RNA–Protein interactions for RNA: ENST00000340001.8

ABCA9-201, Transcript of ATP binding cassette subfamily A member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA9, Length 6,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA9-201ENST00000340001 MPHOSPH9Q99550 1183 aa9.2□□□□□ -0.94
ABCA9-201ENST00000340001 TDRD9Q8NDG6 1382 aaKnown RBP9.2□□□□□ -0.94
ABCA9-201ENST00000340001 DHX16O60231 1041 aaKnown RBP9.19□□□□□ -0.94
ABCA9-201ENST00000340001 GRM1Q13255 1194 aa9.19□□□□□ -0.94
ABCA9-201ENST00000340001 FOXD4L5Q5VV16 416 aaPredicted RBP9.19□□□□□ -0.94
ABCA9-201ENST00000340001 FOXD4L4Q8WXT5 416 aaPredicted RBP9.19□□□□□ -0.94
ABCA9-201ENST00000340001 PATL2C9JE40 543 aaKnown RBP9.19□□□□□ -0.94
ABCA9-201ENST00000340001 FYB1O15117 783 aa9.19□□□□□ -0.94
ABCA9-201ENST00000340001 SF3B2Q13435 895 aaKnown RBP9.19□□□□□ -0.94
ABCA9-201ENST00000340001 HDGFP51858 240 aaKnown RBP9.19□□□□□ -0.94
ABCA9-201ENST00000340001 VPS8Q8N3P4 1428 aa9.19□□□□□ -0.94
ABCA9-201ENST00000340001 CCAR1Q8IX12 1150 aaKnown RBP9.18□□□□□ -0.94
ABCA9-201ENST00000340001 FHOD3Q2V2M9 1422 aa9.18□□□□□ -0.94
ABCA9-201ENST00000340001 PAF1Q8N7H5 531 aa9.18□□□□□ -0.94
ABCA9-201ENST00000340001 CLUAP1Q96AJ1 413 aa9.18□□□□□ -0.94
ABCA9-201ENST00000340001 TCERG1O14776 1098 aaKnown RBP9.18□□□□□ -0.94
ABCA9-201ENST00000340001 ITPRIPQ8IWB1 547 aa9.18□□□□□ -0.94
ABCA9-201ENST00000340001 TSHZ2Q9NRE2 1034 aa9.18□□□□□ -0.94
ABCA9-201ENST00000340001 FHAD1B1AJZ9 1412 aa9.18□□□□□ -0.94
ABCA9-201ENST00000340001 AMPHP49418 695 aa9.17□□□□□ -0.94
ABCA9-201ENST00000340001 RRP7AQ9Y3A4 280 aaKnown RBP9.17□□□□□ -0.94
ABCA9-201ENST00000340001 GOLGA6L6A8MZA4 724 aa9.17□□□□□ -0.94
ABCA9-201ENST00000340001 TRIM6-TRIM34B2RNG4 842 aa9.17□□□□□ -0.94
ABCA9-201ENST00000340001 PLIN1O60240 522 aa9.17□□□□□ -0.94
ABCA9-201ENST00000340001 CHMP4BP1P59074 171 aa9.17□□□□□ -0.94
ABCA9-201ENST00000340001 HSCBQ8IWL3 235 aa9.16□□□□□ -0.94
ABCA9-201ENST00000340001 ECM2O94769 699 aaPredicted RBP9.16□□□□□ -0.94
ABCA9-201ENST00000340001 RCAN3Q9UKA8 241 aa9.16□□□□□ -0.94
ABCA9-201ENST00000340001 U2AF1L5P0DN76 240 aaPredicted RBP9.16□□□□□ -0.94
ABCA9-201ENST00000340001 U2AF1Q01081 240 aaKnown RBP eCLIP9.16□□□□□ -0.94
ABCA9-201ENST00000340001 NUTM2GQ5VZR2 741 aa9.16□□□□□ -0.94
ABCA9-201ENST00000340001 KTN1Q86UP2 1357 aaKnown RBP9.16□□□□□ -0.94
ABCA9-201ENST00000340001 FOXD4L6Q3SYB3 417 aaPredicted RBP9.16□□□□□ -0.94
ABCA9-201ENST00000340001 FOXD4L3Q6VB84 417 aaPredicted RBP9.16□□□□□ -0.94
ABCA9-201ENST00000340001 EID1Q9Y6B2 187 aa9.15□□□□□ -0.94
ABCA9-201ENST00000340001 MFAP1P55081 439 aaKnown RBP9.15□□□□□ -0.94
ABCA9-201ENST00000340001 KIAA1211Q6ZU35 1233 aa9.15□□□□□ -0.94
ABCA9-201ENST00000340001 PLCD3Q8N3E9 789 aa9.15□□□□□ -0.94
ABCA9-201ENST00000340001 CEP89Q96ST8 783 aa9.15□□□□□ -0.94
ABCA9-201ENST00000340001 NUP155O75694 1391 aa9.15□□□□□ -0.94
ABCA9-201ENST00000340001 RAPGEF2Q9Y4G8 1499 aa9.15□□□□□ -0.94
ABCA9-201ENST00000340001 L3MBTL2Q969R5 705 aa9.14□□□□□ -0.95
ABCA9-201ENST00000340001 KANK1Q14678 1352 aa9.14□□□□□ -0.95
ABCA9-201ENST00000340001 CHMP4CQ96CF2 233 aa9.13□□□□□ -0.95
ABCA9-201ENST00000340001 BCL2L13Q9BXK5 485 aa9.13□□□□□ -0.95
ABCA9-201ENST00000340001 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.13□□□□□ -0.95
ABCA9-201ENST00000340001 VPS37DQ86XT2 251 aa9.13□□□□□ -0.95
ABCA9-201ENST00000340001 ELL2O00472 640 aaPredicted RBP9.13□□□□□ -0.95
ABCA9-201ENST00000340001 CHAF1AQ13111 956 aaPredicted RBP9.13□□□□□ -0.95
ABCA9-201ENST00000340001 CCER2I3L3R5 266 aa9.12□□□□□ -0.95
ABCA9-201ENST00000340001 WWC3Q9ULE0 1092 aa9.12□□□□□ -0.95
ABCA9-201ENST00000340001 EIF2S2P20042 333 aaKnown RBP9.12□□□□□ -0.95
ABCA9-201ENST00000340001 HDGFL2Q7Z4V5 671 aaPredicted RBP9.12□□□□□ -0.95
ABCA9-201ENST00000340001 FOSBP53539 338 aa9.11□□□□□ -0.95
ABCA9-201ENST00000340001 TMEM132AQ24JP5 1023 aa9.11□□□□□ -0.95
ABCA9-201ENST00000340001 IKQ13123 557 aaPredicted RBP9.1□□□□□ -0.95
ABCA9-201ENST00000340001 TRAK1Q9UPV9 953 aa9.1□□□□□ -0.95
ABCA9-201ENST00000340001 BCL11BQ9C0K0 894 aaPredicted RBP9.09□□□□□ -0.95
ABCA9-201ENST00000340001 KIF3BO15066 747 aa9.09□□□□□ -0.95
ABCA9-201ENST00000340001 STK11IPQ8N1F8 1099 aa9.09□□□□□ -0.95
ABCA9-201ENST00000340001 STRN4Q9NRL3 753 aa9.09□□□□□ -0.95
ABCA9-201ENST00000340001 APPP05067 770 aa9.09□□□□□ -0.95
ABCA9-201ENST00000340001 SMC4Q9NTJ3 1288 aa9.09□□□□□ -0.95
ABCA9-201ENST00000340001 RBM33Q96EV2 1170 aaKnown RBP9.08□□□□□ -0.96
ABCA9-201ENST00000340001 NRDCO43847 1150 aa9.08□□□□□ -0.96
ABCA9-201ENST00000340001 MCCP23508 829 aa9.08□□□□□ -0.96
ABCA9-201ENST00000340001 NOL10Q9BSC4 688 aaKnown RBP9.08□□□□□ -0.96
ABCA9-201ENST00000340001 CCDC43Q96MW1 224 aaKnown RBP9.07□□□□□ -0.96
ABCA9-201ENST00000340001 MSNP26038 577 aaKnown RBP9.07□□□□□ -0.96
ABCA9-201ENST00000340001 CCDC27Q2M243 656 aa9.06□□□□□ -0.96
ABCA9-201ENST00000340001 STK31Q9BXU1 1019 aa9.06□□□□□ -0.96
ABCA9-201ENST00000340001 ST20-MTHFSA0A0A6YYL1 179 aa9.06□□□□□ -0.96
ABCA9-201ENST00000340001 TOP2AP11388 1531 aaKnown RBP9.05□□□□□ -0.96
ABCA9-201ENST00000340001 PSME1Q06323 249 aa9.05□□□□□ -0.96
ABCA9-201ENST00000340001 EXOC6Q8TAG9 804 aa9.05□□□□□ -0.96
ABCA9-201ENST00000340001 PANK3Q9H999 370 aa9.05□□□□□ -0.96
ABCA9-201ENST00000340001 ZNF219Q9P2Y4 722 aaPredicted RBP9.05□□□□□ -0.96
ABCA9-201ENST00000340001 SPDYE4A6NLX3 237 aa9.05□□□□□ -0.96
ABCA9-201ENST00000340001 ATP2B2Q01814 1243 aa9.05□□□□□ -0.96
ABCA9-201ENST00000340001 PRDM2Q13029 1718 aa9.05□□□□□ -0.96
ABCA9-201ENST00000340001 DHX57Q6P158 1386 aaKnown RBP9.05□□□□□ -0.96
ABCA9-201ENST00000340001 C1orf141Q5JVX7 400 aa9.05□□□□□ -0.96
ABCA9-201ENST00000340001 MS4A1P11836 297 aa9.04□□□□□ -0.96
ABCA9-201ENST00000340001 TPD52L1Q16890 204 aaPredicted RBP9.04□□□□□ -0.96
ABCA9-201ENST00000340001 ZFYVE27Q5T4F4 411 aa9.04□□□□□ -0.96
ABCA9-201ENST00000340001 SPAG9O60271 1321 aaKnown RBP9.04□□□□□ -0.96
ABCA9-201ENST00000340001 AK7Q96M32 723 aa9.04□□□□□ -0.96
ABCA9-201ENST00000340001 CRBNQ96SW2 442 aa9.04□□□□□ -0.96
ABCA9-201ENST00000340001 PCMTD1Q96MG8 357 aaPredicted RBP9.03□□□□□ -0.96
ABCA9-201ENST00000340001 AIMP1Q12904 312 aaKnown RBP9.03□□□□□ -0.96
ABCA9-201ENST00000340001 RILPL2Q969X0 211 aa9.03□□□□□ -0.96
ABCA9-201ENST00000340001 ANKRD30AQ9BXX3 1397 aa9.03□□□□□ -0.96
ABCA9-201ENST00000340001 FMN1Q68DA7 1419 aa9.03□□□□□ -0.96
ABCA9-201ENST00000340001 RALBP1Q15311 655 aa9.03□□□□□ -0.96
ABCA9-201ENST00000340001 RBM5P52756 815 aaKnown RBP eCLIP9.02□□□□□ -0.96
ABCA9-201ENST00000340001 TTC5Q8N0Z6 440 aa9.02□□□□□ -0.96
ABCA9-201ENST00000340001 CCAR2Q8N163 923 aaKnown RBP9.02□□□□□ -0.96
ABCA9-201ENST00000340001 WASHC2CQ9Y4E1 1318 aa9.02□□□□□ -0.96
ABCA9-201ENST00000340001 IPO9Q96P70 1041 aaKnown RBP9.02□□□□□ -0.97
ABCA9-201ENST00000340001 RWDD1Q9H446 243 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms