RNA–Protein interactions for RNA: ENST00000341259.6

SH2B3-201, Transcript of SH2B adaptor protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2B3, Length 5,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B3-201ENST00000341259 PTMAP06454 111 aaKnown RBP24.46■■□□□ 1.51
SH2B3-201ENST00000341259 ANKRD50Q9ULJ7 1429 aa24.45■■□□□ 1.51
SH2B3-201ENST00000341259 MRC2Q9UBG0 1479 aa24.45■■□□□ 1.51
SH2B3-201ENST00000341259 MCCP23508 829 aa24.44■■□□□ 1.5
SH2B3-201ENST00000341259 SPRYD3Q8NCJ5 442 aa24.44■■□□□ 1.5
SH2B3-201ENST00000341259 FGD1P98174 961 aa24.44■■□□□ 1.5
SH2B3-201ENST00000341259 ZBED9Q6R2W3 1325 aa24.43■■□□□ 1.5
SH2B3-201ENST00000341259 NGDNQ8NEJ9 315 aaKnown RBP24.43■■□□□ 1.5
SH2B3-201ENST00000341259 EVC2Q86UK5 1308 aa24.43■■□□□ 1.5
SH2B3-201ENST00000341259 POLA1P09884 1462 aaPredicted RBP24.42■■□□□ 1.5
SH2B3-201ENST00000341259 CYB5RLQ6IPT4 315 aa24.42■■□□□ 1.5
SH2B3-201ENST00000341259 RRP7AQ9Y3A4 280 aaKnown RBP24.41■■□□□ 1.5
SH2B3-201ENST00000341259 NPHP1O15259 732 aa24.41■■□□□ 1.5
SH2B3-201ENST00000341259 CLUAP1Q96AJ1 413 aa24.41■■□□□ 1.5
SH2B3-201ENST00000341259 CCDC7Q96M83 1385 aa24.41■■□□□ 1.5
SH2B3-201ENST00000341259 CGNL1Q0VF96 1302 aa24.4■■□□□ 1.5
SH2B3-201ENST00000341259 CSB-PGBD3P0DP91 1061 aa24.4■■□□□ 1.5
SH2B3-201ENST00000341259 IFT140Q96RY7 1462 aa24.39■■□□□ 1.49
SH2B3-201ENST00000341259 NUTM2FA1L443 756 aa24.39■■□□□ 1.49
SH2B3-201ENST00000341259 LMOD3Q0VAK6 560 aa24.39■■□□□ 1.49
SH2B3-201ENST00000341259 STK31Q9BXU1 1019 aa24.38■■□□□ 1.49
SH2B3-201ENST00000341259 KIF7Q2M1P5 1343 aa24.38■■□□□ 1.49
SH2B3-201ENST00000341259 EHBP1L1Q8N3D4 1523 aa24.38■■□□□ 1.49
SH2B3-201ENST00000341259 NAP1L2Q9ULW6 460 aaPredicted RBP24.36■■□□□ 1.49
SH2B3-201ENST00000341259 AMPHP49418 695 aa24.35■■□□□ 1.49
SH2B3-201ENST00000341259 ARHGAP5Q13017 1502 aa24.35■■□□□ 1.49
SH2B3-201ENST00000341259 TAOK2Q9UL54 1235 aa24.35■■□□□ 1.49
SH2B3-201ENST00000341259 SYNJ2O15056 1496 aa24.34■■□□□ 1.49
SH2B3-201ENST00000341259 DNMBPQ6XZF7 1577 aa24.34■■□□□ 1.49
SH2B3-201ENST00000341259 MINK1Q8N4C8 1332 aaPredicted RBP24.33■■□□□ 1.49
SH2B3-201ENST00000341259 PRG4Q92954 1404 aaPredicted RBP24.33■■□□□ 1.49
SH2B3-201ENST00000341259 CNTLNQ9NXG0 1405 aa24.33■■□□□ 1.49
SH2B3-201ENST00000341259 TIAM1Q13009 1591 aa24.33■■□□□ 1.49
SH2B3-201ENST00000341259 RRP1P56182 461 aaKnown RBP24.31■■□□□ 1.48
SH2B3-201ENST00000341259 E9PSI1 815 aa24.31■■□□□ 1.48
SH2B3-201ENST00000341259 CHMP4AQ9BY43 222 aa24.31■■□□□ 1.48
SH2B3-201ENST00000341259 MIA2Q96PC5 1412 aa24.3■■□□□ 1.48
SH2B3-201ENST00000341259 PLIN1O60240 522 aa24.29■■□□□ 1.48
SH2B3-201ENST00000341259 COG3Q96JB2 828 aa24.28■■□□□ 1.48
SH2B3-201ENST00000341259 MFAP1P55081 439 aaKnown RBP24.28■■□□□ 1.48
SH2B3-201ENST00000341259 PLCB2Q00722 1185 aa24.28■■□□□ 1.48
SH2B3-201ENST00000341259 LTV1Q96GA3 475 aaPredicted RBP24.28■■□□□ 1.48
SH2B3-201ENST00000341259 STAC3Q96MF2 364 aa24.28■■□□□ 1.48
SH2B3-201ENST00000341259 HECW1Q76N89 1606 aa24.27■■□□□ 1.48
SH2B3-201ENST00000341259 CDK11BP21127 795 aaKnown RBP24.27■■□□□ 1.48
SH2B3-201ENST00000341259 KIAA1211Q6ZU35 1233 aa24.27■■□□□ 1.48
SH2B3-201ENST00000341259 SNAPC4Q5SXM2 1469 aa24.26■■□□□ 1.47
SH2B3-201ENST00000341259 BICRAQ9NZM4 1560 aa24.26■■□□□ 1.47
SH2B3-201ENST00000341259 SLC4A10Q6U841 1118 aa24.26■■□□□ 1.47
SH2B3-201ENST00000341259 EXOC6Q8TAG9 804 aa24.26■■□□□ 1.47
SH2B3-201ENST00000341259 HMMRO75330 724 aa24.25■■□□□ 1.47
SH2B3-201ENST00000341259 IPO9Q96P70 1041 aaKnown RBP24.25■■□□□ 1.47
SH2B3-201ENST00000341259 WASHC2AQ641Q2 1341 aa24.25■■□□□ 1.47
SH2B3-201ENST00000341259 APAF1O14727 1248 aa24.25■■□□□ 1.47
SH2B3-201ENST00000341259 DNTTIP2Q5QJE6 756 aaKnown RBP24.25■■□□□ 1.47
SH2B3-201ENST00000341259 DEKP35659 375 aaKnown RBP24.24■■□□□ 1.47
SH2B3-201ENST00000341259 SLKQ9H2G2 1235 aaPredicted RBP24.23■■□□□ 1.47
SH2B3-201ENST00000341259 BCL2L13Q9BXK5 485 aa24.23■■□□□ 1.47
SH2B3-201ENST00000341259 GOLGA6L4A6NEF3 574 aa24.23■■□□□ 1.47
SH2B3-201ENST00000341259 CRBNQ96SW2 442 aa24.22■■□□□ 1.47
SH2B3-201ENST00000341259 CENPQQ7L2Z9 268 aaPredicted RBP24.22■■□□□ 1.47
SH2B3-201ENST00000341259 ZNF330Q9Y3S2 320 aaPredicted RBP24.22■■□□□ 1.47
SH2B3-201ENST00000341259 FAM69CQ0P6D2 419 aa24.21■■□□□ 1.47
SH2B3-201ENST00000341259 RTN4Q9NQC3 1192 aaKnown RBP24.21■■□□□ 1.47
SH2B3-201ENST00000341259 AFAP1Q8N556 730 aa24.21■■□□□ 1.47
SH2B3-201ENST00000341259 L1TD1Q5T7N2 865 aaKnown RBP24.21■■□□□ 1.47
SH2B3-201ENST00000341259 HFM1A2PYH4 1435 aa24.2■■□□□ 1.46
SH2B3-201ENST00000341259 TROQ12816 1431 aaPredicted RBP24.2■■□□□ 1.46
SH2B3-201ENST00000341259 C9orf84Q5VXU9 1444 aa24.2■■□□□ 1.46
SH2B3-201ENST00000341259 ZKSCAN2Q63HK3 967 aa24.18■■□□□ 1.46
SH2B3-201ENST00000341259 GBP4Q96PP9 640 aa24.17■■□□□ 1.46
SH2B3-201ENST00000341259 ELL2O00472 640 aaPredicted RBP24.17■■□□□ 1.46
SH2B3-201ENST00000341259 ABCA10Q8WWZ4 1543 aa24.17■■□□□ 1.46
SH2B3-201ENST00000341259 DIAPH1O60610 1272 aaKnown RBP24.16■■□□□ 1.46
SH2B3-201ENST00000341259 SUPT6HQ7KZ85 1726 aaKnown RBP24.16■■□□□ 1.46
SH2B3-201ENST00000341259 HDAC5Q9UQL6 1122 aa24.16■■□□□ 1.46
SH2B3-201ENST00000341259 KIAA1107Q9UPP5 1409 aa24.15■■□□□ 1.46
SH2B3-201ENST00000341259 TRIM6-TRIM34B2RNG4 842 aa24.15■■□□□ 1.46
SH2B3-201ENST00000341259 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.13■■□□□ 1.45
SH2B3-201ENST00000341259 GPATCH3Q96I76 525 aa24.13■■□□□ 1.45
SH2B3-201ENST00000341259 DAPK1P53355 1430 aa24.13■■□□□ 1.45
SH2B3-201ENST00000341259 NGEFQ8N5V2 710 aa24.13■■□□□ 1.45
SH2B3-201ENST00000341259 NAP1L5Q96NT1 182 aaPredicted RBP24.13■■□□□ 1.45
SH2B3-201ENST00000341259 COG6Q9Y2V7 657 aa24.13■■□□□ 1.45
SH2B3-201ENST00000341259 PTMSP20962 102 aa24.12■■□□□ 1.45
SH2B3-201ENST00000341259 GOLGA6L6A8MZA4 724 aa24.11■■□□□ 1.45
SH2B3-201ENST00000341259 PDE4AP27815 886 aa24.1■■□□□ 1.45
SH2B3-201ENST00000341259 RUNDC1Q96C34 613 aa24.1■■□□□ 1.45
SH2B3-201ENST00000341259 CHMP3Q9Y3E7 222 aa24.1■■□□□ 1.45
SH2B3-201ENST00000341259 PLEKHH2Q8IVE3 1493 aa24.1■■□□□ 1.45
SH2B3-201ENST00000341259 BRD4O60885 1362 aaPredicted RBP24.09■■□□□ 1.45
SH2B3-201ENST00000341259 TMEM132EQ6IEE7 984 aa24.09■■□□□ 1.45
SH2B3-201ENST00000341259 FAM161AQ3B820 660 aa24.09■■□□□ 1.45
SH2B3-201ENST00000341259 CDK13Q14004 1512 aaKnown RBP24.09■■□□□ 1.45
SH2B3-201ENST00000341259 PCF11O94913 1555 aaKnown RBP24.08■■□□□ 1.45
SH2B3-201ENST00000341259 RIPK4P57078 832 aa24.08■■□□□ 1.45
SH2B3-201ENST00000341259 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.08■■□□□ 1.44
SH2B3-201ENST00000341259 EPRSP07814 1512 aaKnown RBP24.08■■□□□ 1.44
SH2B3-201ENST00000341259 NBPF8Q3BBV2 869 aa24.07■■□□□ 1.44
SH2B3-201ENST00000341259 KIAA0586Q9BVV6 1533 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms