RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 PHF14O94880 888 aa7.78□□□□□ -1.16
SMCO3-201ENST00000316048 PCDHGA4Q9Y5G9 962 aa7.78□□□□□ -1.16
SMCO3-201ENST00000316048 HOMEZQ8IX15 550 aa7.78□□□□□ -1.16
SMCO3-201ENST00000316048 ZMYND15Q9H091 742 aa7.77□□□□□ -1.17
SMCO3-201ENST00000316048 MDM2Q00987 491 aaPredicted RBP7.76□□□□□ -1.17
SMCO3-201ENST00000316048 SLAIN1Q8ND83 568 aa7.76□□□□□ -1.17
SMCO3-201ENST00000316048 KDM4FA0A1W2PPD8 638 aa7.75□□□□□ -1.17
SMCO3-201ENST00000316048 EPAS1Q99814 870 aa7.75□□□□□ -1.17
SMCO3-201ENST00000316048 TMUB1Q9BVT8 246 aa7.75□□□□□ -1.17
SMCO3-201ENST00000316048 KHSRPQ92945 711 aaKnown RBP eCLIP7.74□□□□□ -1.17
SMCO3-201ENST00000316048 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.73□□□□□ -1.17
SMCO3-201ENST00000316048 TYW1BQ6NUM6 668 aa7.73□□□□□ -1.17
SMCO3-201ENST00000316048 C1orf115Q9H7X2 142 aa7.73□□□□□ -1.17
SMCO3-201ENST00000316048 PADI6Q6TGC4 694 aa7.72□□□□□ -1.17
SMCO3-201ENST00000316048 ONECUT3O60422 494 aaPredicted RBP7.72□□□□□ -1.17
SMCO3-201ENST00000316048 JPH4Q96JJ6 628 aa7.72□□□□□ -1.17
SMCO3-201ENST00000316048 RSPH6AQ9H0K4 717 aa7.72□□□□□ -1.17
SMCO3-201ENST00000316048 GPCPD1Q9NPB8 672 aa7.72□□□□□ -1.17
SMCO3-201ENST00000316048 NUDT7P0C024 238 aa7.7□□□□□ -1.18
SMCO3-201ENST00000316048 FOSBP53539 338 aa7.7□□□□□ -1.18
SMCO3-201ENST00000316048 METTL3Q86U44 580 aaKnown RBP7.7□□□□□ -1.18
SMCO3-201ENST00000316048 ARID3CA6NKF2 412 aa7.7□□□□□ -1.18
SMCO3-201ENST00000316048 POTEJP0CG39 1038 aa7.7□□□□□ -1.18
SMCO3-201ENST00000316048 CLCN1P35523 988 aa7.7□□□□□ -1.18
SMCO3-201ENST00000316048 GOPCQ9HD26 462 aa7.7□□□□□ -1.18
SMCO3-201ENST00000316048 UBTFP17480 764 aaKnown RBP7.69□□□□□ -1.18
SMCO3-201ENST00000316048 SSTR3P32745 418 aaPredicted RBP7.69□□□□□ -1.18
SMCO3-201ENST00000316048 ZNF454Q8N9F8 522 aa7.69□□□□□ -1.18
SMCO3-201ENST00000316048 C6orf132Q5T0Z8 1188 aa7.69□□□□□ -1.18
SMCO3-201ENST00000316048 FBXW7Q969H0 707 aa7.68□□□□□ -1.18
SMCO3-201ENST00000316048 ARID3AQ99856 593 aa7.68□□□□□ -1.18
SMCO3-201ENST00000316048 BEGAINQ9BUH8 593 aa7.68□□□□□ -1.18
SMCO3-201ENST00000316048 ADAM33Q9BZ11 813 aa7.68□□□□□ -1.18
SMCO3-201ENST00000316048 ADGRG1Q9Y653 693 aa7.68□□□□□ -1.18
SMCO3-201ENST00000316048 ARSIQ5FYB1 569 aa7.67□□□□□ -1.18
SMCO3-201ENST00000316048 SH3D19Q5HYK7 790 aa7.67□□□□□ -1.18
SMCO3-201ENST00000316048 CLUAP1Q96AJ1 413 aa7.67□□□□□ -1.18
SMCO3-201ENST00000316048 PCMTD1Q96MG8 357 aaPredicted RBP7.67□□□□□ -1.18
SMCO3-201ENST00000316048 FAM217BQ9NTX9 383 aaPredicted RBP7.67□□□□□ -1.18
SMCO3-201ENST00000316048 PROCA1Q8NCQ7 364 aaPredicted RBP7.67□□□□□ -1.18
SMCO3-201ENST00000316048 PXYLP1Q8TE99 480 aa7.67□□□□□ -1.18
SMCO3-201ENST00000316048 HOXB3P14651 431 aaPredicted RBP7.66□□□□□ -1.18
SMCO3-201ENST00000316048 ZDHHC16Q969W1 377 aa7.66□□□□□ -1.18
SMCO3-201ENST00000316048 POLR3EQ9NVU0 708 aa7.66□□□□□ -1.18
SMCO3-201ENST00000316048 POTEB2H3BUK9 544 aa7.64□□□□□ -1.19
SMCO3-201ENST00000316048 TTC13Q8NBP0 860 aa7.64□□□□□ -1.19
SMCO3-201ENST00000316048 FAM198AQ9UFP1 575 aa7.64□□□□□ -1.19
SMCO3-201ENST00000316048 FLIIQ13045 1269 aa7.64□□□□□ -1.19
SMCO3-201ENST00000316048 SP7Q8TDD2 431 aaPredicted RBP7.64□□□□□ -1.19
SMCO3-201ENST00000316048 MCM6Q14566 821 aa7.63□□□□□ -1.19
SMCO3-201ENST00000316048 FBXO31Q5XUX0 539 aaPredicted RBP7.63□□□□□ -1.19
SMCO3-201ENST00000316048 C3orf80F5H4A9 247 aa7.63□□□□□ -1.19
SMCO3-201ENST00000316048 OATP04181 439 aa7.62□□□□□ -1.19
SMCO3-201ENST00000316048 COL9A1P20849 921 aa7.62□□□□□ -1.19
SMCO3-201ENST00000316048 SKIV2LQ15477 1246 aaKnown RBP7.62□□□□□ -1.19
SMCO3-201ENST00000316048 MYSM1Q5VVJ2 828 aa7.62□□□□□ -1.19
SMCO3-201ENST00000316048 GPR153Q6NV75 609 aa7.62□□□□□ -1.19
SMCO3-201ENST00000316048 CDCA7LQ96GN5 454 aa7.62□□□□□ -1.19
SMCO3-201ENST00000316048 APBB1O00213 710 aa7.61□□□□□ -1.19
SMCO3-201ENST00000316048 PRSS12P56730 875 aa7.61□□□□□ -1.19
SMCO3-201ENST00000316048 CERKQ8TCT0 537 aa7.61□□□□□ -1.19
SMCO3-201ENST00000316048 ATP1B4Q9UN42 357 aaPredicted RBP7.61□□□□□ -1.19
SMCO3-201ENST00000316048 POM121Q96HA1 1249 aa7.6□□□□□ -1.19
SMCO3-201ENST00000316048 LHX6Q9UPM6 363 aa7.6□□□□□ -1.19
SMCO3-201ENST00000316048 DOK7Q18PE1 504 aa7.59□□□□□ -1.19
SMCO3-201ENST00000316048 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.59□□□□□ -1.19
SMCO3-201ENST00000316048 RBM27Q9P2N5 1060 aaKnown RBP7.59□□□□□ -1.19
SMCO3-201ENST00000316048 TSKSQ9UJT2 592 aa7.58□□□□□ -1.2
SMCO3-201ENST00000316048 TBC1D2Q9BYX2 928 aa7.58□□□□□ -1.2
SMCO3-201ENST00000316048 LIMD1Q9UGP4 676 aa7.58□□□□□ -1.2
SMCO3-201ENST00000316048 CLK2P49760 499 aaKnown RBP7.57□□□□□ -1.2
SMCO3-201ENST00000316048 RCCD1A6NED2 376 aa7.57□□□□□ -1.2
SMCO3-201ENST00000316048 RBM46Q8TBY0 533 aaKnown RBP7.56□□□□□ -1.2
SMCO3-201ENST00000316048 TRAK2O60296 914 aa7.55□□□□□ -1.2
SMCO3-201ENST00000316048 EYA1Q99502 592 aa7.55□□□□□ -1.2
SMCO3-201ENST00000316048 A6NJR5 290 aa7.55□□□□□ -1.2
SMCO3-201ENST00000316048 NUDT18Q6ZVK8 323 aa7.54□□□□□ -1.2
SMCO3-201ENST00000316048 ZNF710Q8N1W2 664 aa7.54□□□□□ -1.2
SMCO3-201ENST00000316048 CCDC82Q8N4S0 544 aa7.54□□□□□ -1.2
SMCO3-201ENST00000316048 BCL2L12Q9HB09 334 aa7.54□□□□□ -1.2
SMCO3-201ENST00000316048 SMAPO00193 183 aa7.54□□□□□ -1.2
SMCO3-201ENST00000316048 SPIRE2Q8WWL2 714 aa7.54□□□□□ -1.2
SMCO3-201ENST00000316048 ZSWIM6Q9HCJ5 1215 aa7.54□□□□□ -1.2
SMCO3-201ENST00000316048 SNRKQ9NRH2 765 aa7.54□□□□□ -1.2
SMCO3-201ENST00000316048 RIMBP2O15034 1052 aa7.53□□□□□ -1.2
SMCO3-201ENST00000316048 RFC5P40937 340 aa7.53□□□□□ -1.2
SMCO3-201ENST00000316048 PPP4R3BQ5MIZ7 849 aa7.53□□□□□ -1.2
SMCO3-201ENST00000316048 CD46P15529 392 aa7.52□□□□□ -1.2
SMCO3-201ENST00000316048 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.52□□□□□ -1.21
SMCO3-201ENST00000316048 PROX2Q3B8N5 592 aa7.52□□□□□ -1.21
SMCO3-201ENST00000316048 PROSER2Q86WR7 435 aaPredicted RBP7.52□□□□□ -1.21
SMCO3-201ENST00000316048 ZNF777Q9ULD5 760 aaPredicted RBP7.52□□□□□ -1.21
SMCO3-201ENST00000316048 DDX11L8A8MPP1 907 aa7.51□□□□□ -1.21
SMCO3-201ENST00000316048 PPP1R3GB7ZBB8 358 aa7.51□□□□□ -1.21
SMCO3-201ENST00000316048 CSPP1Q1MSJ5 1256 aa7.51□□□□□ -1.21
SMCO3-201ENST00000316048 RIC3Q7Z5B4 369 aa7.51□□□□□ -1.21
SMCO3-201ENST00000316048 FNBP4Q8N3X1 1017 aaPredicted RBP7.51□□□□□ -1.21
SMCO3-201ENST00000316048 PNMA3Q9UL41 463 aa7.51□□□□□ -1.21
SMCO3-201ENST00000316048 MOXD2PA6NHM9 499 aa7.5□□□□□ -1.21
SMCO3-201ENST00000316048 PTPREP23469 700 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms