RNA–Protein interactions for RNA: ENST00000340829.9

CDK13-202, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK13, Length 5,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-202ENST00000340829 EXOC6Q8TAG9 804 aa24.51■■□□□ 1.51
CDK13-202ENST00000340829 ANKRD50Q9ULJ7 1429 aa24.51■■□□□ 1.51
CDK13-202ENST00000340829 IPO9Q96P70 1041 aaKnown RBP24.5■■□□□ 1.51
CDK13-202ENST00000340829 SLKQ9H2G2 1235 aaPredicted RBP24.5■■□□□ 1.51
CDK13-202ENST00000340829 WASHC2AQ641Q2 1341 aa24.5■■□□□ 1.51
CDK13-202ENST00000340829 RRP1P56182 461 aaKnown RBP24.49■■□□□ 1.51
CDK13-202ENST00000340829 NUTM2FA1L443 756 aa24.49■■□□□ 1.51
CDK13-202ENST00000340829 GRIN2BQ13224 1484 aa24.47■■□□□ 1.51
CDK13-202ENST00000340829 TAOK2Q9UL54 1235 aa24.46■■□□□ 1.51
CDK13-202ENST00000340829 FGD1P98174 961 aa24.46■■□□□ 1.51
CDK13-202ENST00000340829 BCL2L13Q9BXK5 485 aa24.45■■□□□ 1.51
CDK13-202ENST00000340829 CNTLNQ9NXG0 1405 aa24.45■■□□□ 1.5
CDK13-202ENST00000340829 ZRSR1Q15695 479 aaKnown RBP24.44■■□□□ 1.5
CDK13-202ENST00000340829 VGFO15240 615 aaPredicted RBP24.44■■□□□ 1.5
CDK13-202ENST00000340829 APAF1O14727 1248 aa24.43■■□□□ 1.5
CDK13-202ENST00000340829 PLCB2Q00722 1185 aa24.43■■□□□ 1.5
CDK13-202ENST00000340829 MFAP1P55081 439 aaKnown RBP24.43■■□□□ 1.5
CDK13-202ENST00000340829 HMGXB3Q12766 1538 aa24.43■■□□□ 1.5
CDK13-202ENST00000340829 CRBNQ96SW2 442 aa24.42■■□□□ 1.5
CDK13-202ENST00000340829 TOPBP1Q92547 1522 aa24.42■■□□□ 1.5
CDK13-202ENST00000340829 POLA1P09884 1462 aaPredicted RBP24.42■■□□□ 1.5
CDK13-202ENST00000340829 MCCP23508 829 aa24.41■■□□□ 1.5
CDK13-202ENST00000340829 CGNL1Q0VF96 1302 aa24.41■■□□□ 1.5
CDK13-202ENST00000340829 EVC2Q86UK5 1308 aa24.4■■□□□ 1.5
CDK13-202ENST00000340829 NAP1L2Q9ULW6 460 aaPredicted RBP24.39■■□□□ 1.5
CDK13-202ENST00000340829 EFCAB5A4FU69 1503 aa24.39■■□□□ 1.5
CDK13-202ENST00000340829 MINK1Q8N4C8 1332 aaPredicted RBP24.39■■□□□ 1.5
CDK13-202ENST00000340829 NGDNQ8NEJ9 315 aaKnown RBP24.39■■□□□ 1.49
CDK13-202ENST00000340829 DNTTIP2Q5QJE6 756 aaKnown RBP24.39■■□□□ 1.49
CDK13-202ENST00000340829 E9PSI1 815 aa24.38■■□□□ 1.49
CDK13-202ENST00000340829 TIAM1Q13009 1591 aa24.38■■□□□ 1.49
CDK13-202ENST00000340829 CFAP44Q96MT7 982 aa24.38■■□□□ 1.49
CDK13-202ENST00000340829 STK31Q9BXU1 1019 aa24.37■■□□□ 1.49
CDK13-202ENST00000340829 EID1Q9Y6B2 187 aa24.37■■□□□ 1.49
CDK13-202ENST00000340829 PDE4AP27815 886 aa24.35■■□□□ 1.49
CDK13-202ENST00000340829 ELL2O00472 640 aaPredicted RBP24.35■■□□□ 1.49
CDK13-202ENST00000340829 CYB5RLQ6IPT4 315 aa24.35■■□□□ 1.49
CDK13-202ENST00000340829 CENPQQ7L2Z9 268 aaPredicted RBP24.35■■□□□ 1.49
CDK13-202ENST00000340829 NAP1L5Q96NT1 182 aaPredicted RBP24.35■■□□□ 1.49
CDK13-202ENST00000340829 SLC4A10Q6U841 1118 aa24.34■■□□□ 1.49
CDK13-202ENST00000340829 CC2D2AQ9P2K1 1620 aa24.34■■□□□ 1.49
CDK13-202ENST00000340829 COG6Q9Y2V7 657 aa24.33■■□□□ 1.49
CDK13-202ENST00000340829 AMPHP49418 695 aa24.32■■□□□ 1.48
CDK13-202ENST00000340829 LMOD3Q0VAK6 560 aa24.32■■□□□ 1.48
CDK13-202ENST00000340829 GZF1Q9H116 711 aaPredicted RBP24.32■■□□□ 1.48
CDK13-202ENST00000340829 LTV1Q96GA3 475 aaPredicted RBP24.32■■□□□ 1.48
CDK13-202ENST00000340829 NBPF8Q3BBV2 869 aa24.31■■□□□ 1.48
CDK13-202ENST00000340829 L1TD1Q5T7N2 865 aaKnown RBP24.31■■□□□ 1.48
CDK13-202ENST00000340829 CSB-PGBD3P0DP91 1061 aa24.31■■□□□ 1.48
CDK13-202ENST00000340829 AFAP1Q8N556 730 aa24.31■■□□□ 1.48
CDK13-202ENST00000340829 EHBP1L1Q8N3D4 1523 aa24.31■■□□□ 1.48
CDK13-202ENST00000340829 HFM1A2PYH4 1435 aa24.31■■□□□ 1.48
CDK13-202ENST00000340829 OSCARQ8IYS5 282 aa24.3■■□□□ 1.48
CDK13-202ENST00000340829 MIA2Q96PC5 1412 aa24.29■■□□□ 1.48
CDK13-202ENST00000340829 PRG4Q92954 1404 aaPredicted RBP24.29■■□□□ 1.48
CDK13-202ENST00000340829 KIAA1211Q6ZU35 1233 aa24.28■■□□□ 1.48
CDK13-202ENST00000340829 GOLGA6L4A6NEF3 574 aa24.27■■□□□ 1.48
CDK13-202ENST00000340829 NPHP1O15259 732 aa24.27■■□□□ 1.48
CDK13-202ENST00000340829 ZKSCAN2Q63HK3 967 aa24.26■■□□□ 1.47
CDK13-202ENST00000340829 ARHGAP5Q13017 1502 aa24.26■■□□□ 1.47
CDK13-202ENST00000340829 GBP4Q96PP9 640 aa24.26■■□□□ 1.47
CDK13-202ENST00000340829 COG3Q96JB2 828 aa24.26■■□□□ 1.47
CDK13-202ENST00000340829 MRC2Q9UBG0 1479 aa24.26■■□□□ 1.47
CDK13-202ENST00000340829 FAM161AQ3B820 660 aa24.25■■□□□ 1.47
CDK13-202ENST00000340829 SLC4A3P48751 1232 aa24.25■■□□□ 1.47
CDK13-202ENST00000340829 HMMRO75330 724 aa24.25■■□□□ 1.47
CDK13-202ENST00000340829 NBPF1Q3BBV0 1214 aa24.24■■□□□ 1.47
CDK13-202ENST00000340829 SYNJ2O15056 1496 aa24.24■■□□□ 1.47
CDK13-202ENST00000340829 ZNF330Q9Y3S2 320 aaPredicted RBP24.23■■□□□ 1.47
CDK13-202ENST00000340829 BICRAQ9NZM4 1560 aa24.23■■□□□ 1.47
CDK13-202ENST00000340829 TRIM6-TRIM34B2RNG4 842 aa24.22■■□□□ 1.47
CDK13-202ENST00000340829 DNMBPQ6XZF7 1577 aa24.21■■□□□ 1.47
CDK13-202ENST00000340829 TMEM132EQ6IEE7 984 aa24.21■■□□□ 1.47
CDK13-202ENST00000340829 FOXD4L1Q9NU39 408 aa24.21■■□□□ 1.47
CDK13-202ENST00000340829 STAC3Q96MF2 364 aa24.2■■□□□ 1.47
CDK13-202ENST00000340829 C9orf84Q5VXU9 1444 aa24.2■■□□□ 1.46
CDK13-202ENST00000340829 IFT140Q96RY7 1462 aa24.2■■□□□ 1.46
CDK13-202ENST00000340829 WDR97A6NE52 1622 aa24.2■■□□□ 1.46
CDK13-202ENST00000340829 KIAA1107Q9UPP5 1409 aa24.2■■□□□ 1.46
CDK13-202ENST00000340829 TROQ12816 1431 aaPredicted RBP24.19■■□□□ 1.46
CDK13-202ENST00000340829 BRD4O60885 1362 aaPredicted RBP24.19■■□□□ 1.46
CDK13-202ENST00000340829 DIAPH1O60610 1272 aaKnown RBP24.19■■□□□ 1.46
CDK13-202ENST00000340829 CFAP70Q5T0N1 1121 aa24.19■■□□□ 1.46
CDK13-202ENST00000340829 ADAMTS8Q9UP79 889 aa24.19■■□□□ 1.46
CDK13-202ENST00000340829 CHMP4AQ9BY43 222 aa24.17■■□□□ 1.46
CDK13-202ENST00000340829 SNAPC4Q5SXM2 1469 aa24.16■■□□□ 1.46
CDK13-202ENST00000340829 ANKRD45Q5TZF3 282 aa24.16■■□□□ 1.46
CDK13-202ENST00000340829 HECW1Q76N89 1606 aa24.16■■□□□ 1.46
CDK13-202ENST00000340829 RIPK4P57078 832 aa24.16■■□□□ 1.46
CDK13-202ENST00000340829 RUNDC1Q96C34 613 aa24.16■■□□□ 1.46
CDK13-202ENST00000340829 CDCA7LQ96GN5 454 aa24.16■■□□□ 1.46
CDK13-202ENST00000340829 DAPK1P53355 1430 aa24.15■■□□□ 1.46
CDK13-202ENST00000340829 FANCIQ9NVI1 1328 aa24.15■■□□□ 1.46
CDK13-202ENST00000340829 CDK13Q14004 1512 aaKnown RBP24.14■■□□□ 1.46
CDK13-202ENST00000340829 NAIPQ13075 1403 aa24.14■■□□□ 1.45
CDK13-202ENST00000340829 CDK11BP21127 795 aaKnown RBP24.14■■□□□ 1.45
CDK13-202ENST00000340829 NGEFQ8N5V2 710 aa24.14■■□□□ 1.45
CDK13-202ENST00000340829 GGNBP2Q9H3C7 697 aa24.14■■□□□ 1.45
CDK13-202ENST00000340829 CABP2Q9NPB3 220 aa24.14■■□□□ 1.45
CDK13-202ENST00000340829 NOL8Q76FK4 1167 aaKnown RBP24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms