SYDE2-202ENST00000341460 NGDNQ8NEJ9 315 aaKnown RBP21.49■■□□□ 1.03
SYDE2-202ENST00000341460 CCDC18Q5T9S5 1454 aa21.49■■□□□ 1.03
SYDE2-202ENST00000341460 TOP2AP11388 1531 aaKnown RBP21.48■■□□□ 1.03
SYDE2-202ENST00000341460 RASSF8Q8NHQ8 419 aa21.48■■□□□ 1.03
SYDE2-202ENST00000341460 TRIM6-TRIM34B2RNG4 842 aa21.48■■□□□ 1.03
SYDE2-202ENST00000341460 TSPYL1Q9H0U9 437 aa21.48■■□□□ 1.03
SYDE2-202ENST00000341460 CHMP3Q9Y3E7 222 aa21.48■■□□□ 1.03
SYDE2-202ENST00000341460 DCTN1Q14203 1278 aa21.47■■□□□ 1.03
SYDE2-202ENST00000341460 USP8P40818 1118 aa21.47■■□□□ 1.03
SYDE2-202ENST00000341460 RRP1P56182 461 aaKnown RBP21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms