RNA–Protein interactions for RNA: ENST00000316099.8

HNF4A-201, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HNF4A, Length 6,445 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-201ENST00000316099 ABCC2Q92887 1545 aa14.13□□□□□ -0.15
HNF4A-201ENST00000316099 ABCA8O94911 1581 aa14.13□□□□□ -0.15
HNF4A-201ENST00000316099 TMF1P82094 1093 aa14.13□□□□□ -0.15
HNF4A-201ENST00000316099 FAM69CQ0P6D2 419 aa14.12□□□□□ -0.15
HNF4A-201ENST00000316099 USP47Q96K76 1375 aa14.12□□□□□ -0.15
HNF4A-201ENST00000316099 SCAPERQ9BY12 1400 aa14.11□□□□□ -0.15
HNF4A-201ENST00000316099 ANKRD30BQ9BXX2 1392 aa14.11□□□□□ -0.15
HNF4A-201ENST00000316099 CDCA8Q53HL2 280 aa14.11□□□□□ -0.15
HNF4A-201ENST00000316099 PPP4R2Q9NY27 417 aa14.11□□□□□ -0.15
HNF4A-201ENST00000316099 SYCP2Q9BX26 1530 aa14.1□□□□□ -0.15
HNF4A-201ENST00000316099 NBPF8Q3BBV2 869 aa14.1□□□□□ -0.15
HNF4A-201ENST00000316099 ARXQ96QS3 562 aa14.1□□□□□ -0.15
HNF4A-201ENST00000316099 NOP58Q9Y2X3 529 aaKnown RBP14.1□□□□□ -0.15
HNF4A-201ENST00000316099 TRIM44Q96DX7 344 aaPredicted RBP14.09□□□□□ -0.15
HNF4A-201ENST00000316099 ST20-MTHFSA0A0A6YYL1 179 aa14.09□□□□□ -0.15
HNF4A-201ENST00000316099 ERICH6BQ5W0A0 696 aa14.09□□□□□ -0.15
HNF4A-201ENST00000316099 TRHP20396 242 aaPredicted RBP14.09□□□□□ -0.15
HNF4A-201ENST00000316099 CC2D1BQ5T0F9 858 aaKnown RBP14.09□□□□□ -0.15
HNF4A-201ENST00000316099 KNSTRNQ9Y448 316 aa14.08□□□□□ -0.16
HNF4A-201ENST00000316099 GCC2Q8IWJ2 1684 aa14.07□□□□□ -0.16
HNF4A-201ENST00000316099 PLCH2O75038 1416 aa14.07□□□□□ -0.16
HNF4A-201ENST00000316099 ADGRL1O94910 1474 aa14.06□□□□□ -0.16
HNF4A-201ENST00000316099 FANCAO15360 1455 aa14.05□□□□□ -0.16
HNF4A-201ENST00000316099 NUTM2DQ5VT03 806 aaPredicted RBP14.05□□□□□ -0.16
HNF4A-201ENST00000316099 WDR7Q9Y4E6 1490 aa14.05□□□□□ -0.16
HNF4A-201ENST00000316099 WASHC2AQ641Q2 1341 aa14.04□□□□□ -0.16
HNF4A-201ENST00000316099 CD109Q6YHK3 1445 aa14.04□□□□□ -0.16
HNF4A-201ENST00000316099 ASXL2Q76L83 1435 aa14.04□□□□□ -0.16
HNF4A-201ENST00000316099 A0A0G2JS52 829 aa14.04□□□□□ -0.16
HNF4A-201ENST00000316099 ERCC6L2Q5T890 1561 aa14.04□□□□□ -0.16
HNF4A-201ENST00000316099 ADGBQ8N7X0 1667 aa14.04□□□□□ -0.16
HNF4A-201ENST00000316099 C14orf37Q86TY3 774 aa14.04□□□□□ -0.16
HNF4A-201ENST00000316099 CCDC7Q96M83 1385 aa14.03□□□□□ -0.16
HNF4A-201ENST00000316099 RPRD2Q5VT52 1461 aaKnown RBP14.02□□□□□ -0.16
HNF4A-201ENST00000316099 GOLGA6L22H0YM25 854 aa14.02□□□□□ -0.16
HNF4A-201ENST00000316099 RAPGEF3O95398 923 aa14.02□□□□□ -0.17
HNF4A-201ENST00000316099 KIF7Q2M1P5 1343 aa14.02□□□□□ -0.17
HNF4A-201ENST00000316099 SHANK2Q9UPX8 1470 aa14.01□□□□□ -0.17
HNF4A-201ENST00000316099 KDM6BO15054 1643 aa14.01□□□□□ -0.17
HNF4A-201ENST00000316099 ABCC10Q5T3U5 1492 aa14.01□□□□□ -0.17
HNF4A-201ENST00000316099 TNNT2P45379 298 aaPredicted RBP14□□□□□ -0.17
HNF4A-201ENST00000316099 SAFB2Q14151 953 aaKnown RBP eCLIP14□□□□□ -0.17
HNF4A-201ENST00000316099 POGKQ9P215 609 aa14□□□□□ -0.17
HNF4A-201ENST00000316099 EIF3AQ14152 1382 aaKnown RBP14□□□□□ -0.17
HNF4A-201ENST00000316099 STK26Q9P289 416 aa13.99□□□□□ -0.17
HNF4A-201ENST00000316099 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.99□□□□□ -0.17
HNF4A-201ENST00000316099 MYO5CQ9NQX4 1742 aa13.99□□□□□ -0.17
HNF4A-201ENST00000316099 ADGRL2O95490 1459 aa13.98□□□□□ -0.17
HNF4A-201ENST00000316099 MYH16Q9H6N6 1097 aa13.98□□□□□ -0.17
HNF4A-201ENST00000316099 TRAPPC8Q9Y2L5 1435 aa13.98□□□□□ -0.17
HNF4A-201ENST00000316099 KTN1Q86UP2 1357 aaKnown RBP13.98□□□□□ -0.17
HNF4A-201ENST00000316099 CNTLNQ9NXG0 1405 aa13.98□□□□□ -0.17
HNF4A-201ENST00000316099 ZCCHC11Q5TAX3 1644 aaKnown RBP13.97□□□□□ -0.17
HNF4A-201ENST00000316099 ADCY10Q96PN6 1610 aa13.97□□□□□ -0.17
HNF4A-201ENST00000316099 DUOX2Q9NRD8 1548 aa13.97□□□□□ -0.17
HNF4A-201ENST00000316099 CDC42BPAQ5VT25 1732 aa13.97□□□□□ -0.17
HNF4A-201ENST00000316099 DEKP35659 375 aaKnown RBP13.96□□□□□ -0.17
HNF4A-201ENST00000316099 NBPF1Q3BBV0 1214 aa13.96□□□□□ -0.17
HNF4A-201ENST00000316099 PRKRIP1Q9H875 184 aaPredicted RBP13.96□□□□□ -0.17
HNF4A-201ENST00000316099 NCLP19338 710 aaKnown RBP13.96□□□□□ -0.17
HNF4A-201ENST00000316099 PZPP20742 1482 aa13.96□□□□□ -0.18
HNF4A-201ENST00000316099 TTC37Q6PGP7 1564 aa13.96□□□□□ -0.18
HNF4A-201ENST00000316099 RBM19Q9Y4C8 960 aaKnown RBP13.95□□□□□ -0.18
HNF4A-201ENST00000316099 SAMD9LQ8IVG5 1584 aa13.95□□□□□ -0.18
HNF4A-201ENST00000316099 FAM135AQ9P2D6 1515 aa13.94□□□□□ -0.18
HNF4A-201ENST00000316099 TRAK1Q9UPV9 953 aa13.94□□□□□ -0.18
HNF4A-201ENST00000316099 NAP1L5Q96NT1 182 aaPredicted RBP13.94□□□□□ -0.18
HNF4A-201ENST00000316099 LAS1LQ9Y4W2 734 aaKnown RBP13.94□□□□□ -0.18
HNF4A-201ENST00000316099 RALBP1Q15311 655 aa13.94□□□□□ -0.18
HNF4A-201ENST00000316099 PREX2Q70Z35 1606 aa13.94□□□□□ -0.18
HNF4A-201ENST00000316099 UHRF1BP1LA0JNW5 1464 aa13.93□□□□□ -0.18
HNF4A-201ENST00000316099 ERBINQ96RT1 1412 aa13.93□□□□□ -0.18
HNF4A-201ENST00000316099 ARHGEF5Q12774 1597 aa13.93□□□□□ -0.18
HNF4A-201ENST00000316099 PANK3Q9H999 370 aa13.92□□□□□ -0.18
HNF4A-201ENST00000316099 SRPK2P78362 688 aaKnown RBP13.92□□□□□ -0.18
HNF4A-201ENST00000316099 RTN4Q9NQC3 1192 aaKnown RBP13.92□□□□□ -0.18
HNF4A-201ENST00000316099 KDM5BQ9UGL1 1544 aa13.9□□□□□ -0.18
HNF4A-201ENST00000316099 C11orf95C9JLR9 678 aaPredicted RBP13.9□□□□□ -0.19
HNF4A-201ENST00000316099 VGFO15240 615 aaPredicted RBP13.89□□□□□ -0.19
HNF4A-201ENST00000316099 MBD5Q9P267 1494 aa13.89□□□□□ -0.19
HNF4A-201ENST00000316099 HDGFP51858 240 aaKnown RBP13.89□□□□□ -0.19
HNF4A-201ENST00000316099 STAC3Q96MF2 364 aa13.89□□□□□ -0.19
HNF4A-201ENST00000316099 DHX29Q7Z478 1369 aaKnown RBP13.88□□□□□ -0.19
HNF4A-201ENST00000316099 CLASP1Q7Z460 1538 aa13.88□□□□□ -0.19
HNF4A-201ENST00000316099 L1TD1Q5T7N2 865 aaKnown RBP13.87□□□□□ -0.19
HNF4A-201ENST00000316099 DENND4BO75064 1496 aaPredicted RBP13.87□□□□□ -0.19
HNF4A-201ENST00000316099 PTMAP06454 111 aaKnown RBP13.87□□□□□ -0.19
HNF4A-201ENST00000316099 CFAP70Q5T0N1 1121 aa13.87□□□□□ -0.19
HNF4A-201ENST00000316099 MYBBP1AQ9BQG0 1328 aaKnown RBP13.86□□□□□ -0.19
HNF4A-201ENST00000316099 ZNF518AQ6AHZ1 1483 aa13.86□□□□□ -0.19
HNF4A-201ENST00000316099 SHROOM2Q13796 1616 aa13.86□□□□□ -0.19
HNF4A-201ENST00000316099 CROCC2H7BZ55 1655 aa13.85□□□□□ -0.19
HNF4A-201ENST00000316099 CFAP53Q96M91 514 aa13.85□□□□□ -0.19
HNF4A-201ENST00000316099 B4GALNT3Q6L9W6 998 aa13.85□□□□□ -0.19
HNF4A-201ENST00000316099 MORC1Q86VD1 984 aa13.85□□□□□ -0.19
HNF4A-201ENST00000316099 CDC42BPBQ9Y5S2 1711 aa13.84□□□□□ -0.19
HNF4A-201ENST00000316099 RTEL1-TNFRSF6BF6WH68 1400 aa13.84□□□□□ -0.19
HNF4A-201ENST00000316099 TSHZ2Q9NRE2 1034 aa13.84□□□□□ -0.19
HNF4A-201ENST00000316099 TMEM132EQ6IEE7 984 aa13.83□□□□□ -0.19
HNF4A-201ENST00000316099 NLRP13Q86W25 1043 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms