RNA–Protein interactions for RNA: ENST00000338635.10

XRCC4-202, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS P4 TSL 2 BASIC

Gene XRCC4, Length 1,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-202ENST00000338635 JPH4Q96JJ6 628 aa8.55□□□□□ -1.04
XRCC4-202ENST00000338635 MFSD10Q14728 455 aa8.54□□□□□ -1.04
XRCC4-202ENST00000338635 ZDHHC16Q969W1 377 aa8.54□□□□□ -1.04
XRCC4-202ENST00000338635 NYAP1Q6ZVC0 841 aa8.53□□□□□ -1.04
XRCC4-202ENST00000338635 ADAM33Q9BZ11 813 aa8.53□□□□□ -1.04
XRCC4-202ENST00000338635 BCAMP50895 628 aa8.52□□□□□ -1.05
XRCC4-202ENST00000338635 EMILIN3Q9NT22 766 aa8.52□□□□□ -1.05
XRCC4-202ENST00000338635 CADPS2Q86UW7 1296 aa8.49□□□□□ -1.05
XRCC4-202ENST00000338635 SOWAHBA6NEL2 793 aa8.48□□□□□ -1.05
XRCC4-202ENST00000338635 PCDHGA10Q9Y5H3 936 aa8.48□□□□□ -1.05
XRCC4-202ENST00000338635 PRKD2Q9BZL6 878 aa8.47□□□□□ -1.05
XRCC4-202ENST00000338635 WBP1LQ9NX94 342 aa8.46□□□□□ -1.06
XRCC4-202ENST00000338635 RABGEF1Q9UJ41 708 aa8.46□□□□□ -1.06
XRCC4-202ENST00000338635 PPP1R3GB7ZBB8 358 aa8.44□□□□□ -1.06
XRCC4-202ENST00000338635 PHF14O94880 888 aa8.44□□□□□ -1.06
XRCC4-202ENST00000338635 COL9A1P20849 921 aa8.44□□□□□ -1.06
XRCC4-202ENST00000338635 TYW1BQ6NUM6 668 aa8.44□□□□□ -1.06
XRCC4-202ENST00000338635 PROX2Q3B8N5 592 aa8.43□□□□□ -1.06
XRCC4-202ENST00000338635 LAPTM4BQ86VI4 370 aa8.43□□□□□ -1.06
XRCC4-202ENST00000338635 FBXW7Q969H0 707 aa8.43□□□□□ -1.06
XRCC4-202ENST00000338635 CAMK2BQ13554 666 aa8.4□□□□□ -1.06
XRCC4-202ENST00000338635 ZFRQ96KR1 1074 aaKnown RBP8.4□□□□□ -1.06
XRCC4-202ENST00000338635 V9GY48 417 aaPredicted RBP8.4□□□□□ -1.06
XRCC4-202ENST00000338635 DPYSL4O14531 572 aa8.39□□□□□ -1.07
XRCC4-202ENST00000338635 PDZRN3Q9UPQ7 1066 aa8.39□□□□□ -1.07
XRCC4-202ENST00000338635 C6orf132Q5T0Z8 1188 aa8.38□□□□□ -1.07
XRCC4-202ENST00000338635 EPAS1Q99814 870 aa8.38□□□□□ -1.07
XRCC4-202ENST00000338635 KIAA1468Q9P260 1216 aa8.38□□□□□ -1.07
XRCC4-202ENST00000338635 ONECUT3O60422 494 aaPredicted RBP8.35□□□□□ -1.07
XRCC4-202ENST00000338635 BBXQ8WY36 941 aaPredicted RBP8.35□□□□□ -1.07
XRCC4-202ENST00000338635 RBM33Q96EV2 1170 aaKnown RBP8.35□□□□□ -1.07
XRCC4-202ENST00000338635 TSR3Q9UJK0 312 aaKnown RBP8.35□□□□□ -1.07
XRCC4-202ENST00000338635 DDX12PQ92771 950 aa8.34□□□□□ -1.07
XRCC4-202ENST00000338635 HPS5Q9UPZ3 1129 aa8.33□□□□□ -1.08
XRCC4-202ENST00000338635 PPP1R18Q6NYC8 613 aa8.32□□□□□ -1.08
XRCC4-202ENST00000338635 TRIM6-TRIM34B2RNG4 842 aa8.31□□□□□ -1.08
XRCC4-202ENST00000338635 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.31□□□□□ -1.08
XRCC4-202ENST00000338635 SEPT9Q9UHD8 586 aaPredicted RBP8.31□□□□□ -1.08
XRCC4-202ENST00000338635 TREML4Q6UXN2 200 aa8.31□□□□□ -1.08
XRCC4-202ENST00000338635 TJAP1Q5JTD0 557 aa8.29□□□□□ -1.08
XRCC4-202ENST00000338635 LRCH3Q96II8 777 aa8.29□□□□□ -1.08
XRCC4-202ENST00000338635 FAM98CQ17RN3 349 aaKnown RBP8.28□□□□□ -1.08
XRCC4-202ENST00000338635 SPRYD3Q8NCJ5 442 aa8.28□□□□□ -1.08
XRCC4-202ENST00000338635 POTECB2RU33 542 aa8.27□□□□□ -1.09
XRCC4-202ENST00000338635 NBR1Q14596 966 aa8.27□□□□□ -1.09
XRCC4-202ENST00000338635 LCE2AQ5TA79 106 aaPredicted RBP8.27□□□□□ -1.09
XRCC4-202ENST00000338635 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.27□□□□□ -1.09
XRCC4-202ENST00000338635 LOC100996750A0A140TA64 210 aa8.27□□□□□ -1.09
XRCC4-202ENST00000338635 MAP3K7O43318 606 aa8.27□□□□□ -1.09
XRCC4-202ENST00000338635 EN1Q05925 392 aaPredicted RBP8.27□□□□□ -1.09
XRCC4-202ENST00000338635 TSR1Q2NL82 804 aaKnown RBP8.27□□□□□ -1.09
XRCC4-202ENST00000338635 KRTAP4-6Q9BYQ5 205 aa8.27□□□□□ -1.09
XRCC4-202ENST00000338635 SPDYE16A6NNV3 312 aaPredicted RBP8.26□□□□□ -1.09
XRCC4-202ENST00000338635 PDIA6Q15084 440 aa8.26□□□□□ -1.09
XRCC4-202ENST00000338635 PACS2Q86VP3 889 aa8.26□□□□□ -1.09
XRCC4-202ENST00000338635 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.25□□□□□ -1.09
XRCC4-202ENST00000338635 TSKSQ9UJT2 592 aa8.25□□□□□ -1.09
XRCC4-202ENST00000338635 MYT1Q01538 1121 aa8.24□□□□□ -1.09
XRCC4-202ENST00000338635 PPP4CP60510 307 aa8.23□□□□□ -1.09
XRCC4-202ENST00000338635 E2F4Q16254 413 aa8.23□□□□□ -1.09
XRCC4-202ENST00000338635 IL21Q9HBE4 155 aa8.23□□□□□ -1.09
XRCC4-202ENST00000338635 STK17AQ9UEE5 414 aa8.23□□□□□ -1.09
XRCC4-202ENST00000338635 PKDCCQ504Y2 493 aa8.22□□□□□ -1.09
XRCC4-202ENST00000338635 MTRQ99707 1265 aa8.22□□□□□ -1.09
XRCC4-202ENST00000338635 CDCA7LQ96GN5 454 aa8.21□□□□□ -1.1
XRCC4-202ENST00000338635 WDR70Q9NW82 654 aa8.21□□□□□ -1.1
XRCC4-202ENST00000338635 GRXCR2A6NFK2 248 aa8.2□□□□□ -1.1
XRCC4-202ENST00000338635 DGAT1O75907 488 aa8.2□□□□□ -1.1
XRCC4-202ENST00000338635 PRSS12P56730 875 aa8.2□□□□□ -1.1
XRCC4-202ENST00000338635 SMAPO00193 183 aa8.19□□□□□ -1.1
XRCC4-202ENST00000338635 PRIM1P49642 420 aaKnown RBP8.19□□□□□ -1.1
XRCC4-202ENST00000338635 PAXIP1Q6ZW49 1069 aaPredicted RBP8.19□□□□□ -1.1
XRCC4-202ENST00000338635 CFAP44Q96MT7 982 aa8.19□□□□□ -1.1
XRCC4-202ENST00000338635 FAM198AQ9UFP1 575 aa8.18□□□□□ -1.1
XRCC4-202ENST00000338635 ARIH1Q9Y4X5 557 aaPredicted RBP8.18□□□□□ -1.1
XRCC4-202ENST00000338635 TRIM67Q6ZTA4 783 aa8.18□□□□□ -1.1
XRCC4-202ENST00000338635 SAMD7Q7Z3H4 446 aa8.18□□□□□ -1.1
XRCC4-202ENST00000338635 CERKQ8TCT0 537 aa8.18□□□□□ -1.1
XRCC4-202ENST00000338635 ZNF516Q92618 1163 aa8.17□□□□□ -1.1
XRCC4-202ENST00000338635 TATDN2Q93075 761 aa8.17□□□□□ -1.1
XRCC4-202ENST00000338635 C3orf80F5H4A9 247 aa8.15□□□□□ -1.1
XRCC4-202ENST00000338635 OSBPP22059 807 aa8.15□□□□□ -1.1
XRCC4-202ENST00000338635 GGCXP38435 758 aa8.15□□□□□ -1.1
XRCC4-202ENST00000338635 PNMA3Q9UL41 463 aa8.15□□□□□ -1.1
XRCC4-202ENST00000338635 AMER1Q5JTC6 1135 aaPredicted RBP8.14□□□□□ -1.11
XRCC4-202ENST00000338635 NBPF26B4DH59 902 aa8.14□□□□□ -1.11
XRCC4-202ENST00000338635 WFS1O76024 890 aa8.13□□□□□ -1.11
XRCC4-202ENST00000338635 NKX2-3Q8TAU0 364 aa8.13□□□□□ -1.11
XRCC4-202ENST00000338635 CDHR5Q9HBB8 845 aa8.13□□□□□ -1.11
XRCC4-202ENST00000338635 HDGFP51858 240 aaKnown RBP8.12□□□□□ -1.11
XRCC4-202ENST00000338635 NUDT18Q6ZVK8 323 aa8.12□□□□□ -1.11
XRCC4-202ENST00000338635 INSM1Q01101 510 aaPredicted RBP8.11□□□□□ -1.11
XRCC4-202ENST00000338635 TMUB1Q9BVT8 246 aa8.1□□□□□ -1.11
XRCC4-202ENST00000338635 RTN4Q9NQC3 1192 aaKnown RBP8.1□□□□□ -1.11
XRCC4-202ENST00000338635 WIPF1O43516 503 aa8.08□□□□□ -1.12
XRCC4-202ENST00000338635 RNF40O75150 1001 aa8.08□□□□□ -1.12
XRCC4-202ENST00000338635 SLC19A1P41440 591 aa8.08□□□□□ -1.12
XRCC4-202ENST00000338635 PRR20EP86478 221 aa8.08□□□□□ -1.12
XRCC4-202ENST00000338635 PRR20CP86479 221 aa8.08□□□□□ -1.12
XRCC4-202ENST00000338635 PRR20DP86480 221 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms