RNA–Protein interactions for RNA: ENST00000317376.8

SPOCK2-201, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SPOCK2, Length 5,328 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK2-201ENST00000317376 TRIM44Q96DX7 344 aaPredicted RBP17.23■□□□□ 0.35
SPOCK2-201ENST00000317376 ABCA10Q8WWZ4 1543 aa17.22■□□□□ 0.35
SPOCK2-201ENST00000317376 SUPT6HQ7KZ85 1726 aaKnown RBP17.22■□□□□ 0.35
SPOCK2-201ENST00000317376 UNC13AQ9UPW8 1703 aa17.21■□□□□ 0.35
SPOCK2-201ENST00000317376 HDGFL2Q7Z4V5 671 aaPredicted RBP17.21■□□□□ 0.35
SPOCK2-201ENST00000317376 PANK3Q9H999 370 aa17.21■□□□□ 0.35
SPOCK2-201ENST00000317376 ANKRD50Q9ULJ7 1429 aa17.21■□□□□ 0.35
SPOCK2-201ENST00000317376 CDK11BP21127 795 aaKnown RBP17.21■□□□□ 0.34
SPOCK2-201ENST00000317376 PIP4K2BP78356 416 aa17.2■□□□□ 0.34
SPOCK2-201ENST00000317376 PCF11O94913 1555 aaKnown RBP17.2■□□□□ 0.34
SPOCK2-201ENST00000317376 MRC2Q9UBG0 1479 aa17.2■□□□□ 0.34
SPOCK2-201ENST00000317376 WASHC2AQ641Q2 1341 aa17.2■□□□□ 0.34
SPOCK2-201ENST00000317376 IPO9Q96P70 1041 aaKnown RBP17.2■□□□□ 0.34
SPOCK2-201ENST00000317376 CUL7Q14999 1698 aa17.2■□□□□ 0.34
SPOCK2-201ENST00000317376 DEKP35659 375 aaKnown RBP17.19■□□□□ 0.34
SPOCK2-201ENST00000317376 GLIPR1L2Q4G1C9 344 aa17.18■□□□□ 0.34
SPOCK2-201ENST00000317376 IFT140Q96RY7 1462 aa17.17■□□□□ 0.34
SPOCK2-201ENST00000317376 IPO8O15397 1037 aaKnown RBP17.17■□□□□ 0.34
SPOCK2-201ENST00000317376 STK26Q9P289 416 aa17.17■□□□□ 0.34
SPOCK2-201ENST00000317376 U2AF1L5P0DN76 240 aaPredicted RBP17.16■□□□□ 0.34
SPOCK2-201ENST00000317376 RRP1P56182 461 aaKnown RBP17.16■□□□□ 0.34
SPOCK2-201ENST00000317376 U2AF1Q01081 240 aaKnown RBP eCLIP17.16■□□□□ 0.34
SPOCK2-201ENST00000317376 OS9Q13438 667 aaPredicted RBP17.16■□□□□ 0.34
SPOCK2-201ENST00000317376 RWDD1Q9H446 243 aaPredicted RBP17.16■□□□□ 0.34
SPOCK2-201ENST00000317376 TAOK2Q9UL54 1235 aa17.16■□□□□ 0.34
SPOCK2-201ENST00000317376 EVA1CP58658 441 aa17.15■□□□□ 0.34
SPOCK2-201ENST00000317376 ZRSR1Q15695 479 aaKnown RBP17.15■□□□□ 0.34
SPOCK2-201ENST00000317376 WDR97A6NE52 1622 aa17.15■□□□□ 0.34
SPOCK2-201ENST00000317376 PMFBP1Q8TBY8 1022 aa17.15■□□□□ 0.34
SPOCK2-201ENST00000317376 CALD1Q05682 793 aaKnown RBP17.14■□□□□ 0.33
SPOCK2-201ENST00000317376 HSCBQ8IWL3 235 aa17.14■□□□□ 0.33
SPOCK2-201ENST00000317376 PTMAP06454 111 aaKnown RBP17.13■□□□□ 0.33
SPOCK2-201ENST00000317376 HSP90AB1P08238 724 aaKnown RBP17.13■□□□□ 0.33
SPOCK2-201ENST00000317376 CFAP44Q96MT7 982 aa17.13■□□□□ 0.33
SPOCK2-201ENST00000317376 FANCIQ9NVI1 1328 aa17.13■□□□□ 0.33
SPOCK2-201ENST00000317376 CCDC146Q8IYE0 955 aa17.12■□□□□ 0.33
SPOCK2-201ENST00000317376 CENPJQ9HC77 1338 aaPredicted RBP17.12■□□□□ 0.33
SPOCK2-201ENST00000317376 STAC3Q96MF2 364 aa17.11■□□□□ 0.33
SPOCK2-201ENST00000317376 WASHC2CQ9Y4E1 1318 aa17.11■□□□□ 0.33
SPOCK2-201ENST00000317376 TERF2IPQ9NYB0 399 aa17.11■□□□□ 0.33
SPOCK2-201ENST00000317376 G3V3G9 751 aa17.1■□□□□ 0.33
SPOCK2-201ENST00000317376 DCAF8Q5TAQ9 597 aa17.1■□□□□ 0.33
SPOCK2-201ENST00000317376 DAPK1P53355 1430 aa17.1■□□□□ 0.33
SPOCK2-201ENST00000317376 KIAA1107Q9UPP5 1409 aa17.1■□□□□ 0.33
SPOCK2-201ENST00000317376 ATF3P18847 181 aa17.1■□□□□ 0.33
SPOCK2-201ENST00000317376 FGD1P98174 961 aa17.1■□□□□ 0.33
SPOCK2-201ENST00000317376 TROQ12816 1431 aaPredicted RBP17.09■□□□□ 0.33
SPOCK2-201ENST00000317376 NAIPQ13075 1403 aa17.09■□□□□ 0.33
SPOCK2-201ENST00000317376 KCNJ4P48050 445 aa17.09■□□□□ 0.33
SPOCK2-201ENST00000317376 LAMC3Q9Y6N6 1575 aa17.09■□□□□ 0.33
SPOCK2-201ENST00000317376 SYNJ2O15056 1496 aa17.09■□□□□ 0.33
SPOCK2-201ENST00000317376 BRD4O60885 1362 aaPredicted RBP17.08■□□□□ 0.33
SPOCK2-201ENST00000317376 CENPQQ7L2Z9 268 aaPredicted RBP17.08■□□□□ 0.33
SPOCK2-201ENST00000317376 EPRSP07814 1512 aaKnown RBP17.07■□□□□ 0.32
SPOCK2-201ENST00000317376 EXOC6Q8TAG9 804 aa17.07■□□□□ 0.32
SPOCK2-201ENST00000317376 ROCK1Q13464 1354 aa17.07■□□□□ 0.32
SPOCK2-201ENST00000317376 ITPRIPQ8IWB1 547 aa17.06■□□□□ 0.32
SPOCK2-201ENST00000317376 E9PSI1 815 aa17.06■□□□□ 0.32
SPOCK2-201ENST00000317376 PLCB2Q00722 1185 aa17.06■□□□□ 0.32
SPOCK2-201ENST00000317376 L1TD1Q5T7N2 865 aaKnown RBP17.05■□□□□ 0.32
SPOCK2-201ENST00000317376 NGEFQ8N5V2 710 aa17.05■□□□□ 0.32
SPOCK2-201ENST00000317376 ZNF330Q9Y3S2 320 aaPredicted RBP17.05■□□□□ 0.32
SPOCK2-201ENST00000317376 IQGAP2Q13576 1575 aa17.05■□□□□ 0.32
SPOCK2-201ENST00000317376 TULP1O00294 542 aaPredicted RBP17.05■□□□□ 0.32
SPOCK2-201ENST00000317376 NAP1L2Q9ULW6 460 aaPredicted RBP17.05■□□□□ 0.32
SPOCK2-201ENST00000317376 PPP1R1BQ9UD71 204 aaPredicted RBP17.04■□□□□ 0.32
SPOCK2-201ENST00000317376 TRAK1Q9UPV9 953 aa17.04■□□□□ 0.32
SPOCK2-201ENST00000317376 C9orf84Q5VXU9 1444 aa17.04■□□□□ 0.32
SPOCK2-201ENST00000317376 PTPN23Q9H3S7 1636 aa17.04■□□□□ 0.32
SPOCK2-201ENST00000317376 DNTTIP2Q5QJE6 756 aaKnown RBP17.04■□□□□ 0.32
SPOCK2-201ENST00000317376 ARHGAP5Q13017 1502 aa17.04■□□□□ 0.32
SPOCK2-201ENST00000317376 SNAPC4Q5SXM2 1469 aa17.03■□□□□ 0.32
SPOCK2-201ENST00000317376 SMC4Q9NTJ3 1288 aa17.03■□□□□ 0.32
SPOCK2-201ENST00000317376 DMRT2Q9Y5R5 561 aa17.03■□□□□ 0.32
SPOCK2-201ENST00000317376 PDE4AP27815 886 aa17.03■□□□□ 0.32
SPOCK2-201ENST00000317376 NGDNQ8NEJ9 315 aaKnown RBP17.03■□□□□ 0.32
SPOCK2-201ENST00000317376 PRG4Q92954 1404 aaPredicted RBP17.02■□□□□ 0.32
SPOCK2-201ENST00000317376 RTF1Q92541 710 aaKnown RBP17.02■□□□□ 0.32
SPOCK2-201ENST00000317376 CRBNQ96SW2 442 aa17.02■□□□□ 0.32
SPOCK2-201ENST00000317376 KIAA0586Q9BVV6 1533 aa17.02■□□□□ 0.31
SPOCK2-201ENST00000317376 CGNL1Q0VF96 1302 aa17.02■□□□□ 0.31
SPOCK2-201ENST00000317376 CDK13Q14004 1512 aaKnown RBP17.01■□□□□ 0.31
SPOCK2-201ENST00000317376 APBB1O00213 710 aa17.01■□□□□ 0.31
SPOCK2-201ENST00000317376 NBPF8Q3BBV2 869 aa17.01■□□□□ 0.31
SPOCK2-201ENST00000317376 EVC2Q86UK5 1308 aa17■□□□□ 0.31
SPOCK2-201ENST00000317376 VGFO15240 615 aaPredicted RBP17■□□□□ 0.31
SPOCK2-201ENST00000317376 PLIN1O60240 522 aa17■□□□□ 0.31
SPOCK2-201ENST00000317376 DNAJC5BQ9UF47 199 aa17■□□□□ 0.31
SPOCK2-201ENST00000317376 PLEKHH2Q8IVE3 1493 aa16.99■□□□□ 0.31
SPOCK2-201ENST00000317376 NUTM2BA6NNL0 878 aaPredicted RBP16.99■□□□□ 0.31
SPOCK2-201ENST00000317376 NUTM2EB1AL46 878 aaPredicted RBP16.99■□□□□ 0.31
SPOCK2-201ENST00000317376 NUTM2AQ8IVF1 878 aaPredicted RBP16.99■□□□□ 0.31
SPOCK2-201ENST00000317376 GTF2E1P29083 439 aaPredicted RBP16.99■□□□□ 0.31
SPOCK2-201ENST00000317376 FAM161AQ3B820 660 aa16.99■□□□□ 0.31
SPOCK2-201ENST00000317376 SPRYD3Q8NCJ5 442 aa16.98■□□□□ 0.31
SPOCK2-201ENST00000317376 PTMSP20962 102 aa16.97■□□□□ 0.31
SPOCK2-201ENST00000317376 MCCP23508 829 aa16.97■□□□□ 0.31
SPOCK2-201ENST00000317376 LMOD3Q0VAK6 560 aa16.97■□□□□ 0.31
SPOCK2-201ENST00000317376 NUTM2DQ5VT03 806 aaPredicted RBP16.97■□□□□ 0.31
SPOCK2-201ENST00000317376 USP35Q9P2H5 1018 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms