RNA–Protein interactions for RNA: ENST00000329516.7

RGPD6-201, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD6, Length 7,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-201ENST00000329516 KALRNO60229 2985 aa4.47□□□□□ -1.69
RGPD6-201ENST00000329516 RIMBP3CA6NJZ7 1639 aa4.46□□□□□ -1.69
RGPD6-201ENST00000329516 RIMBP3BA6NNM3 1639 aa4.46□□□□□ -1.69
RGPD6-201ENST00000329516 RIMBP3Q9UFD9 1639 aa4.46□□□□□ -1.69
RGPD6-201ENST00000329516 CD163L1Q9NR16 1453 aa4.46□□□□□ -1.69
RGPD6-201ENST00000329516 ALS2Q96Q42 1657 aa4.45□□□□□ -1.7
RGPD6-201ENST00000329516 RICTORQ6R327 1708 aa4.45□□□□□ -1.7
RGPD6-201ENST00000329516 NBEAQ8NFP9 2946 aa4.45□□□□□ -1.7
RGPD6-201ENST00000329516 NRKQ7Z2Y5 1582 aa4.45□□□□□ -1.7
RGPD6-201ENST00000329516 NHSL1Q5SYE7 1610 aa4.45□□□□□ -1.7
RGPD6-201ENST00000329516 FAM135AQ9P2D6 1515 aa4.45□□□□□ -1.7
RGPD6-201ENST00000329516 WDR7Q9Y4E6 1490 aa4.45□□□□□ -1.7
RGPD6-201ENST00000329516 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.45□□□□□ -1.7
RGPD6-201ENST00000329516 EEA1Q15075 1411 aa4.44□□□□□ -1.7
RGPD6-201ENST00000329516 FANCD2Q9BXW9 1451 aa4.44□□□□□ -1.7
RGPD6-201ENST00000329516 CASKIN1Q8WXD9 1431 aa4.44□□□□□ -1.7
RGPD6-201ENST00000329516 USP54Q70EL1 1684 aa4.44□□□□□ -1.7
RGPD6-201ENST00000329516 IQGAP3Q86VI3 1631 aa4.44□□□□□ -1.7
RGPD6-201ENST00000329516 ALKQ9UM73 1620 aa4.44□□□□□ -1.7
RGPD6-201ENST00000329516 KIF13AQ9H1H9 1805 aa4.43□□□□□ -1.7
RGPD6-201ENST00000329516 N4BP2Q86UW6 1770 aaPredicted RBP4.43□□□□□ -1.7
RGPD6-201ENST00000329516 FYCO1Q9BQS8 1478 aa4.43□□□□□ -1.7
RGPD6-201ENST00000329516 PEAK1Q9H792 1746 aa4.43□□□□□ -1.7
RGPD6-201ENST00000329516 SYNMO15061 1565 aa4.43□□□□□ -1.7
RGPD6-201ENST00000329516 EHBP1L1Q8N3D4 1523 aa4.43□□□□□ -1.7
RGPD6-201ENST00000329516 PCGF6Q9BYE7 350 aa4.42□□□□□ -1.7
RGPD6-201ENST00000329516 EPRSP07814 1512 aaKnown RBP4.42□□□□□ -1.7
RGPD6-201ENST00000329516 GPATCH8Q9UKJ3 1502 aaKnown RBP4.42□□□□□ -1.7
RGPD6-201ENST00000329516 ASH1LQ9NR48 2969 aaKnown RBP4.42□□□□□ -1.7
RGPD6-201ENST00000329516 PRDM15P57071 1507 aaPredicted RBP4.42□□□□□ -1.7
RGPD6-201ENST00000329516 ADAMTS7Q9UKP4 1686 aa4.42□□□□□ -1.7
RGPD6-201ENST00000329516 DMXL2Q8TDJ6 3036 aa4.42□□□□□ -1.7
RGPD6-201ENST00000329516 ABCC5O15440 1437 aa4.42□□□□□ -1.7
RGPD6-201ENST00000329516 UHRF1BP1Q6BDS2 1440 aa4.41□□□□□ -1.7
RGPD6-201ENST00000329516 PPLO60437 1756 aa4.41□□□□□ -1.7
RGPD6-201ENST00000329516 ANKRD30BQ9BXX2 1392 aa4.41□□□□□ -1.7
RGPD6-201ENST00000329516 RPRD2Q5VT52 1461 aaKnown RBP4.4□□□□□ -1.7
RGPD6-201ENST00000329516 NBPF19A0A087WUL8 3843 aa4.4□□□□□ -1.7
RGPD6-201ENST00000329516 NCOA1Q15788 1441 aa4.4□□□□□ -1.7
RGPD6-201ENST00000329516 TDRD9Q8NDG6 1382 aaKnown RBP4.4□□□□□ -1.71
RGPD6-201ENST00000329516 PLB1Q6P1J6 1458 aa4.4□□□□□ -1.71
RGPD6-201ENST00000329516 CLTCL1P53675 1640 aa4.39□□□□□ -1.71
RGPD6-201ENST00000329516 NALCNQ8IZF0 1738 aa4.39□□□□□ -1.71
RGPD6-201ENST00000329516 PER1O15534 1290 aaPredicted RBP4.39□□□□□ -1.71
RGPD6-201ENST00000329516 UHRF1BP1LA0JNW5 1464 aa4.39□□□□□ -1.71
RGPD6-201ENST00000329516 NBPF8Q3BBV2 869 aa4.39□□□□□ -1.71
RGPD6-201ENST00000329516 LRPPRCP42704 1394 aaKnown RBP4.39□□□□□ -1.71
RGPD6-201ENST00000329516 ARHGEF28Q8N1W1 1705 aaKnown RBP4.38□□□□□ -1.71
RGPD6-201ENST00000329516 XIRP1Q702N8 1843 aaKnown RBP4.38□□□□□ -1.71
RGPD6-201ENST00000329516 SLIT1O75093 1534 aa4.38□□□□□ -1.71
RGPD6-201ENST00000329516 ATP10BO94823 1461 aa4.38□□□□□ -1.71
RGPD6-201ENST00000329516 REREQ9P2R6 1566 aa4.38□□□□□ -1.71
RGPD6-201ENST00000329516 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.38□□□□□ -1.71
RGPD6-201ENST00000329516 COL3A1P02461 1466 aaPredicted RBP4.38□□□□□ -1.71
RGPD6-201ENST00000329516 CDC42BPGQ6DT37 1551 aa4.38□□□□□ -1.71
RGPD6-201ENST00000329516 FHOD3Q2V2M9 1422 aa4.38□□□□□ -1.71
RGPD6-201ENST00000329516 CLTCQ00610 1675 aaKnown RBP4.38□□□□□ -1.71
RGPD6-201ENST00000329516 NWD1Q149M9 1564 aa4.38□□□□□ -1.71
RGPD6-201ENST00000329516 ZNF646O15015 1829 aaPredicted RBP4.38□□□□□ -1.71
RGPD6-201ENST00000329516 SYCP2Q9BX26 1530 aa4.38□□□□□ -1.71
RGPD6-201ENST00000329516 ZZEF1O43149 2961 aa4.38□□□□□ -1.71
RGPD6-201ENST00000329516 UGGT1Q9NYU2 1555 aa4.38□□□□□ -1.71
RGPD6-201ENST00000329516 ABCC3O15438 1527 aa4.37□□□□□ -1.71
RGPD6-201ENST00000329516 ARHGEF5Q12774 1597 aa4.37□□□□□ -1.71
RGPD6-201ENST00000329516 ITSN2Q9NZM3 1697 aa4.37□□□□□ -1.71
RGPD6-201ENST00000329516 FGD6Q6ZV73 1430 aa4.37□□□□□ -1.71
RGPD6-201ENST00000329516 DLG5Q8TDM6 1919 aa4.37□□□□□ -1.71
RGPD6-201ENST00000329516 DCHS2Q6V1P9 2916 aa4.36□□□□□ -1.71
RGPD6-201ENST00000329516 PTPRMP28827 1452 aa4.36□□□□□ -1.71
RGPD6-201ENST00000329516 ZNF521Q96K83 1311 aa4.36□□□□□ -1.71
RGPD6-201ENST00000329516 MRC2Q9UBG0 1479 aa4.36□□□□□ -1.71
RGPD6-201ENST00000329516 ZFYVE16Q7Z3T8 1539 aa4.36□□□□□ -1.71
RGPD6-201ENST00000329516 PABPN1Q86U42 306 aaKnown RBP eCLIP4.36□□□□□ -1.71
RGPD6-201ENST00000329516 RIMS1Q86UR5 1692 aaKnown RBP4.36□□□□□ -1.71
RGPD6-201ENST00000329516 TOPAZ1Q8N9V7 1692 aa4.36□□□□□ -1.71
RGPD6-201ENST00000329516 STRCP1A6NGW2 1772 aa4.36□□□□□ -1.71
RGPD6-201ENST00000329516 RAB3GAP2Q9H2M9 1393 aa4.36□□□□□ -1.71
RGPD6-201ENST00000329516 AKAP9Q99996 3911 aa4.35□□□□□ -1.71
RGPD6-201ENST00000329516 KIAA1210Q9ULL0 1709 aa4.35□□□□□ -1.71
RGPD6-201ENST00000329516 SIPA1L3O60292 1781 aaPredicted RBP4.35□□□□□ -1.71
RGPD6-201ENST00000329516 SHANK3Q9BYB0 1731 aa4.35□□□□□ -1.71
RGPD6-201ENST00000329516 EFCAB6Q5THR3 1501 aa4.35□□□□□ -1.71
RGPD6-201ENST00000329516 GPRASP1Q5JY77 1395 aa4.35□□□□□ -1.71
RGPD6-201ENST00000329516 IQSEC2Q5JU85 1478 aa4.35□□□□□ -1.71
RGPD6-201ENST00000329516 COL4A1P02462 1669 aa4.34□□□□□ -1.71
RGPD6-201ENST00000329516 USP19O94966 1318 aa4.34□□□□□ -1.71
RGPD6-201ENST00000329516 DLC1Q96QB1 1528 aa4.34□□□□□ -1.71
RGPD6-201ENST00000329516 GRIN2AQ12879 1464 aa4.34□□□□□ -1.71
RGPD6-201ENST00000329516 MIER1Q8N108 512 aa4.34□□□□□ -1.72
RGPD6-201ENST00000329516 CSRNP3Q8WYN3 585 aa4.34□□□□□ -1.72
RGPD6-201ENST00000329516 COL12A1Q99715 3063 aa4.34□□□□□ -1.72
RGPD6-201ENST00000329516 PTPRTO14522 1441 aa4.33□□□□□ -1.72
RGPD6-201ENST00000329516 CASZ1Q86V15 1759 aa4.33□□□□□ -1.72
RGPD6-201ENST00000329516 WASHC2AQ641Q2 1341 aa4.33□□□□□ -1.72
RGPD6-201ENST00000329516 A2MP01023 1474 aa4.33□□□□□ -1.72
RGPD6-201ENST00000329516 ABCC1P33527 1531 aa4.33□□□□□ -1.72
RGPD6-201ENST00000329516 TRIM26Q12899 539 aaPredicted RBP4.32□□□□□ -1.72
RGPD6-201ENST00000329516 LMO7Q8WWI1 1683 aa4.32□□□□□ -1.72
RGPD6-201ENST00000329516 AEBP2Q6ZN18 517 aaPredicted RBP4.32□□□□□ -1.72
RGPD6-201ENST00000329516 YEATS2Q9ULM3 1422 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms